| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022327
Identifier: 170022327
GI number: 170022327
Start: 74300
End: 75067
Strand: Reverse
Name: 170022327
Synonym: YPK_0065
Alternate gene names: NA
Gene position: 75067-74300 (Counterclockwise)
Preceding gene: 170022330
Following gene: 170022326
Centisome position: 1.6
GC content: 37.5
Gene sequence:
>768_bases ATGACCAATGCTGAACAGCTTTTCATAAATTACCCTGATAATAAATTTTGGAAAACCACCGACAAATTACGCGCTGACAT CGACATAGCTAACTACAACAATTTGATTTTTGGTCTAATTTTACCAAAAAATATTTCTAATGCTTTCGAAATCAGCCAGA AAGAACTGACCACATTATTTTGTGAAATCAAAAATCCGGACGAAATTTGTGCGATCTCACATGAAGATTATGAGCCAAAT GAAGACGATACCCAAGCTATTCAGGAAGAACTAATAGTCGAAGATCATTACATTGAAAAGAATATCTTCTGGATGCCTAA AGCAGCTCGATGGGACATACGGAAAAACAAAGCTATTCCACAGATCGGTACAGCATTGTGGGTTAATACAGCAACTGAGC AGGGCGTGAAGCTGCGTTCCGCCTCTTGGCTGGGGAACAGCCCACTTGATGAAATCGAAAAAACTAACACAAAACTAAAA AGCAGTTTTAACCATATCAGTCAATACCGAGTTGGCAATAAAGTTCTAACTACGCTGATTAACGCCGTCTCTGATATTAA TTTCAATAATCCCGAATATAATAATCTTAAAAGTAAGGGTATTTACGGCTATGTATACGAATATTTCCTCAACCAATTTG CATTTGATGAAGAAAAACAGGGCGGTCAATGTTACACACCAAAAAAGTACCATTGCTCTGATTGTCAAAATGCTGCAACT ATACAACGGTCGTGTACATACCTTTACAACGGTTTTCGAACCAAGTAA
Upstream 100 bases:
>100_bases GATTATAATTTGTAGTTATGTTGATTGGAGATATTACTTGGCTTTCTCTTTTTATAGTATAGATTTGACGCTGTCATTGA TGACATTTTTAAGGATTTAA
Downstream 100 bases:
>100_bases AAATTAGTAACTTATTATTAACATATTAAAAAGGTGTACTATGTCAGAACAACTTACAGAAAACCAAAAAAAAATCAAAG ATGAACTGGAAATTGCTAGA
Product: N4/N6-methyltransferase family protein
Products: NA
Alternate protein names: M.HindVIIP [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTNAEQLFINYPDNKFWKTTDKLRADIDIANYNNLIFGLILPKNISNAFEISQKELTTLFCEIKNPDEICAISHEDYEPN EDDTQAIQEELIVEDHYIEKNIFWMPKAARWDIRKNKAIPQIGTALWVNTATEQGVKLRSASWLGNSPLDEIEKTNTKLK SSFNHISQYRVGNKVLTTLINAVSDINFNNPEYNNLKSKGIYGYVYEYFLNQFAFDEEKQGGQCYTPKKYHCSDCQNAAT IQRSCTYLYNGFRTK
Sequences:
>Translated_255_residues MTNAEQLFINYPDNKFWKTTDKLRADIDIANYNNLIFGLILPKNISNAFEISQKELTTLFCEIKNPDEICAISHEDYEPN EDDTQAIQEELIVEDHYIEKNIFWMPKAARWDIRKNKAIPQIGTALWVNTATEQGVKLRSASWLGNSPLDEIEKTNTKLK SSFNHISQYRVGNKVLTTLINAVSDINFNNPEYNNLKSKGIYGYVYEYFLNQFAFDEEKQGGQCYTPKKYHCSDCQNAAT IQRSCTYLYNGFRTK >Mature_254_residues TNAEQLFINYPDNKFWKTTDKLRADIDIANYNNLIFGLILPKNISNAFEISQKELTTLFCEIKNPDEICAISHEDYEPNE DDTQAIQEELIVEDHYIEKNIFWMPKAARWDIRKNKAIPQIGTALWVNTATEQGVKLRSASWLGNSPLDEIEKTNTKLKS SFNHISQYRVGNKVLTTLINAVSDINFNNPEYNNLKSKGIYGYVYEYFLNQFAFDEEKQGGQCYTPKKYHCSDCQNAATI QRSCTYLYNGFRTK
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002296 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 29549; Mature: 29418
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAEQLFINYPDNKFWKTTDKLRADIDIANYNNLIFGLILPKNISNAFEISQKELTTLF CCCCCEEEEECCCCCCCCCHHHHHEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHEEEE CEIKNPDEICAISHEDYEPNEDDTQAIQEELIVEDHYIEKNIFWMPKAARWDIRKNKAIP EEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCCCCCC QIGTALWVNTATEQGVKLRSASWLGNSPLDEIEKTNTKLKSSFNHISQYRVGNKVLTTLI CCCCEEEEECCHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH NAVSDINFNNPEYNNLKSKGIYGYVYEYFLNQFAFDEEKQGGQCYTPKKYHCSDCQNAAT HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH IQRSCTYLYNGFRTK HHHHHHHHHCCCCCC >Mature Secondary Structure TNAEQLFINYPDNKFWKTTDKLRADIDIANYNNLIFGLILPKNISNAFEISQKELTTLF CCCCEEEEECCCCCCCCCHHHHHEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHEEEE CEIKNPDEICAISHEDYEPNEDDTQAIQEELIVEDHYIEKNIFWMPKAARWDIRKNKAIP EEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCCCCCC QIGTALWVNTATEQGVKLRSASWLGNSPLDEIEKTNTKLKSSFNHISQYRVGNKVLTTLI CCCCEEEEECCHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH NAVSDINFNNPEYNNLKSKGIYGYVYEYFLNQFAFDEEKQGGQCYTPKKYHCSDCQNAAT HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH IQRSCTYLYNGFRTK HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]