| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022470
Identifier: 170022470
GI number: 170022470
Start: 249501
End: 250001
Strand: Reverse
Name: 170022470
Synonym: YPK_0209
Alternate gene names: NA
Gene position: 250001-249501 (Counterclockwise)
Preceding gene: 170022471
Following gene: 170022469
Centisome position: 5.33
GC content: 48.1
Gene sequence:
>501_bases ATGGAAAGTTTGTCTAAAACTGATTCTTTACGCCAGGCGCTGGAAATTCTGGGTACCGCCACTGGCCGTGAACTAGCTAA TTTTACTGGATTACCTATTGACCGAGTTGGTTCATTGTTAGCTAGTGATATCAGCAAAGGCCGTATTGTTCGGGGCTGGA ATGGTAAAACTCGTTGTTATGGTATGGCTGGGACTCTCACTGACACCGGTTCATTAGCAGGTAAGTCAGGCCCACGTTAC TGGAAAAACAAATCAATACGAACCACAAAAGCAAACAGTAGCAAGCTACGCTGCCTGCCTTTAGGGGTAACCAATCCCGA ATTCCAGACATTAACGCTAAAAGCCGTTGCCCTTGAAAAACAATCTAAATATGCGAGTGCGGGGCCAGTGTGGTTAGCCG CTGCCGACATATCAATGTTGATCGTCAACGAGCAGTGGTGCCTTACGCGGGCTAAGTTCTGTGACTCTGCTCAGGCTAAG CGCTGGGGAGGTCAACCATGA
Upstream 100 bases:
>100_bases ACGATGCCGCTGACGCTGGATATCGCGCGGGGAAAGACGCCAATTTGCTCCATGCAGTCAATGGTACTGATTCTCAGCCT GCACTGATTGGGAGGTCATA
Downstream 100 bases:
>100_bases AAGCCCATGTCAGTAGCCGGGAGTATCAGGATAACGGCAATAAACGCATCTATACCCTGATGGATGGCAGCGTGGTGATC GAGTATCCCAATCTGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MESLSKTDSLRQALEILGTATGRELANFTGLPIDRVGSLLASDISKGRIVRGWNGKTRCYGMAGTLTDTGSLAGKSGPRY WKNKSIRTTKANSSKLRCLPLGVTNPEFQTLTLKAVALEKQSKYASAGPVWLAAADISMLIVNEQWCLTRAKFCDSAQAK RWGGQP
Sequences:
>Translated_166_residues MESLSKTDSLRQALEILGTATGRELANFTGLPIDRVGSLLASDISKGRIVRGWNGKTRCYGMAGTLTDTGSLAGKSGPRY WKNKSIRTTKANSSKLRCLPLGVTNPEFQTLTLKAVALEKQSKYASAGPVWLAAADISMLIVNEQWCLTRAKFCDSAQAK RWGGQP >Mature_166_residues MESLSKTDSLRQALEILGTATGRELANFTGLPIDRVGSLLASDISKGRIVRGWNGKTRCYGMAGTLTDTGSLAGKSGPRY WKNKSIRTTKANSSKLRCLPLGVTNPEFQTLTLKAVALEKQSKYASAGPVWLAAADISMLIVNEQWCLTRAKFCDSAQAK RWGGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17952; Mature: 17952
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLSKTDSLRQALEILGTATGRELANFTGLPIDRVGSLLASDISKGRIVRGWNGKTRCY CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEE GMAGTLTDTGSLAGKSGPRYWKNKSIRTTKANSSKLRCLPLGVTNPEFQTLTLKAVALEK EECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCEEEEEEEEEHHH QSKYASAGPVWLAAADISMLIVNEQWCLTRAKFCDSAQAKRWGGQP HCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure MESLSKTDSLRQALEILGTATGRELANFTGLPIDRVGSLLASDISKGRIVRGWNGKTRCY CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEE GMAGTLTDTGSLAGKSGPRYWKNKSIRTTKANSSKLRCLPLGVTNPEFQTLTLKAVALEK EECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCEEEEEEEEEHHH QSKYASAGPVWLAAADISMLIVNEQWCLTRAKFCDSAQAKRWGGQP HCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA