| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022471
Identifier: 170022471
GI number: 170022471
Start: 250001
End: 250699
Strand: Reverse
Name: 170022471
Synonym: YPK_0210
Alternate gene names: NA
Gene position: 250699-250001 (Counterclockwise)
Preceding gene: 170022472
Following gene: 170022470
Centisome position: 5.35
GC content: 45.78
Gene sequence:
>699_bases ATGAATAAAGAAAAGTATCTCGCTAAAATAAAGAAGCTACTGAATTTGGCAAAGCGTAGTGCCAATCCTAACGAAGCTGC CAATGCTTTGCGGCAGGCTCAAAATCTAATGCGTGAACATCGGTTAAATGAAACCGATGTTGCGTTGACCGAGATTAGTG AAGCTAGCAGTAAAGGTGCTCCATCCGATGCTGTATCTATTCCGCGTTATATGTCGTCATTAATGTCCATTATTAGTCGG GCATTTGGTGTTCAGAATTATTTAACCTGGCAAGGTAATAAACGAACCATCGTTTTTTATGGCCCAAACGAACGGCCACA GATTGCCGCTTATGCCTTTGATGTCTTATCTCGTCAGATGATGACTTCTCGCCGTGCGTTCAGTGCAAAACAGCGTAACA GTCTCAAGCGGACAACCAAAATAGGCCGCGCAGATAGCTATTGTGAAGCCTGGGTTAGCGGGGCTTACACCGTCATTGAG CGTTTTGTGGTTACAACCAATGAGCGGGAACTGATGGATACCTATTACCAACGAATCAGTAATGGAGGGGCTTGGAAAGC AGTAGCTATGCGTGAGGCTAAAAAAGTACGAGGAATAAACGATGCCGCTGACGCTGGATATCGCGCGGGGAAAGACGCCA ATTTGCTCCATGCAGTCAATGGTACTGATTCTCAGCCTGCACTGATTGGGAGGTCATAA
Upstream 100 bases:
>100_bases TTAACGCCTGCGGGCTAATTTAATTCGTTTTTAAATCATCTTTAAAATGGCGTAAACCCGCAGGGGCGCGCTTACGCCAA AATAATGGAAAACCATCATC
Downstream 100 bases:
>100_bases TGGAAAGTTTGTCTAAAACTGATTCTTTACGCCAGGCGCTGGAAATTCTGGGTACCGCCACTGGCCGTGAACTAGCTAAT TTTACTGGATTACCTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MNKEKYLAKIKKLLNLAKRSANPNEAANALRQAQNLMREHRLNETDVALTEISEASSKGAPSDAVSIPRYMSSLMSIISR AFGVQNYLTWQGNKRTIVFYGPNERPQIAAYAFDVLSRQMMTSRRAFSAKQRNSLKRTTKIGRADSYCEAWVSGAYTVIE RFVVTTNERELMDTYYQRISNGGAWKAVAMREAKKVRGINDAADAGYRAGKDANLLHAVNGTDSQPALIGRS
Sequences:
>Translated_232_residues MNKEKYLAKIKKLLNLAKRSANPNEAANALRQAQNLMREHRLNETDVALTEISEASSKGAPSDAVSIPRYMSSLMSIISR AFGVQNYLTWQGNKRTIVFYGPNERPQIAAYAFDVLSRQMMTSRRAFSAKQRNSLKRTTKIGRADSYCEAWVSGAYTVIE RFVVTTNERELMDTYYQRISNGGAWKAVAMREAKKVRGINDAADAGYRAGKDANLLHAVNGTDSQPALIGRS >Mature_232_residues MNKEKYLAKIKKLLNLAKRSANPNEAANALRQAQNLMREHRLNETDVALTEISEASSKGAPSDAVSIPRYMSSLMSIISR AFGVQNYLTWQGNKRTIVFYGPNERPQIAAYAFDVLSRQMMTSRRAFSAKQRNSLKRTTKIGRADSYCEAWVSGAYTVIE RFVVTTNERELMDTYYQRISNGGAWKAVAMREAKKVRGINDAADAGYRAGKDANLLHAVNGTDSQPALIGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25892; Mature: 25892
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEKYLAKIKKLLNLAKRSANPNEAANALRQAQNLMREHRLNETDVALTEISEASSKGA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC PSDAVSIPRYMSSLMSIISRAFGVQNYLTWQGNKRTIVFYGPNERPQIAAYAFDVLSRQM CHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHH MTSRRAFSAKQRNSLKRTTKIGRADSYCEAWVSGAYTVIERFVVTTNERELMDTYYQRIS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NGGAWKAVAMREAKKVRGINDAADAGYRAGKDANLLHAVNGTDSQPALIGRS CCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNKEKYLAKIKKLLNLAKRSANPNEAANALRQAQNLMREHRLNETDVALTEISEASSKGA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC PSDAVSIPRYMSSLMSIISRAFGVQNYLTWQGNKRTIVFYGPNERPQIAAYAFDVLSRQM CHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHH MTSRRAFSAKQRNSLKRTTKIGRADSYCEAWVSGAYTVIERFVVTTNERELMDTYYQRIS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NGGAWKAVAMREAKKVRGINDAADAGYRAGKDANLLHAVNGTDSQPALIGRS CCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA