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The map label for this gene is yraM [H]

Identifier: 170022790

GI number: 170022790

Start: 590951

End: 592924

Strand: Reverse

Name: yraM [H]

Synonym: YPK_0539

Alternate gene names: 170022790

Gene position: 592924-590951 (Counterclockwise)

Preceding gene: 170022792

Following gene: 170022789

Centisome position: 12.64

GC content: 50.96

Gene sequence:

>1974_bases
ATGCTTTCCTCAACATTCGTTCGTTCTAAAGCAGGGCTTGTTCCTGTCATTCTGGCTGCTCTTATTTTAGCGGCCTGTAC
AGGCGATGCGCCACAAACGCCGCCCCCCGTAAATATACAGGACGAAGCAAGCGCTAACTCTGATTATTATCTGCAACAGT
TGCAGCAGAGCAGTGATGATAACAAGGCTGACTGGCAATTACTTGCCATTCGTGCCCTATTACGTGAGGCAAAAGTGCCT
CAGGCCGCCGAACAACTCAGCACTCTCCCTGCAAACCTGAGCGATACACAGCGCCAGGAACAGCAATTGCTGGCAGCTGA
ACTGTTGATCGCGCAGAAAAATACGCCAGCGGCGGCTGATATTCTTGCCAAATTAGAGGCAACTCAACTCTCAGCTAACC
AAAAAGTACGCTACTATCAGGCCCAAATTGCCGCCAATCAGGATAAAGCCACCCTGCCATTGATTCGTGCATTTATCGCT
CAGGAACCATTACTGACAGATAAAGCCCATCAAGATAATATTGATGGCACTTGGCAGTCACTGTCCCAACTGACACCACA
AGAATTAAATACCATGGTGATCAACGCAGACGAAAATGTGCTGCAAGGCTGGCTGGATTTACTGCGTGTTTATCAAGATA
ACAAGCAAGACCCAGAGCTACTGAAAGCCGGGATTAAAGACTGGCAAACCCGTTACCCACAAAACCCGGCAGCGAAAAAT
CTGCCAACTGCATTAACTCAGATCAGTAATTTCAGCCAGGCATCCACCGCCAAGATTGCTCTGCTGCTGCCATTAAGTGG
CCCGGCACAAGTATTCGCCGATGCCATCCAGCAAGGTTTTACTGCCGCCCAAAATGGCTCAGCGGTAACGGCTTCAGTAC
CAGTAACGCCAAATGTGACGGAAAGCAGCCCAACGGATACTGCTGCGGTTGTTTCGGATGATACCCCGGCCACCCTTCCG
GCCCCAGTGACCCCCCCCGTCGTCACCAACGCCCAAGTGAAAATCTACGATACCAACACTCAACCACTGGCAGCGCTATT
GGCTCAAGCCCAGCAAGATGGTGCAACACTGGTCGTTGGCCCTCTGCTAAAACCCGAAGTTGAGCAACTCAGTGCCACCC
CAAGCACATTGAATATTCTGGCGTTGAACCAACCAGAAGCCAGTAATAACAGCCCAAACATCTGTTACTTTGCCCTATCG
CCAGAAGATGAAGCCCGTGATGCAGCGCATCACCTGTGGGAACAGCAAAAAAGAATGCCGCTGTTGCTGGTGCCTCGTGG
TGCCCTTGGTGAACGTATTGCCAAAGCCTTCGCTGACGAGTGGCAAAAACAAGGTGGGCAAACGGTATTACAACAGAACT
TCGGTTCAACCACTGAGTTGAAGCAATCCATCAACAGTGGTGCCGGTATCCGCCTGACCGGTACCCCCGTTAGCGTTTCT
AATGTAGCCGCCGCCCCGGCCTCCGTCACTATTGCGGGCCTGACCATTCCAGCACCGCCAATCGATGCACCGGTAGTGTC
AACGTCTTCGAGCGGTAACATTGATGCGGTCTATATCATTGCGACGCCATCTGAATTAACCCTGATTAAGCCAATGATTG
ATATGGCAACCAGTTCACGCAGTAAACCTGCGCTGTTTGCCAGTTCACGTAGCTACCAGGCTGGCGCTGGCCCAGATTAC
CGTCTGGAAATGGAAGGTATACAGTTTAGTGATATTCCGCTGATGGCCGGCTCTAACCCCGCTTTGCTGCAACAAGCATC
GGCTAAATACGCTAACGATTATTCTCTGGTACGCTTATACGCCATGGGGATTGATGCCTGGGCATTGGCAAATCATTTTT
CTGAAATGCGCCAAATCCCTGGCTTCCAAGTCAAAGGGGTCACCGGTGATTTAACTGCATCATCAGATTGTGTTATCACC
CGCAAGCTACCTTGGTTACAATATCGCCAGGGAATGGTGGTGCCACTCGCATAA

Upstream 100 bases:

>100_bases
GTAGATGCAGAAATTACTGCTCGATCGTGTTGATTCATTGTTTCATCCGAATTGCCGATTTAATATTGAGCATCTTGAAA
AAAACATCACTGGATACAGT

Downstream 100 bases:

>100_bases
TTCAGTCACATTCTTCTCATATGTTGTAGAGAATGATGTCATAGAGAATGATGTGGTAGAAAATATTGTCGAGTGATTAA
GGATTTTAGGGACTATCGAT

Product: LppC family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSDYYLQQLQQSSDDNKADWQLLAIRALLREAKVP
QAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEATQLSANQKVRYYQAQIAANQDKATLPLIRAFIA
QEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLLRVYQDNKQDPELLKAGIKDWQTRYPQNPAAKN
LPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSAVTASVPVTPNVTESSPTDTAAVVSDDTPATLP
APVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVEQLSATPSTLNILALNQPEASNNSPNICYFALS
PEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQTVLQQNFGSTTELKQSINSGAGIRLTGTPVSVS
NVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTLIKPMIDMATSSRSKPALFASSRSYQAGAGPDY
RLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWALANHFSEMRQIPGFQVKGVTGDLTASSDCVIT
RKLPWLQYRQGMVVPLA

Sequences:

>Translated_657_residues
MLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSDYYLQQLQQSSDDNKADWQLLAIRALLREAKVP
QAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEATQLSANQKVRYYQAQIAANQDKATLPLIRAFIA
QEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLLRVYQDNKQDPELLKAGIKDWQTRYPQNPAAKN
LPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSAVTASVPVTPNVTESSPTDTAAVVSDDTPATLP
APVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVEQLSATPSTLNILALNQPEASNNSPNICYFALS
PEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQTVLQQNFGSTTELKQSINSGAGIRLTGTPVSVS
NVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTLIKPMIDMATSSRSKPALFASSRSYQAGAGPDY
RLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWALANHFSEMRQIPGFQVKGVTGDLTASSDCVIT
RKLPWLQYRQGMVVPLA
>Mature_657_residues
MLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSDYYLQQLQQSSDDNKADWQLLAIRALLREAKVP
QAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEATQLSANQKVRYYQAQIAANQDKATLPLIRAFIA
QEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLLRVYQDNKQDPELLKAGIKDWQTRYPQNPAAKN
LPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSAVTASVPVTPNVTESSPTDTAAVVSDDTPATLP
APVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVEQLSATPSTLNILALNQPEASNNSPNICYFALS
PEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQTVLQQNFGSTTELKQSINSGAGIRLTGTPVSVS
NVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTLIKPMIDMATSSRSKPALFASSRSYQAGAGPDY
RLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWALANHFSEMRQIPGFQVKGVTGDLTASSDCVIT
RKLPWLQYRQGMVVPLA

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=683, Percent_Identity=53.0014641288433, Blast_Score=698, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 70216; Mature: 70216

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSDYYLQQLQQSSDD
CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
NKADWQLLAIRALLREAKVPQAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAAD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
ILAKLEATQLSANQKVRYYQAQIAANQDKATLPLIRAFIAQEPLLTDKAHQDNIDGTWQS
HHHHHHHHHHCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
LSQLTPQELNTMVINADENVLQGWLDLLRVYQDNKQDPELLKAGIKDWQTRYPQNPAAKN
HHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSAVTASVPVTPNVT
CHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
ESSPTDTAAVVSDDTPATLPAPVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEC
PLLKPEVEQLSATPSTLNILALNQPEASNNSPNICYFALSPEDEARDAAHHLWEQQKRMP
CCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
LLLVPRGALGERIAKAFADEWQKQGGQTVLQQNFGSTTELKQSINSGAGIRLTGTPVSVS
EEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCHH
NVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTLIKPMIDMATSSR
HHCCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
SKPALFASSRSYQAGAGPDYRLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLY
CCCEEEECCCCCCCCCCCCEEEEECCCEECCCEEECCCCHHHHHHHHHHHCCCHHEEEHE
AMGIDAWALANHFSEMRQIPGFQVKGVTGDLTASSDCVITRKLPWLQYRQGMVVPLA
ECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCHHHHHCCEEEECC
>Mature Secondary Structure
MLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSDYYLQQLQQSSDD
CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
NKADWQLLAIRALLREAKVPQAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAAD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
ILAKLEATQLSANQKVRYYQAQIAANQDKATLPLIRAFIAQEPLLTDKAHQDNIDGTWQS
HHHHHHHHHHCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
LSQLTPQELNTMVINADENVLQGWLDLLRVYQDNKQDPELLKAGIKDWQTRYPQNPAAKN
HHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSAVTASVPVTPNVT
CHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
ESSPTDTAAVVSDDTPATLPAPVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEC
PLLKPEVEQLSATPSTLNILALNQPEASNNSPNICYFALSPEDEARDAAHHLWEQQKRMP
CCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
LLLVPRGALGERIAKAFADEWQKQGGQTVLQQNFGSTTELKQSINSGAGIRLTGTPVSVS
EEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCHH
NVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTLIKPMIDMATSSR
HHCCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
SKPALFASSRSYQAGAGPDYRLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLY
CCCEEEECCCCCCCCCCCCEEEEECCCEECCCEEECCCCHHHHHHHHHHHCCCHHEEEHE
AMGIDAWALANHFSEMRQIPGFQVKGVTGDLTASSDCVITRKLPWLQYRQGMVVPLA
ECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]