| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022370
Identifier: 170022370
GI number: 170022370
Start: 131023
End: 131526
Strand: Direct
Name: 170022370
Synonym: YPK_0109
Alternate gene names: NA
Gene position: 131023-131526 (Clockwise)
Preceding gene: 170022369
Following gene: 170022371
Centisome position: 2.79
GC content: 35.32
Gene sequence:
>504_bases ATGCTAAAAAATAATTATAAGATTTTATTAGGAATGATTGCTGTTGGGGTGCTCTATGCTGCATGGGAAATTTCTAGGCC GGTGGAAATTATGGATATTTATATCGATAATTTTAGCGAAGGTTATTACTCAAACCATATAATGGTTAAGAATTTTCCCA TTACTGATAAAGGGAAACTCGCTTGGTGGAAAGATAATAAAACTATGTTAAAAGAAAAATATGGTATTCCTAAACCTTAT CAGGATGGGCGATTTTCAATAAGCATATGGGACTTCAGCGATGGTTATAAAAAAATGCCCACTGGAGATTTACGGCTCAG TACTGACTCGTCTGATTTACTCTGTTTCGATGAGATGAAGACTGAAAAAAACTGCATAGATAAAAACTGGATAATGGATA TAGAAAAGATTAGAGATGATAGAATATTTTTCTCTATGGGAAACTCATCCTACCAGCAGCCACCAGTAGAGGGTGGTGAG ATAACAAAAGATGCCGAGGATTAG
Upstream 100 bases:
>100_bases CATATCTGGTTTGTCCTCCAGCGTTGGAAAGGATTAGGTTATAAACCCTTTCTGACTAATATGGAAGCTACCTTAGAGAT TACTGGAGTACGCCCCAAAA
Downstream 100 bases:
>100_bases TATTGGATTTTTACAATATGAGTGATTGCAAAAAATAATTTATTCTCTAGCGGAGATCGCGCCTAAAAATGAAAAATAGC AAACATAAAATTCTATTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLKNNYKILLGMIAVGVLYAAWEISRPVEIMDIYIDNFSEGYYSNHIMVKNFPITDKGKLAWWKDNKTMLKEKYGIPKPY QDGRFSISIWDFSDGYKKMPTGDLRLSTDSSDLLCFDEMKTEKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPPVEGGE ITKDAED
Sequences:
>Translated_167_residues MLKNNYKILLGMIAVGVLYAAWEISRPVEIMDIYIDNFSEGYYSNHIMVKNFPITDKGKLAWWKDNKTMLKEKYGIPKPY QDGRFSISIWDFSDGYKKMPTGDLRLSTDSSDLLCFDEMKTEKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPPVEGGE ITKDAED >Mature_167_residues MLKNNYKILLGMIAVGVLYAAWEISRPVEIMDIYIDNFSEGYYSNHIMVKNFPITDKGKLAWWKDNKTMLKEKYGIPKPY QDGRFSISIWDFSDGYKKMPTGDLRLSTDSSDLLCFDEMKTEKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPPVEGGE ITKDAED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19456; Mature: 19456
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNNYKILLGMIAVGVLYAAWEISRPVEIMDIYIDNFSEGYYSNHIMVKNFPITDKGKL CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCEEEEEECCCCCCCCE AWWKDNKTMLKEKYGIPKPYQDGRFSISIWDFSDGYKKMPTGDLRLSTDSSDLLCFDEMK EEEECCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEHHHC TEKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPPVEGGEITKDAED CHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKNNYKILLGMIAVGVLYAAWEISRPVEIMDIYIDNFSEGYYSNHIMVKNFPITDKGKL CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCEEEEEECCCCCCCCE AWWKDNKTMLKEKYGIPKPYQDGRFSISIWDFSDGYKKMPTGDLRLSTDSSDLLCFDEMK EEEECCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEHHHC TEKNCIDKNWIMDIEKIRDDRIFFSMGNSSYQQPPVEGGEITKDAED CHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA