| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022371
Identifier: 170022371
GI number: 170022371
Start: 131595
End: 132101
Strand: Direct
Name: 170022371
Synonym: YPK_0110
Alternate gene names: NA
Gene position: 131595-132101 (Clockwise)
Preceding gene: 170022370
Following gene: 170022377
Centisome position: 2.81
GC content: 32.35
Gene sequence:
>507_bases ATGAAAAATAGCAAACATAAAATTCTATTAGGGATGTTCGCTGTTGGCGCGCTCTATACCGCATGGGAGATTGCTCGGCC AGTAGAGATTGTTGATGTTCATATCGATAATTTTAGTGAAGGTTATTATTCAAACTATATAATAGTTAAAAATTTCCCTG TCACTGATAAAGGAAAAATTAGCTGGTGGGAAAATAACAAATTTTTATTAAAAGAAAAATATGGTGTTCCTAAAAATTAT ATAGATGGCCGATTTTCGGTAAAAATATTAGATGCAGGTGATGGATATAAATTAAATTTACCCAAAAGAGATGTATTTTT TCCTGATTCTGATACATCTCATTTAATATGCTTTGAGGAGATGAAAGTAGCAAAAAACTGCATAGATAAAAACTGGATAA TGGATATAGAAAAGATTAGAGATGATAGAATATTTTTCTCTATGGGAAACTCATCCTACCAGCAGCCAGTAGAGGGTGGT GAAATAACAAAAGATGCCGAGGATTAG
Upstream 100 bases:
>100_bases GTGGTGAGATAACAAAAGATGCCGAGGATTAGTATTGGATTTTTACAATATGAGTGATTGCAAAAAATAATTTATTCTCT AGCGGAGATCGCGCCTAAAA
Downstream 100 bases:
>100_bases TGAGATAACTTTATTGCTGGATACCTACTTTCTCACGAAAAACTAAAAAGTAGCGACAATATTGTAGGAGCTATATGACC ATCCTCTTTGTGATGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKNSKHKILLGMFAVGALYTAWEIARPVEIVDVHIDNFSEGYYSNYIIVKNFPVTDKGKISWWENNKFLLKEKYGVPKNY IDGRFSVKILDAGDGYKLNLPKRDVFFPDSDTSHLICFEEMKVAKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPVEGG EITKDAED
Sequences:
>Translated_168_residues MKNSKHKILLGMFAVGALYTAWEIARPVEIVDVHIDNFSEGYYSNYIIVKNFPVTDKGKISWWENNKFLLKEKYGVPKNY IDGRFSVKILDAGDGYKLNLPKRDVFFPDSDTSHLICFEEMKVAKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPVEGG EITKDAED >Mature_168_residues MKNSKHKILLGMFAVGALYTAWEIARPVEIVDVHIDNFSEGYYSNYIIVKNFPVTDKGKISWWENNKFLLKEKYGVPKNY IDGRFSVKILDAGDGYKLNLPKRDVFFPDSDTSHLICFEEMKVAKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPVEGG EITKDAED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19462; Mature: 19462
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSKHKILLGMFAVGALYTAWEIARPVEIVDVHIDNFSEGYYSNYIIVKNFPVTDKGKI CCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEE SWWENNKFLLKEKYGVPKNYIDGRFSVKILDAGDGYKLNLPKRDVFFPDSDTSHLICFEE EEEECCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEECCCCCCCEEEEHHH MKVAKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPVEGGEITKDAED HHHHHHHCCCCCEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNSKHKILLGMFAVGALYTAWEIARPVEIVDVHIDNFSEGYYSNYIIVKNFPVTDKGKI CCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEE SWWENNKFLLKEKYGVPKNYIDGRFSVKILDAGDGYKLNLPKRDVFFPDSDTSHLICFEE EEEECCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEECCCCCCCEEEEHHH MKVAKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPVEGGEITKDAED HHHHHHHCCCCCEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA