| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022465
Identifier: 170022465
GI number: 170022465
Start: 247918
End: 248310
Strand: Reverse
Name: 170022465
Synonym: YPK_0204
Alternate gene names: NA
Gene position: 248310-247918 (Counterclockwise)
Preceding gene: 170022466
Following gene: 170022464
Centisome position: 5.3
GC content: 49.11
Gene sequence:
>393_bases ATGACTAAGCACAATAGTAAAGAACATGCGGCGGCGCGTAAGCGCCTCTCCCGAGCTCGCGGAAAGTCGCAGTTTGGTCA GCATCGTCTTGAGATAGTTCTCTCTGACCGTGGATTCAAAAAGTTGCTTGATGCCTGTCAACGCCGCAATCCGGGTCGCA AGCCCTATATTCACAGTGAGTACATTGAGCTTTTACTCTTCTGTGATGGTGAGCGACTGGAGCGGCAAGAGGCGTGTTTA GGCCATTGTAATCACTGCAAGCTGCCATTACCCGCAGGTTGCAATACGGCTTTTATAGGCGAATCAGCATGTTGGTTTTA TCGTCAGTCACGTTCGTTAAATCTGACAGATGTGACTGGCCACGCTCAGTTGGATGAGGTACAAAATGACTAA
Upstream 100 bases:
>100_bases AAAGACATTCACTGGATTGCCTTCATCTTCACAATGTTGCTTTGGCCTGCGGGACTGATGATTTTTGAAGCGCGGCTGAT TGAAGAGGACTATGACGACA
Downstream 100 bases:
>100_bases TTTGGGATTGTTAAAGGATCATCTGGCGTTGGGTGAAGACTACAGCGAGCAACTGTTGCAAGTGCTCCAGTCTGCGCTTG ATGAAATTACCGCTTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTKHNSKEHAAARKRLSRARGKSQFGQHRLEIVLSDRGFKKLLDACQRRNPGRKPYIHSEYIELLLFCDGERLERQEACL GHCNHCKLPLPAGCNTAFIGESACWFYRQSRSLNLTDVTGHAQLDEVQND
Sequences:
>Translated_130_residues MTKHNSKEHAAARKRLSRARGKSQFGQHRLEIVLSDRGFKKLLDACQRRNPGRKPYIHSEYIELLLFCDGERLERQEACL GHCNHCKLPLPAGCNTAFIGESACWFYRQSRSLNLTDVTGHAQLDEVQND >Mature_129_residues TKHNSKEHAAARKRLSRARGKSQFGQHRLEIVLSDRGFKKLLDACQRRNPGRKPYIHSEYIELLLFCDGERLERQEACLG HCNHCKLPLPAGCNTAFIGESACWFYRQSRSLNLTDVTGHAQLDEVQND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14894; Mature: 14763
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHNSKEHAAARKRLSRARGKSQFGQHRLEIVLSDRGFKKLLDACQRRNPGRKPYIHSE CCCCCCHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHH YIELLLFCDGERLERQEACLGHCNHCKLPLPAGCNTAFIGESACWFYRQSRSLNLTDVTG HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHEEECCCCCCCEEECCC HAQLDEVQND CCHHHHCCCC >Mature Secondary Structure TKHNSKEHAAARKRLSRARGKSQFGQHRLEIVLSDRGFKKLLDACQRRNPGRKPYIHSE CCCCCHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHH YIELLLFCDGERLERQEACLGHCNHCKLPLPAGCNTAFIGESACWFYRQSRSLNLTDVTG HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHEEECCCCCCCEEECCC HAQLDEVQND CCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA