| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022462
Identifier: 170022462
GI number: 170022462
Start: 246632
End: 247069
Strand: Reverse
Name: 170022462
Synonym: YPK_0201
Alternate gene names: NA
Gene position: 247069-246632 (Counterclockwise)
Preceding gene: 170022463
Following gene: 170022461
Centisome position: 5.27
GC content: 49.32
Gene sequence:
>438_bases ATGATGGATATTGAGCAGGTTAAAGCGCTATTGCCGGAGTCTGTCCAGCAGATTGCCGAGTTGATCGGTTATCCCGCCAC AGCCCGCCTGCTCGATAAGTTGGGCGGTACTACCTTCCCAATTGGTAAAGGGTTGCGCGCACTTGGCGCAGCCCGTGCCA CGTTGTTACGTGAAACCATTGGTGATGAGAACGCACAACTGCTGGTCAAGCATTTTGGTGGAGAAGTTCTTTACCTTCCA CGTTGTGATCGCGCCTTACGTGAGTTACGTAACCGCTCGTTTTTGGCTGAGTTCTCCGAGTTGCGCGCACTTGGCGTCTC TTCACTGATGGTGATGACTCAGTTATGCCCTAAATATGGTTTTTCTGATAGGTTCGCTTGGGGGTTATTGGCGGAGAGAA AAACATCTAATAATGAACTACAAAGTTCTCTTTTCTAG
Upstream 100 bases:
>100_bases AACATATGTTTCAGGTAAGATATGTTGATTGGTTGCCGCTGGATAAGCTGACAAAACTGATGCAGGCATTGATTATTGAT GCAAAACGTCGAGGGAAACC
Downstream 100 bases:
>100_bases GAGTGAAAAAAATGGAATTAATTTTGGGTGTAATCTTTTTTATATCGGGAGTCTACGTTCTTGATGATGCAACAAAAAGG GGGGTATCGAATCAACTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related Protein; Integral Membrane Protein; Mor Transcription Activator Domain Protein
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MMDIEQVKALLPESVQQIAELIGYPATARLLDKLGGTTFPIGKGLRALGAARATLLRETIGDENAQLLVKHFGGEVLYLP RCDRALRELRNRSFLAEFSELRALGVSSLMVMTQLCPKYGFSDRFAWGLLAERKTSNNELQSSLF
Sequences:
>Translated_145_residues MMDIEQVKALLPESVQQIAELIGYPATARLLDKLGGTTFPIGKGLRALGAARATLLRETIGDENAQLLVKHFGGEVLYLP RCDRALRELRNRSFLAEFSELRALGVSSLMVMTQLCPKYGFSDRFAWGLLAERKTSNNELQSSLF >Mature_145_residues MMDIEQVKALLPESVQQIAELIGYPATARLLDKLGGTTFPIGKGLRALGAARATLLRETIGDENAQLLVKHFGGEVLYLP RCDRALRELRNRSFLAEFSELRALGVSSLMVMTQLCPKYGFSDRFAWGLLAERKTSNNELQSSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16103; Mature: 16103
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDIEQVKALLPESVQQIAELIGYPATARLLDKLGGTTFPIGKGLRALGAARATLLRETI CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GDENAQLLVKHFGGEVLYLPRCDRALRELRNRSFLAEFSELRALGVSSLMVMTQLCPKYG CCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSDRFAWGLLAERKTSNNELQSSLF CCCHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MMDIEQVKALLPESVQQIAELIGYPATARLLDKLGGTTFPIGKGLRALGAARATLLRETI CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GDENAQLLVKHFGGEVLYLPRCDRALRELRNRSFLAEFSELRALGVSSLMVMTQLCPKYG CCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSDRFAWGLLAERKTSNNELQSSLF CCCHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA