| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yheO [C]
Identifier: 170022853
GI number: 170022853
Start: 667709
End: 668341
Strand: Direct
Name: yheO [C]
Synonym: YPK_0602
Alternate gene names: 170022853
Gene position: 667709-668341 (Clockwise)
Preceding gene: 170022852
Following gene: 170022854
Centisome position: 14.24
GC content: 35.39
Gene sequence:
>633_bases ATGACCCAGGATGAAATTATTAAGTCATGGATACCAATGGTAGAGTTTATCGCTCGCACCTACGGTGAAAATTGTGAGGT GATATTGCACGATTTACGAGATCTAGATAAATCCATTGTGGCCATAAAAAATAATCATATAACTGGTCGCCAGATCGGTG GCACTATTACAGATTTTGCTTTGAAGCTTATCCATGAAAAATCTTGGGAAGAACGTGATTTTATCATTAATTACAAAGGG AGAATTCCTGGGAAATCAGAAAATATCCGTGCTTCAACCTTTTTCATTAAAGATGAAGAGGGTGAAATTATTGCGATGCT CTGTATGAATGTTGATTTAACTTCGTTATCTCTAGCGCATAAAATTATCGGAAACTTAATGTTTATTGAGGAAGATAATA AGAATGATGAGGAAGTACTCAGGAATACATCCATAACGGATATGTTACATGAATTGATTACAGATGTTTTAAAGAACTAC CCTCGTGCACCTTCGTTATTGATTATGGACGAGAAAAAAGAAATCGTTAAAAAACTTAATGAAAAAGGCGTTTTTTTACT TAAAGGGGCAGTTGCTGAGGTGGCGATGCGTCTTGAAACGTCAGAGCAGACAATTTATCGTTATTTAAAATAG
Upstream 100 bases:
>100_bases TAATAAAATGTTATTATGATAATAAATAATATCGCCATTTTAATGGGTTTTAAATTAAAAAGTGCGTTGTGAATATCATA AATAAACGTGGAGAATTGCA
Downstream 100 bases:
>100_bases AGGATATATCATGAAGTCAGTCATTGAAACAAAAAATGCACCTTCCGCTATTGGCCCTTATTCTCAAGCAATTTGTTTTA ATGGGATTCTGTATGCTTCA
Product: YheO domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTQDEIIKSWIPMVEFIARTYGENCEVILHDLRDLDKSIVAIKNNHITGRQIGGTITDFALKLIHEKSWEERDFIINYKG RIPGKSENIRASTFFIKDEEGEIIAMLCMNVDLTSLSLAHKIIGNLMFIEEDNKNDEEVLRNTSITDMLHELITDVLKNY PRAPSLLIMDEKKEIVKKLNEKGVFLLKGAVAEVAMRLETSEQTIYRYLK
Sequences:
>Translated_210_residues MTQDEIIKSWIPMVEFIARTYGENCEVILHDLRDLDKSIVAIKNNHITGRQIGGTITDFALKLIHEKSWEERDFIINYKG RIPGKSENIRASTFFIKDEEGEIIAMLCMNVDLTSLSLAHKIIGNLMFIEEDNKNDEEVLRNTSITDMLHELITDVLKNY PRAPSLLIMDEKKEIVKKLNEKGVFLLKGAVAEVAMRLETSEQTIYRYLK >Mature_209_residues TQDEIIKSWIPMVEFIARTYGENCEVILHDLRDLDKSIVAIKNNHITGRQIGGTITDFALKLIHEKSWEERDFIINYKGR IPGKSENIRASTFFIKDEEGEIIAMLCMNVDLTSLSLAHKIIGNLMFIEEDNKNDEEVLRNTSITDMLHELITDVLKNYP RAPSLLIMDEKKEIVKKLNEKGVFLLKGAVAEVAMRLETSEQTIYRYLK
Specific function: Unknown
COG id: COG2964
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yheO [H]
Homologues:
Organism=Escherichia coli, GI87082246, Length=207, Percent_Identity=29.951690821256, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013559 - ProDom: PD037769 [H]
Pfam domain/function: PF08348 PAS_6 [H]
EC number: NA
Molecular weight: Translated: 24201; Mature: 24070
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDEIIKSWIPMVEFIARTYGENCEVILHDLRDLDKSIVAIKNNHITGRQIGGTITDFA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCHHCCCHHHHHH LKLIHEKSWEERDFIINYKGRIPGKSENIRASTFFIKDEEGEIIAMLCMNVDLTSLSLAH HHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHH KIIGNLMFIEEDNKNDEEVLRNTSITDMLHELITDVLKNYPRAPSLLIMDEKKEIVKKLN HHHCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHC EKGVFLLKGAVAEVAMRLETSEQTIYRYLK CCCEEEEHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure TQDEIIKSWIPMVEFIARTYGENCEVILHDLRDLDKSIVAIKNNHITGRQIGGTITDFA CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCHHCCCHHHHHH LKLIHEKSWEERDFIINYKGRIPGKSENIRASTFFIKDEEGEIIAMLCMNVDLTSLSLAH HHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHH KIIGNLMFIEEDNKNDEEVLRNTSITDMLHELITDVLKNYPRAPSLLIMDEKKEIVKKLN HHHCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHC EKGVFLLKGAVAEVAMRLETSEQTIYRYLK CCCEEEEHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]