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The map label for this gene is yidA [H]

Identifier: 170022267

GI number: 170022267

Start: 6402

End: 7211

Strand: Direct

Name: yidA [H]

Synonym: YPK_0005

Alternate gene names: 170022267

Gene position: 6402-7211 (Clockwise)

Preceding gene: 170022266

Following gene: 170022268

Centisome position: 0.14

GC content: 47.9

Gene sequence:

>810_bases
ATGGCTATTGAACTGATCGCTATTGATATGGATGGCACGTTGCTGAATCCACAGCATGAAATTACGCCACGGGTAAAGCA
GGCGATTGCTGCTGCCAGGGCTAAAGGCGTCTGTGTGGTGCTGGCCACTGGTCGGCCTTATATTGGGGTTCAACGTTATT
TACGTGAACTGAATATGGAGAACAGTGGCGATTATTGCATCAGTAACAACGGTGCATTAGTACAAAAGGCGGCGACTGGC
GAGTGTATTTTACAAGAGACTCTCAGTTTTGAGGATTATCTCTATTTTGAAGCGTTATCCCGTGAGTTGGGGGTTAGTTT
CCAGGCCTTTGATTTCAATACATTGTATACCGCCAACAAGGACATCAGTAAATATACGCTTCATGAAGTGATGTTGACGG
GGATCCCTCTGAAGTACCGGGCAGTAGAGGAGATGGATCCAACATTACGTTTCCCTAAAGTGATGATGATTGATGAGCCA
GAGCGGTTGGATCGTGCATTGGCTATGATGCCTGCCGAAGTATTTGAGCGTTTTACTATTATGAAGAGTGCGCCATTTTA
TCTGGAAATCCTGAGTAAGCGGGTGGATAAAGGTACTGGCGTGAAAATGCTGGCTGAGCATTTAGGCATTGCGCAGGAAA
ATGTCATGGCGTTGGGTGATCAGGGGAATGACATCGCAATGGTTAACTACGCCGGAGTGGGGGTTGCCATGGGGAATGCG
ATCCCTGAGCTGAAGGAGATAGCGCAGTATGTGACGGGGACCAACTGCGAGGATGGTGTGGCGACTGCGATTGAGAAGTA
TATTGGCTGA

Upstream 100 bases:

>100_bases
TTTCTCATTCTGATGCTATTTGCCTGTGCTTAGACTTACTGGCATTTGTGTGCTGAATCGCGTTAGCATGAGATATTCGT
TAAATATAGATGAGGGCCCT

Downstream 100 bases:

>100_bases
TTATTTGTATTTTTTATTTATATTTTTGATTGGGTGATTTGAGTCGGTGATCGGGTTCGGTTGATATTCGTTCAGTGATC
ACCTAATCACAGTCGTCTCG

Product: sugar phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAIELIAIDMDGTLLNPQHEITPRVKQAIAAARAKGVCVVLATGRPYIGVQRYLRELNMENSGDYCISNNGALVQKAATG
ECILQETLSFEDYLYFEALSRELGVSFQAFDFNTLYTANKDISKYTLHEVMLTGIPLKYRAVEEMDPTLRFPKVMMIDEP
ERLDRALAMMPAEVFERFTIMKSAPFYLEILSKRVDKGTGVKMLAEHLGIAQENVMALGDQGNDIAMVNYAGVGVAMGNA
IPELKEIAQYVTGTNCEDGVATAIEKYIG

Sequences:

>Translated_269_residues
MAIELIAIDMDGTLLNPQHEITPRVKQAIAAARAKGVCVVLATGRPYIGVQRYLRELNMENSGDYCISNNGALVQKAATG
ECILQETLSFEDYLYFEALSRELGVSFQAFDFNTLYTANKDISKYTLHEVMLTGIPLKYRAVEEMDPTLRFPKVMMIDEP
ERLDRALAMMPAEVFERFTIMKSAPFYLEILSKRVDKGTGVKMLAEHLGIAQENVMALGDQGNDIAMVNYAGVGVAMGNA
IPELKEIAQYVTGTNCEDGVATAIEKYIG
>Mature_268_residues
AIELIAIDMDGTLLNPQHEITPRVKQAIAAARAKGVCVVLATGRPYIGVQRYLRELNMENSGDYCISNNGALVQKAATGE
CILQETLSFEDYLYFEALSRELGVSFQAFDFNTLYTANKDISKYTLHEVMLTGIPLKYRAVEEMDPTLRFPKVMMIDEPE
RLDRALAMMPAEVFERFTIMKSAPFYLEILSKRVDKGTGVKMLAEHLGIAQENVMALGDQGNDIAMVNYAGVGVAMGNAI
PELKEIAQYVTGTNCEDGVATAIEKYIG

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=64.5522388059701, Blast_Score=356, Evalue=1e-100,
Organism=Escherichia coli, GI87081741, Length=245, Percent_Identity=29.7959183673469, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787043, Length=275, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081790, Length=272, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29740; Mature: 29609

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIELIAIDMDGTLLNPQHEITPRVKQAIAAARAKGVCVVLATGRPYIGVQRYLRELNME
CEEEEEEEECCCCEECCCHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCC
NSGDYCISNNGALVQKAATGECILQETLSFEDYLYFEALSRELGVSFQAFDFNTLYTANK
CCCCEEECCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCC
DISKYTLHEVMLTGIPLKYRAVEEMDPTLRFPKVMMIDEPERLDRALAMMPAEVFERFTI
CHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
MKSAPFYLEILSKRVDKGTGVKMLAEHLGIAQENVMALGDQGNDIAMVNYAGVGVAMGNA
HCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCCCCCEEEEEECCCCCHHCCC
IPELKEIAQYVTGTNCEDGVATAIEKYIG
CHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AIELIAIDMDGTLLNPQHEITPRVKQAIAAARAKGVCVVLATGRPYIGVQRYLRELNME
EEEEEEEECCCCEECCCHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCC
NSGDYCISNNGALVQKAATGECILQETLSFEDYLYFEALSRELGVSFQAFDFNTLYTANK
CCCCEEECCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCC
DISKYTLHEVMLTGIPLKYRAVEEMDPTLRFPKVMMIDEPERLDRALAMMPAEVFERFTI
CHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
MKSAPFYLEILSKRVDKGTGVKMLAEHLGIAQENVMALGDQGNDIAMVNYAGVGVAMGNA
HCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCCCCCEEEEEECCCCCHHCCC
IPELKEIAQYVTGTNCEDGVATAIEKYIG
CHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]