| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022871
Identifier: 170022871
GI number: 170022871
Start: 681044
End: 681418
Strand: Direct
Name: 170022871
Synonym: YPK_0620
Alternate gene names: NA
Gene position: 681044-681418 (Clockwise)
Preceding gene: 170022870
Following gene: 170022872
Centisome position: 14.52
GC content: 45.07
Gene sequence:
>375_bases ATGTCTAGACACGAGACTAATGAGCTGATGGATATTCTCCTGAAGGCGCAAAAAGCCAGTGCAATAATTCGGGCGCTTAA TTACTCATGGATTGAACTACCGGGATGTGAGGTCGAAGCATTACTTAGTATGTCTTCTGAATATGCTGATTCCGTTACTG AATATCTGATTAACCTTTCTGGTGATAATGGAGAAGGAAGCCCGGCAGTAGGTGACCGTTATACAGAAAATGACGGTGGA AGCGTGGTTATCGTCAGGAAACGTACTGGTGACCGCTTGGTATATTCCTACGAGAAGCACCCAGAAGCTAGCCACGACTA TCGGCTCAGGAGTTTTATTCGTGAATTTACCCTGTCAGAGGTGGTTCATGGATAA
Upstream 100 bases:
>100_bases CCCGCGTGGTCGCTGACCTTTGCTGCAAAAATCCGTACTGAGTGTTCCGTAACTGACCATCGCAGTGGCGTAGTTGTGTT TGACTTAATGGAGGTGCGCC
Downstream 100 bases:
>100_bases GTTAGCCCTTAATGAGGTTTCTGATTTGCTCCATAGCCTGCCTCGTATGTTGGAAGTTGCCCAGTCGCTGACATGTGATC CAGAAGGCCAAAGGATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSRHETNELMDILLKAQKASAIIRALNYSWIELPGCEVEALLSMSSEYADSVTEYLINLSGDNGEGSPAVGDRYTENDGG SVVIVRKRTGDRLVYSYEKHPEASHDYRLRSFIREFTLSEVVHG
Sequences:
>Translated_124_residues MSRHETNELMDILLKAQKASAIIRALNYSWIELPGCEVEALLSMSSEYADSVTEYLINLSGDNGEGSPAVGDRYTENDGG SVVIVRKRTGDRLVYSYEKHPEASHDYRLRSFIREFTLSEVVHG >Mature_123_residues SRHETNELMDILLKAQKASAIIRALNYSWIELPGCEVEALLSMSSEYADSVTEYLINLSGDNGEGSPAVGDRYTENDGGS VVIVRKRTGDRLVYSYEKHPEASHDYRLRSFIREFTLSEVVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13928; Mature: 13796
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHETNELMDILLKAQKASAIIRALNYSWIELPGCEVEALLSMSSEYADSVTEYLINLS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC GDNGEGSPAVGDRYTENDGGSVVIVRKRTGDRLVYSYEKHPEASHDYRLRSFIREFTLSE CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH VVHG HHCC >Mature Secondary Structure SRHETNELMDILLKAQKASAIIRALNYSWIELPGCEVEALLSMSSEYADSVTEYLINLS CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC GDNGEGSPAVGDRYTENDGGSVVIVRKRTGDRLVYSYEKHPEASHDYRLRSFIREFTLSE CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH VVHG HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA