| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022874
Identifier: 170022874
GI number: 170022874
Start: 683417
End: 684871
Strand: Direct
Name: 170022874
Synonym: YPK_0623
Alternate gene names: NA
Gene position: 683417-684871 (Clockwise)
Preceding gene: 170022873
Following gene: 170022875
Centisome position: 14.57
GC content: 45.15
Gene sequence:
>1455_bases ATGAGCTTCAACCTGCCCGGAATGTATTTGTATTACCTTTCAAGAGATAATTTGGCCCCCGAAGAATACGAACGGATAAT CAGCCCTCACGCTGCCTGGGCGCGTATCTGCCGCGAATATGAATTTGACGACAATCACAATACCCGCCGTTACCTTATCA ATATGCGGGAGCGTGAACAGCGATTCTCTCCGGATCAGGCACGTCCAGGCGGGATACGTGAAAAAGAGAAACTGGAAAAA CTCGTTTTTTCCGGTGACGTGGTGATGTTAAGTGATATGTACGGCCCTGCCCGGCTGTTCTACATCAATGGTGAAGGTCA GTTGATGTCTGCCGATCCCCATGCTTTCCGTTTCGAGGGTGCTGCGAAGATTATCAAGGCATTTGACGATTCGGTGAAAT GCCGGAACTATCAGCTAACCGGTGGAAAGCCACGGCCAACGAAGATTCAGAGGCTAAGCCGGGGCTATGAATCCCCTGCG GAGCAATACGCACAGGCAGCAAAAAAACGGCCAACACCATCCTCTTACCTCACTGGGGATAAACCTGATCTGGGGTTTGT TCCGGACTATCCAGTATTACGTAATACCCATAATCTACCGGATGAAGCTTTGCGCGCTATGCTGGCAAAAAACAATCAGG ACGTGATGTTACTGACATTAGGTGAATGCTTCGAGATCGTGACTTCATGGGGTTCATGGAAAAGGGGCTGGGTGAGTTTC AGTGAATCAAAAATAGGTCAGATTGCAATAGATTATGGAGTAAATTACGGGGTGAACGGAAAGGATGTTGTGACCACCTC AATGATAATCAGCCAACTGGGGAGTTTCGGAATAAGGGCCACGACGTATATAAACCACAAGGGCACAGAATTGATAAAAA TCAGTGGGCATCCGGGGATCAGAAAAATACTCAATGCGCCAGTTTTTGCTGCTAAAAACCCAAAGGTTGTTGATCTGGGT ATTGGTAAGTATGGGCTGACAAAATCAATAGTCAAAGGCGCGAGATTAACGTTTTATGTGGCTGCGGCATATCGAACTAT TGATTTTATACTCAATGATGCGACCTCATTAGCCGAGTATCTTGGCCCGTTAGCCACGGATGTGGTGAAAATCGGTGTGG CGTCTGCAATTAGTTGGGGAGTTGGGACTATAGCTCTAGGGGTTGTTTCTACCGTTGCAGTCCCTTTGGTTGTAGTTGTT ATCGTAGGATTAGTTTCTGCAATTGGTTTAAACTATTTAGATGATAAATTTGGTGTTACAGATAAAGTTGTTAAGTGCAT TGAAGGTGCACAGCAAGAGTTTGTAGAAAAAGCTCGTGAGATGGAAAAAGGGCTTTTGGATTTGGGGGCTATGTATGCAG ATAGGATGCTTGATAAAGGAAAAGAAGTTATTGAGTATGAAGTTAGAAACTATATCAAGGAAGTACTGAGTAACTTTAAC ACCAGGTGGTTTTAA
Upstream 100 bases:
>100_bases TCGGGCCGTGGTTTCTGTGACTGTTCCTTCATTACTAGACGTATAACCATTAAGAAATGTAAGGTGATGCCGGTGCGACT AACTCCACAAGGAATGGGAT
Downstream 100 bases:
>100_bases TGTACGAACTCACATTAAAAAGAAGAATATTTATATTTTTTGGCGTGTTATTTTTATTTATACCTTTAGGTGCTGGAGGT GTATATCTGACTGTAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDNHNTRRYLINMREREQRFSPDQARPGGIREKEKLEK LVFSGDVVMLSDMYGPARLFYINGEGQLMSADPHAFRFEGAAKIIKAFDDSVKCRNYQLTGGKPRPTKIQRLSRGYESPA EQYAQAAKKRPTPSSYLTGDKPDLGFVPDYPVLRNTHNLPDEALRAMLAKNNQDVMLLTLGECFEIVTSWGSWKRGWVSF SESKIGQIAIDYGVNYGVNGKDVVTTSMIISQLGSFGIRATTYINHKGTELIKISGHPGIRKILNAPVFAAKNPKVVDLG IGKYGLTKSIVKGARLTFYVAAAYRTIDFILNDATSLAEYLGPLATDVVKIGVASAISWGVGTIALGVVSTVAVPLVVVV IVGLVSAIGLNYLDDKFGVTDKVVKCIEGAQQEFVEKAREMEKGLLDLGAMYADRMLDKGKEVIEYEVRNYIKEVLSNFN TRWF
Sequences:
>Translated_484_residues MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDNHNTRRYLINMREREQRFSPDQARPGGIREKEKLEK LVFSGDVVMLSDMYGPARLFYINGEGQLMSADPHAFRFEGAAKIIKAFDDSVKCRNYQLTGGKPRPTKIQRLSRGYESPA EQYAQAAKKRPTPSSYLTGDKPDLGFVPDYPVLRNTHNLPDEALRAMLAKNNQDVMLLTLGECFEIVTSWGSWKRGWVSF SESKIGQIAIDYGVNYGVNGKDVVTTSMIISQLGSFGIRATTYINHKGTELIKISGHPGIRKILNAPVFAAKNPKVVDLG IGKYGLTKSIVKGARLTFYVAAAYRTIDFILNDATSLAEYLGPLATDVVKIGVASAISWGVGTIALGVVSTVAVPLVVVV IVGLVSAIGLNYLDDKFGVTDKVVKCIEGAQQEFVEKAREMEKGLLDLGAMYADRMLDKGKEVIEYEVRNYIKEVLSNFN TRWF >Mature_483_residues SFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDNHNTRRYLINMREREQRFSPDQARPGGIREKEKLEKL VFSGDVVMLSDMYGPARLFYINGEGQLMSADPHAFRFEGAAKIIKAFDDSVKCRNYQLTGGKPRPTKIQRLSRGYESPAE QYAQAAKKRPTPSSYLTGDKPDLGFVPDYPVLRNTHNLPDEALRAMLAKNNQDVMLLTLGECFEIVTSWGSWKRGWVSFS ESKIGQIAIDYGVNYGVNGKDVVTTSMIISQLGSFGIRATTYINHKGTELIKISGHPGIRKILNAPVFAAKNPKVVDLGI GKYGLTKSIVKGARLTFYVAAAYRTIDFILNDATSLAEYLGPLATDVVKIGVASAISWGVGTIALGVVSTVAVPLVVVVI VGLVSAIGLNYLDDKFGVTDKVVKCIEGAQQEFVEKAREMEKGLLDLGAMYADRMLDKGKEVIEYEVRNYIKEVLSNFNT RWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54013; Mature: 53882
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDNHNTRRYLINMREREQ CCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHEEEHHHHHH RFSPDQARPGGIREKEKLEKLVFSGDVVMLSDMYGPARLFYINGEGQLMSADPHAFRFEG HCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEECCCCCEEHHH AAKIIKAFDDSVKCRNYQLTGGKPRPTKIQRLSRGYESPAEQYAQAAKKRPTPSSYLTGD HHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC KPDLGFVPDYPVLRNTHNLPDEALRAMLAKNNQDVMLLTLGECFEIVTSWGSWKRGWVSF CCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEE SESKIGQIAIDYGVNYGVNGKDVVTTSMIISQLGSFGIRATTYINHKGTELIKISGHPGI CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCH RKILNAPVFAAKNPKVVDLGIGKYGLTKSIVKGARLTFYVAAAYRTIDFILNDATSLAEY HHHHCCCCEECCCCEEEEECCCCHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHH LGPLATDVVKIGVASAISWGVGTIALGVVSTVAVPLVVVVIVGLVSAIGLNYLDDKFGVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHCCCH DKVVKCIEGAQQEFVEKAREMEKGLLDLGAMYADRMLDKGKEVIEYEVRNYIKEVLSNFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC TRWF CCCC >Mature Secondary Structure SFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDNHNTRRYLINMREREQ CCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHEEEHHHHHH RFSPDQARPGGIREKEKLEKLVFSGDVVMLSDMYGPARLFYINGEGQLMSADPHAFRFEG HCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEECCCCCEEHHH AAKIIKAFDDSVKCRNYQLTGGKPRPTKIQRLSRGYESPAEQYAQAAKKRPTPSSYLTGD HHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC KPDLGFVPDYPVLRNTHNLPDEALRAMLAKNNQDVMLLTLGECFEIVTSWGSWKRGWVSF CCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEE SESKIGQIAIDYGVNYGVNGKDVVTTSMIISQLGSFGIRATTYINHKGTELIKISGHPGI CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCH RKILNAPVFAAKNPKVVDLGIGKYGLTKSIVKGARLTFYVAAAYRTIDFILNDATSLAEY HHHHCCCCEECCCCEEEEECCCCHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHH LGPLATDVVKIGVASAISWGVGTIALGVVSTVAVPLVVVVIVGLVSAIGLNYLDDKFGVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHCCCH DKVVKCIEGAQQEFVEKAREMEKGLLDLGAMYADRMLDKGKEVIEYEVRNYIKEVLSNFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC TRWF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA