| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630951
Identifier: 169630951
GI number: 169630951
Start: 3923127
End: 3924506
Strand: Reverse
Name: 169630951
Synonym: MAB_3872c
Alternate gene names: NA
Gene position: 3924506-3923127 (Counterclockwise)
Preceding gene: 169630952
Following gene: 169630950
Centisome position: 77.45
GC content: 65.8
Gene sequence:
>1380_bases ATGAATCTGGCCGTACGGCACGTGGTAATCGCGTGCACTGCATTGTTCGTGGCGAGGCTGACCATGCTGGACCATGGTCT GGCTGCGGTGTGGGGAGTCGACCGAGGTGAAGACGCCCTCGGCACGATCGAATGGGCGACCGTCGCAGGCGACATAGTCG CCGTGGTGACATTGCTCGTGTTCGCCCGCCTGGGCAATCATTTCCGCCCCACCACCTTCTTGGCTACCGGCCTGGTGATT CTGGGCCTGTCGACGGCCGGGTCACTCATACCGGGATCGGCGACGTTGCTTGCCTGGGTGATGTTGGTCTCGGCGCTGGG CGCCGGACTGACCATGGTGGCCTCCATGCTGATCGTCCTGCATTCGACGCCGAGACAGGGACGTGGGTTCTCGCTGGGGT TTTGGGTGGCGATGTACCCGCTGGCGATGCTCGCCGGCCAGATACTCGACATCAATTCGCCGCAGAATTGGCGCTCGATC ACGTACGGAATCCTTGCCGCGACCGTCGTGGTGCTGGTGGTGGTCCTCACCCAGCCGCATCGCGAGTTCGTGGGCACCTT CGACACATTCGACCTCGTCGGTGCGCTGCTGTGGCTGGTCGGTGTCTCCGCGCTGGCATGGCTCCTGGTCGACGACTCAT CGCCGGCGCGGGCGGTCATTCTCGGGATCATCGCATTGAGCGCCTTCGGCGGGCTCTTCGCGCAGACCCGGCGCAGGGGC TCGGCCGCGCTGATCGCCATCGACGTACTCACCCGCCCCGTCGTGTTGGCGGCGCTGCTGGCGATCACCGTGCTGACATT CCTGGTGCGGTTCGCGGACTTCGACCACGCGGCCATGTGGTGGTCCATCGATCGTGAGTTGGCGCCCTCAGATGCACCGC CGGTAGCGCTTTTTGCCGCTGGACTGGTCTTCGCCCCGCTCGCCGGTTACCTCATCGACGCGGGAAAACGCACGCTCATC GCGGTGCTGGGCACGGTGCTACTGGTGGCCGGCGTGGCGGCGACCGTGATCGAACTGCATGCCGCCAGCACAGAGAGCGG CTTGATATTGGGCCTGCTGCTGTCCGGGGCCGGCATCTCCACGCTGGCCGTCTACCTGTTCTATGCCGTGTTCCACGGGG TCTCTCCTGTGCAGCTGACCGTGGTGGGTGGCTTGGCGGTGACGGCGTCCGCGCTCGGAGTGGTGCTGGGTGAGTTCGTC CGGCAGCGCGCGGAGATAGACCTGCTGACCGGGTATGGCCTCGGGCACCCGAGTGTCTTCGCCGATATCGTCGGGCTGAT TGTCGTGCTTGTCGCGCTGTTGGCCGGAGCATTGCTCATCGTGGAGCGCCGGCGCGGTAGCTCGGCCGCCGCGACACCCG CCGAATCCACGTCGGACTAG
Upstream 100 bases:
>100_bases GCGACGCTACCGACGGGTAGGTTGCCCCGGCGATCACCGCTATCGCAGGACGAATGTGGCTGGGGCCCATAGAGTGACCT CACGAGAGGGTGAAGGTGAC
Downstream 100 bases:
>100_bases GGGCGTAGTGGCTGGTTATCACAGTTAGCCAGTCAATGCGCCTGGTATGGACGCAAACGCGATGCAGTTCTGGGCCATGC GCTAAAGTGATCCGAACCAC
Product: drug-transport integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MNLAVRHVVIACTALFVARLTMLDHGLAAVWGVDRGEDALGTIEWATVAGDIVAVVTLLVFARLGNHFRPTTFLATGLVI LGLSTAGSLIPGSATLLAWVMLVSALGAGLTMVASMLIVLHSTPRQGRGFSLGFWVAMYPLAMLAGQILDINSPQNWRSI TYGILAATVVVLVVVLTQPHREFVGTFDTFDLVGALLWLVGVSALAWLLVDDSSPARAVILGIIALSAFGGLFAQTRRRG SAALIAIDVLTRPVVLAALLAITVLTFLVRFADFDHAAMWWSIDRELAPSDAPPVALFAAGLVFAPLAGYLIDAGKRTLI AVLGTVLLVAGVAATVIELHAASTESGLILGLLLSGAGISTLAVYLFYAVFHGVSPVQLTVVGGLAVTASALGVVLGEFV RQRAEIDLLTGYGLGHPSVFADIVGLIVVLVALLAGALLIVERRRGSSAAATPAESTSD
Sequences:
>Translated_459_residues MNLAVRHVVIACTALFVARLTMLDHGLAAVWGVDRGEDALGTIEWATVAGDIVAVVTLLVFARLGNHFRPTTFLATGLVI LGLSTAGSLIPGSATLLAWVMLVSALGAGLTMVASMLIVLHSTPRQGRGFSLGFWVAMYPLAMLAGQILDINSPQNWRSI TYGILAATVVVLVVVLTQPHREFVGTFDTFDLVGALLWLVGVSALAWLLVDDSSPARAVILGIIALSAFGGLFAQTRRRG SAALIAIDVLTRPVVLAALLAITVLTFLVRFADFDHAAMWWSIDRELAPSDAPPVALFAAGLVFAPLAGYLIDAGKRTLI AVLGTVLLVAGVAATVIELHAASTESGLILGLLLSGAGISTLAVYLFYAVFHGVSPVQLTVVGGLAVTASALGVVLGEFV RQRAEIDLLTGYGLGHPSVFADIVGLIVVLVALLAGALLIVERRRGSSAAATPAESTSD >Mature_459_residues MNLAVRHVVIACTALFVARLTMLDHGLAAVWGVDRGEDALGTIEWATVAGDIVAVVTLLVFARLGNHFRPTTFLATGLVI LGLSTAGSLIPGSATLLAWVMLVSALGAGLTMVASMLIVLHSTPRQGRGFSLGFWVAMYPLAMLAGQILDINSPQNWRSI TYGILAATVVVLVVVLTQPHREFVGTFDTFDLVGALLWLVGVSALAWLLVDDSSPARAVILGIIALSAFGGLFAQTRRRG SAALIAIDVLTRPVVLAALLAITVLTFLVRFADFDHAAMWWSIDRELAPSDAPPVALFAAGLVFAPLAGYLIDAGKRTLI AVLGTVLLVAGVAATVIELHAASTESGLILGLLLSGAGISTLAVYLFYAVFHGVSPVQLTVVGGLAVTASALGVVLGEFV RQRAEIDLLTGYGLGHPSVFADIVGLIVVLVALLAGALLIVERRRGSSAAATPAESTSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47721; Mature: 47721
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLAVRHVVIACTALFVARLTMLDHGLAAVWGVDRGEDALGTIEWATVAGDIVAVVTLLV CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FARLGNHFRPTTFLATGLVILGLSTAGSLIPGSATLLAWVMLVSALGAGLTMVASMLIVL HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH HSTPRQGRGFSLGFWVAMYPLAMLAGQILDINSPQNWRSITYGILAATVVVLVVVLTQPH HCCCCCCCCCCHHHHHHHHHHHHHHCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCH REFVGTFDTFDLVGALLWLVGVSALAWLLVDDSSPARAVILGIIALSAFGGLFAQTRRRG HHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SAALIAIDVLTRPVVLAALLAITVLTFLVRFADFDHAAMWWSIDRELAPSDAPPVALFAA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCHHHHHH GLVFAPLAGYLIDAGKRTLIAVLGTVLLVAGVAATVIELHAASTESGLILGLLLSGAGIS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHH TLAVYLFYAVFHGVSPVQLTVVGGLAVTASALGVVLGEFVRQRAEIDLLTGYGLGHPSVF HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHH ADIVGLIVVLVALLAGALLIVERRRGSSAAATPAESTSD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLAVRHVVIACTALFVARLTMLDHGLAAVWGVDRGEDALGTIEWATVAGDIVAVVTLLV CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FARLGNHFRPTTFLATGLVILGLSTAGSLIPGSATLLAWVMLVSALGAGLTMVASMLIVL HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH HSTPRQGRGFSLGFWVAMYPLAMLAGQILDINSPQNWRSITYGILAATVVVLVVVLTQPH HCCCCCCCCCCHHHHHHHHHHHHHHCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCH REFVGTFDTFDLVGALLWLVGVSALAWLLVDDSSPARAVILGIIALSAFGGLFAQTRRRG HHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SAALIAIDVLTRPVVLAALLAITVLTFLVRFADFDHAAMWWSIDRELAPSDAPPVALFAA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCHHHHHH GLVFAPLAGYLIDAGKRTLIAVLGTVLLVAGVAATVIELHAASTESGLILGLLLSGAGIS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHH TLAVYLFYAVFHGVSPVQLTVVGGLAVTASALGVVLGEFVRQRAEIDLLTGYGLGHPSVF HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHH ADIVGLIVVLVALLAGALLIVERRRGSSAAATPAESTSD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA