| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022816
Identifier: 170022816
GI number: 170022816
Start: 622245
End: 623744
Strand: Reverse
Name: 170022816
Synonym: YPK_0565
Alternate gene names: NA
Gene position: 623744-622245 (Counterclockwise)
Preceding gene: 170022817
Following gene: 170022815
Centisome position: 13.3
GC content: 49.2
Gene sequence:
>1500_bases ATGGCGAATATTGTTACCTGTACGACAAAAGATGGCGAAACCATCCAGTACGTTGACGAGATCATCGGCTCGGGCTCAAT GAAGGATGTGTACTTCTCTCCCGATAAATCTTATGTCGTGGCCTTTTATAAAAAACCACAGAATGATCAGGCGAAAGAGC GCATCGATATGATCACCGGTCGCTACCGGCAGAATATTTTCGAGCAGTCCGGTGGGGAGTACTGGAAAGATTTATTTTGC TGGCCCACCCATGTCGTTGAGCATAATGGAAAAATTGGGATTGTGGTGCCCACCTACCAAAATCATTTTTTCTTTAAGTA CGGTTCTAAAAACAATGATTTTCTTGGCATAAAAGGCCGAGAGAAAGAAGGTAAATGGTTCGCCAGCGCCAATAATCAGA ATAAATTTCTGGATCCACGCGAGCGCGGCAATATTCTGAACTACCTCAAGGTGTGCCTACTGCTGACGAGAGCCGTCAGG CGGATGCATGCAGCGGGTCTATGCCATAGCGATCTGAGTTACAAAAACGTTCTCATCGATCCAGAGCAGGGGCATGCCTG TATCATTGATGTTGACGGGCTGGTGGTACCGGGCAAATTCCCTCCTGACGTGGTAGGAACGCCCGATTTTATTGCACCAG AGGTGGTGAAAACCAGCCATCTGCTGAAAGAAGATCCCCAACGGATTTTACCGAACATAACAACTGACCGACATGCGCTC TCGGTGCTTATCTACATGTACCTGTTTTACCGTCACCCGCTTCGGGGCGGAAAAATACATGACATGGATGATGAAGTCCG TGACGAGTCACTGGCTATGGGGGAAAGAGCGCTTTTTATCGAGCATCCAACCGACCGCAGTAATGCCGTTAAACTCAATC AAGTGAAGCCGTCCTCTCTTCCTTGGGCGGATCCGCAGAAAGTCCCCTACACCATTATGGGCCCCTATCTGACACAGTTG TTTGAGAAAGCATTCATCGATGGCCTGCATGACCCATCCAAACGCCCGACTGCTGATGAATGGGAAACCGCCTTGGTTAA AACGGTTGACCTCATCCAGCCGTGTCAAAACACCGCTTGTGAACAGAAGTGGTACGTCTTCTCAGGGAAAACCAAGCCGG TTTGCCCGTATTGCGGAACCGCTTTTAAGGGAAAACTGCCCATTCTGAATTTGTACTCATCACGAAAAGCAGGCAGTTAC CGGCCCGATGATCATCGCCTGATGGTCTGGAATGGTCAGTCGCTTTATGCGTGGCACGTTAACCGGCTCATTGCGCCGAA CGAACGCACATCCGAAGCGCAAAAAAAACGGGTAGGCTATTTTGTTTTCCATAACGATCAATGGTGGCTGGTCAATGAAG GGATTACTGGGTTGATGTCACTACCCGATAAAAAAGCCATCGGCATTGGGGAGAAATTGGCGCTCACTGATGGTGCGCAG TTAGTCCTCTCCACAGAAGAGGGTGGGCGGTTGGTGGTGGTTCAGCTTGTCGCTAATTGA
Upstream 100 bases:
>100_bases TTGGCGGAATGGCTAAACTTTTTCTCTCCAGGCAATCATGACGATCGGACAATGGTCGTTTCGTGGTGATCGGACTGAAT TTTATTGCTGGTGAGTAATT
Downstream 100 bases:
>100_bases CCGTTCAGCTCGTTTCTAATCAAAAACTAAATATCGGCTTATTCAATGGCCTGGGTAGGCACCAGGTCATTGAATGACAC AACGATTACCGTGAAGCGAA
Product: putative kinase protein
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; Kinase Protein; Serine/Threonine Kinase-Like Protein; Protein Kinase Subdomain-Containing Protein; Kinase; Protein Kinase Family Protein
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQAKERIDMITGRYRQNIFEQSGGEYWKDLFC WPTHVVEHNGKIGIVVPTYQNHFFFKYGSKNNDFLGIKGREKEGKWFASANNQNKFLDPRERGNILNYLKVCLLLTRAVR RMHAAGLCHSDLSYKNVLIDPEQGHACIIDVDGLVVPGKFPPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHAL SVLIYMYLFYRHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSLPWADPQKVPYTIMGPYLTQL FEKAFIDGLHDPSKRPTADEWETALVKTVDLIQPCQNTACEQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSY RPDDHRLMVWNGQSLYAWHVNRLIAPNERTSEAQKKRVGYFVFHNDQWWLVNEGITGLMSLPDKKAIGIGEKLALTDGAQ LVLSTEEGGRLVVVQLVAN
Sequences:
>Translated_499_residues MANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQAKERIDMITGRYRQNIFEQSGGEYWKDLFC WPTHVVEHNGKIGIVVPTYQNHFFFKYGSKNNDFLGIKGREKEGKWFASANNQNKFLDPRERGNILNYLKVCLLLTRAVR RMHAAGLCHSDLSYKNVLIDPEQGHACIIDVDGLVVPGKFPPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHAL SVLIYMYLFYRHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSLPWADPQKVPYTIMGPYLTQL FEKAFIDGLHDPSKRPTADEWETALVKTVDLIQPCQNTACEQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSY RPDDHRLMVWNGQSLYAWHVNRLIAPNERTSEAQKKRVGYFVFHNDQWWLVNEGITGLMSLPDKKAIGIGEKLALTDGAQ LVLSTEEGGRLVVVQLVAN >Mature_498_residues ANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQAKERIDMITGRYRQNIFEQSGGEYWKDLFCW PTHVVEHNGKIGIVVPTYQNHFFFKYGSKNNDFLGIKGREKEGKWFASANNQNKFLDPRERGNILNYLKVCLLLTRAVRR MHAAGLCHSDLSYKNVLIDPEQGHACIIDVDGLVVPGKFPPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHALS VLIYMYLFYRHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSLPWADPQKVPYTIMGPYLTQLF EKAFIDGLHDPSKRPTADEWETALVKTVDLIQPCQNTACEQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSYR PDDHRLMVWNGQSLYAWHVNRLIAPNERTSEAQKKRVGYFVFHNDQWWLVNEGITGLMSLPDKKAIGIGEKLALTDGAQL VLSTEEGGRLVVVQLVAN
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56659; Mature: 56528
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQAKERIDMITG CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHH RYRQNIFEQSGGEYWKDLFCWPTHVVEHNGKIGIVVPTYQNHFFFKYGSKNNDFLGIKGR HHHHHHHHHCCCHHHHHHHHCCHHHEECCCEEEEEEECCCCEEEEEECCCCCCEEEECCC EKEGKWFASANNQNKFLDPRERGNILNYLKVCLLLTRAVRRMHAAGLCHSDLSYKNVLID CCCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE PEQGHACIIDVDGLVVPGKFPPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHAL CCCCCEEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHH SVLIYMYLFYRHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSL HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCC PWADPQKVPYTIMGPYLTQLFEKAFIDGLHDPSKRPTADEWETALVKTVDLIQPCQNTAC CCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSYRPDDHRLMVWNGQSLYAWHV CCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEE NRLIAPNERTSEAQKKRVGYFVFHNDQWWLVNEGITGLMSLPDKKAIGIGEKLALTDGAQ CEEECCCCCHHHHHHHCCCEEEEECCEEEEEECCCCCHHCCCCCCCCCCCCEEEECCCCE LVLSTEEGGRLVVVQLVAN EEEEECCCCEEEEEEEECC >Mature Secondary Structure ANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQAKERIDMITG CCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHH RYRQNIFEQSGGEYWKDLFCWPTHVVEHNGKIGIVVPTYQNHFFFKYGSKNNDFLGIKGR HHHHHHHHHCCCHHHHHHHHCCHHHEECCCEEEEEEECCCCEEEEEECCCCCCEEEECCC EKEGKWFASANNQNKFLDPRERGNILNYLKVCLLLTRAVRRMHAAGLCHSDLSYKNVLID CCCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE PEQGHACIIDVDGLVVPGKFPPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHAL CCCCCEEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHH SVLIYMYLFYRHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSL HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCC PWADPQKVPYTIMGPYLTQLFEKAFIDGLHDPSKRPTADEWETALVKTVDLIQPCQNTAC CCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSYRPDDHRLMVWNGQSLYAWHV CCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEE NRLIAPNERTSEAQKKRVGYFVFHNDQWWLVNEGITGLMSLPDKKAIGIGEKLALTDGAQ CEEECCCCCHHHHHHHCCCEEEEECCEEEEEECCCCCHHCCCCCCCCCCCCEEEECCCCE LVLSTEEGGRLVVVQLVAN EEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA