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The map label for this gene is 170022873

Identifier: 170022873

GI number: 170022873

Start: 681605

End: 683038

Strand: Direct

Name: 170022873

Synonym: YPK_0622

Alternate gene names: NA

Gene position: 681605-683038 (Clockwise)

Preceding gene: 170022872

Following gene: 170022874

Centisome position: 14.53

GC content: 51.46

Gene sequence:

>1434_bases
ATGACCGCTACAAAGACAGCCACGGTCTACTCGTTACCGTACAAACCGTTGCTTTTAACCGCGTCACATTCAGTCGTGAC
GGATAACCAGATGGGGCCAAGCCAGCGCGGTGAAGTGCTTCTGGCCCGTTATGATGGTGATTTAGCCGTGCATGGTGATT
CGGACGCTGTACACCACTACAACGGCATAATCTGGCAGCCTGTTTCAGATAAGGCACTTTCGCGTGAGATGGCGGCAATA
TTTATAGAGTCGAGGATTCCTTACTCCATGCCAGCCATGAAGAACGCCGTTGATACCATGAAATTGAGCTTGCCAATAAT
GGGTACCACAGCACGTAATCTGATTGGCTTTAGTAACGGTGTATTTGATACCCGAGAGGGATTATTCAGAGAGCATCGCC
AAGAGGACTGGTTATTGATCGCCAGTGATGTGGAATTCATCCAGGCAGAAGAAGGGGAATCACTGGACACCCACTCCCCC
GCGTTCTGGAAGTGGCTTAACTGGTCAACGGCCGGTAATGCCCGAAAAACTGATCGAGTGCTGGCAGCGTTATATATGGT
GATGGCGAACCGGTATGACTGGCAGCTATTTCTTGAGATAACCGGCGCTGGTGGCAGTGGTAAAAGCGTACTGGCGGAGA
TCTGCACCATGCTGGCAGGGAAAGCCAACACCGTATCAGCCAGTATGAAGGCCCTCGAGGAGCCAAGGGAAAGGGCGCTA
ATAGTGGGGTACTCTCTTATCATCATGCCTGATATGTCGCGCTATGCCGGTGACGGGGCAGGGATTAAAGCCATCACAGG
CGGGGATAAGGTCGCGATAGACCCGAAACACAAACCGCCTTACTCAACACGGATCCCGGCTGTTATTTTGGCAGTGAACA
ATAACGCTATGTCATTCAGCGACCGAAGCGGCGGTATATCCCGGCGTCGGGTTATTTTCAATTTCTCGCAGGTGGTGCCG
GAGAATGAGCGGGATCCGATGTTGTCAGAAAAGATAGAGGCAGAGCTGCCAGTTATCATCCGCCACTTACTGACACGCTT
TGCAGATCAGGGAGAGGCTAAACGGCTTTTATTCGAGCAGCAGAAATCAGAAGAGGCGCTGGCTATTAAGCGTGAAGGTG
ATTCGCTGGTGGACTTCTGCGGCTACCTGATGGCATCGGTGCAGTGTGACGGTTTGTTTATCGGTAATGCCAGCATTATA
CCGTTCAGCCCACGGAAGTACCTGTACCACGCCTACCTTGCCTATATGCAGAGTAATGGATTGAGCAAGCCGATCTCGCT
TAACCGGTTCGCTACTGATATGCCGGGTTCAATGGCTGAATATGGAAAAGAGTACATCAGGAAGAAAAGTACCAAAGGAA
ATATGCGCTCCAACATCCGGCTGGCTGATGATGCCGATGAGTGGCTACCGGCTGCAACAGGGGGTACAGAGTAA

Upstream 100 bases:

>100_bases
GCCAAAGGATTGGTTATGACCTCCTTGAATTTGTGCGGCAACATGCAGCAAAAGCGTCGGAAAATATCGAGGGGGTGAAC
TATGCGCGATCCGCTGCCTA

Downstream 100 bases:

>100_bases
AAGTTATTGAATAAGTCTCCACCTGTCTCCACTCAGTAAAATACATATTATAAAACATGTAGTTAATGGGTGGAGACCTT
TAAATAGAGTCTCCACCTAG

Product: P4 family phage/plasmid primase

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase; Bacteriophage P4 DNA Primase; Plasmid And Phage DNA Primase; P4-Specific DNA Primase; DNA Primase Prophage; Phage Primase; Phage DNA Primase; Phage/Plasmid Primase P4 C-Terminal Protein; Phage DNA Primase-Like Protein; Bacteriophage Protein; Nucleoside Triphosphatase D5 Family; D5 N Like Family; P4 Family Phage/Plasmid Primase; Phage/Plasmid Primase; Phage/Plasmid Primase P4-Like Protein; Helicase Superfamily Protein; Nucleic Acid Independent Nucleoside Triphosphatase; Nucleoside Triphosphatase; Alpha Replication I

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MTATKTATVYSLPYKPLLLTASHSVVTDNQMGPSQRGEVLLARYDGDLAVHGDSDAVHHYNGIIWQPVSDKALSREMAAI
FIESRIPYSMPAMKNAVDTMKLSLPIMGTTARNLIGFSNGVFDTREGLFREHRQEDWLLIASDVEFIQAEEGESLDTHSP
AFWKWLNWSTAGNARKTDRVLAALYMVMANRYDWQLFLEITGAGGSGKSVLAEICTMLAGKANTVSASMKALEEPRERAL
IVGYSLIIMPDMSRYAGDGAGIKAITGGDKVAIDPKHKPPYSTRIPAVILAVNNNAMSFSDRSGGISRRRVIFNFSQVVP
ENERDPMLSEKIEAELPVIIRHLLTRFADQGEAKRLLFEQQKSEEALAIKREGDSLVDFCGYLMASVQCDGLFIGNASII
PFSPRKYLYHAYLAYMQSNGLSKPISLNRFATDMPGSMAEYGKEYIRKKSTKGNMRSNIRLADDADEWLPAATGGTE

Sequences:

>Translated_477_residues
MTATKTATVYSLPYKPLLLTASHSVVTDNQMGPSQRGEVLLARYDGDLAVHGDSDAVHHYNGIIWQPVSDKALSREMAAI
FIESRIPYSMPAMKNAVDTMKLSLPIMGTTARNLIGFSNGVFDTREGLFREHRQEDWLLIASDVEFIQAEEGESLDTHSP
AFWKWLNWSTAGNARKTDRVLAALYMVMANRYDWQLFLEITGAGGSGKSVLAEICTMLAGKANTVSASMKALEEPRERAL
IVGYSLIIMPDMSRYAGDGAGIKAITGGDKVAIDPKHKPPYSTRIPAVILAVNNNAMSFSDRSGGISRRRVIFNFSQVVP
ENERDPMLSEKIEAELPVIIRHLLTRFADQGEAKRLLFEQQKSEEALAIKREGDSLVDFCGYLMASVQCDGLFIGNASII
PFSPRKYLYHAYLAYMQSNGLSKPISLNRFATDMPGSMAEYGKEYIRKKSTKGNMRSNIRLADDADEWLPAATGGTE
>Mature_476_residues
TATKTATVYSLPYKPLLLTASHSVVTDNQMGPSQRGEVLLARYDGDLAVHGDSDAVHHYNGIIWQPVSDKALSREMAAIF
IESRIPYSMPAMKNAVDTMKLSLPIMGTTARNLIGFSNGVFDTREGLFREHRQEDWLLIASDVEFIQAEEGESLDTHSPA
FWKWLNWSTAGNARKTDRVLAALYMVMANRYDWQLFLEITGAGGSGKSVLAEICTMLAGKANTVSASMKALEEPRERALI
VGYSLIIMPDMSRYAGDGAGIKAITGGDKVAIDPKHKPPYSTRIPAVILAVNNNAMSFSDRSGGISRRRVIFNFSQVVPE
NERDPMLSEKIEAELPVIIRHLLTRFADQGEAKRLLFEQQKSEEALAIKREGDSLVDFCGYLMASVQCDGLFIGNASIIP
FSPRKYLYHAYLAYMQSNGLSKPISLNRFATDMPGSMAEYGKEYIRKKSTKGNMRSNIRLADDADEWLPAATGGTE

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52759; Mature: 52628

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATKTATVYSLPYKPLLLTASHSVVTDNQMGPSQRGEVLLARYDGDLAVHGDSDAVHHY
CCCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEEEECCCEEEECCCCCHHHC
NGIIWQPVSDKALSREMAAIFIESRIPYSMPAMKNAVDTMKLSLPIMGTTARNLIGFSNG
CCEEEECCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHEEEEEEEECCCHHHHHCCCCC
VFDTREGLFREHRQEDWLLIASDVEFIQAEEGESLDTHSPAFWKWLNWSTAGNARKTDRV
CCHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH
LAALYMVMANRYDWQLFLEITGAGGSGKSVLAEICTMLAGKANTVSASMKALEEPRERAL
HHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCEE
IVGYSLIIMPDMSRYAGDGAGIKAITGGDKVAIDPKHKPPYSTRIPAVILAVNNNAMSFS
EEEEEEEEECCHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEC
DRSGGISRRRVIFNFSQVVPENERDPMLSEKIEAELPVIIRHLLTRFADQGEAKRLLFEQ
CCCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH
QKSEEALAIKREGDSLVDFCGYLMASVQCDGLFIGNASIIPFSPRKYLYHAYLAYMQSNG
HCCCCEEEEECCCCHHHHHHHHHHHHEEECEEEECCCEEECCCCHHHHHHHHHHHHHHCC
LSKPISLNRFATDMPGSMAEYGKEYIRKKSTKGNMRSNIRLADDADEWLPAATGGTE
CCCCEECCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCCCCCCC
>Mature Secondary Structure 
TATKTATVYSLPYKPLLLTASHSVVTDNQMGPSQRGEVLLARYDGDLAVHGDSDAVHHY
CCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEEEECCCEEEECCCCCHHHC
NGIIWQPVSDKALSREMAAIFIESRIPYSMPAMKNAVDTMKLSLPIMGTTARNLIGFSNG
CCEEEECCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHEEEEEEEECCCHHHHHCCCCC
VFDTREGLFREHRQEDWLLIASDVEFIQAEEGESLDTHSPAFWKWLNWSTAGNARKTDRV
CCHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH
LAALYMVMANRYDWQLFLEITGAGGSGKSVLAEICTMLAGKANTVSASMKALEEPRERAL
HHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCEE
IVGYSLIIMPDMSRYAGDGAGIKAITGGDKVAIDPKHKPPYSTRIPAVILAVNNNAMSFS
EEEEEEEEECCHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEC
DRSGGISRRRVIFNFSQVVPENERDPMLSEKIEAELPVIIRHLLTRFADQGEAKRLLFEQ
CCCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH
QKSEEALAIKREGDSLVDFCGYLMASVQCDGLFIGNASIIPFSPRKYLYHAYLAYMQSNG
HCCCCEEEEECCCCHHHHHHHHHHHHEEECEEEECCCEEECCCCHHHHHHHHHHHHHHCC
LSKPISLNRFATDMPGSMAEYGKEYIRKKSTKGNMRSNIRLADDADEWLPAATGGTE
CCCCEECCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA