| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170022779
Identifier: 170022779
GI number: 170022779
Start: 575892
End: 576377
Strand: Reverse
Name: 170022779
Synonym: YPK_0528
Alternate gene names: NA
Gene position: 576377-575892 (Counterclockwise)
Preceding gene: 170022780
Following gene: 170022772
Centisome position: 12.29
GC content: 47.33
Gene sequence:
>486_bases ATGAAATTTCACTTACCTTTTATTGTTGGCGGATTACTGGCGATGAGTAGCAGCGCATTCGCAATGTCTCTAAATTATCA AGAAGTTGGCTACAATATTGAGGCGCGGGGCGCACGTGCAGTGGTTGCCGAACTGGAGAAATCGGGGCAACTGCCAGCGG TTGAGAATAATATTAAGCTTGGTGATGATAACTGGATTGCTATGGCACCCAAATTAGCCAGTGCCGGTAATGCGAAGTTT ACTGAAGGGGTGAAATCTGCCCTCTCCTCTGCCCTGATTTATAACCCGGCAGCGGTATTAAAAGCAGTCAGTGGCAGTAA AATATTAACATTATCCGATGTTTGCACTGCACCGATAGATGTCAAAGACAGTGAGGCAAAAGCCAACTTCCAGCAGCGAG CGTCACGGACATTATTGACCATCAAGAACAGTGACATGGCAGGCCCACGTGATAGCTGCCTGGCTGAGCTCAAAAAACTG TCGTAG
Upstream 100 bases:
>100_bases ATCCACGATAGCGCTATAGTGAAGGCTTGGTTGTTAAGTGCAAGCCCCTCACAACTGGCATATACTGTCACACTTTGCTT TAAATAAAGGATAATCTGTT
Downstream 100 bases:
>100_bases CAATTATCAAGTAAATGAAAAACAGCCATCAAGTAAACGAAAAAACGCTACCAACAGCCAGCTAATCAAGATTCCCGCAC AAAACAGAAACGATAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKLGDDNWIAMAPKLASAGNAKF TEGVKSALSSALIYNPAAVLKAVSGSKILTLSDVCTAPIDVKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKL S
Sequences:
>Translated_161_residues MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKLGDDNWIAMAPKLASAGNAKF TEGVKSALSSALIYNPAAVLKAVSGSKILTLSDVCTAPIDVKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKL S >Mature_161_residues MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKLGDDNWIAMAPKLASAGNAKF TEGVKSALSSALIYNPAAVLKAVSGSKILTLSDVCTAPIDVKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKL S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17033; Mature: 17033
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKL CEEECHHHHHHHHHHCCCCEEEEECHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCEEE GDDNWIAMAPKLASAGNAKFTEGVKSALSSALIYNPAAVLKAVSGSKILTLSDVCTAPID CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEHHHCCCCCC VKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKLS CCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKL CEEECHHHHHHHHHHCCCCEEEEECHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCEEE GDDNWIAMAPKLASAGNAKFTEGVKSALSSALIYNPAAVLKAVSGSKILTLSDVCTAPID CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEHHHCCCCCC VKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKLS CCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA