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The map label for this gene is asnC [H]

Identifier: 169630918

GI number: 169630918

Start: 3885201

End: 3885653

Strand: Reverse

Name: asnC [H]

Synonym: MAB_3839c

Alternate gene names: 169630918

Gene position: 3885653-3885201 (Counterclockwise)

Preceding gene: 169630923

Following gene: 169630917

Centisome position: 76.68

GC content: 65.12

Gene sequence:

>453_bases
ATGGCAGAGCTGGACGCCACCGACGAGCGGATCGTGACCCTGTTGATGCGCAACGCCCGGGCGACATTCGCCGAAATAGG
GGAGGAGGTCAACCTTTCGGCTCCCGCGGTCAAACGACGGGTTGACCGGCTGGTCGGGACGGGAGTCATCAAGGGCTTCA
CCACCGTGGTGGACCGCGCGGCTGTCGGCTGGAACACCGAGGCCTATGTCCAGGTCTACTGCCAGGGCACTATCACTCCG
GAAGCCTTGCGGCGCGCGTGGATCGATATTCCAGAGGTGGTGAGCGCGGCGACGGTGACCGGAACCTCGGACGCGATGCT
CAGGGTCTTGGCACGCGATATCCAGCACCTGGAACGGGCACTGGAACGCATCCGCGCCAGCGGGGATATCGACCGCACCG
AGAGCATCGTGGTGCTTTCCAACCTGGTGGACCGGGCGCAGGTGCAGGGGTGA

Upstream 100 bases:

>100_bases
TCTTTATCCATTGCGCGGCAGTGTTCGATTCATTGCGTCTAGGCGAGGAATTTGGCAGTCTATTGCAGAATCGCGCGGGA
TCATTGAAGGAAGGACTCCC

Downstream 100 bases:

>100_bases
TAGGGCTGACATCGCGCGTGTCCAGTCGTGTATGAAGAAACCCATGACCGACGCGGAACGTGGAGTGCTGATCATCGGTG
GTGGGCTGGGCGCGGTACGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAELDATDERIVTLLMRNARATFAEIGEEVNLSAPAVKRRVDRLVGTGVIKGFTTVVDRAAVGWNTEAYVQVYCQGTITP
EALRRAWIDIPEVVSAATVTGTSDAMLRVLARDIQHLERALERIRASGDIDRTESIVVLSNLVDRAQVQG

Sequences:

>Translated_150_residues
MAELDATDERIVTLLMRNARATFAEIGEEVNLSAPAVKRRVDRLVGTGVIKGFTTVVDRAAVGWNTEAYVQVYCQGTITP
EALRRAWIDIPEVVSAATVTGTSDAMLRVLARDIQHLERALERIRASGDIDRTESIVVLSNLVDRAQVQG
>Mature_149_residues
AELDATDERIVTLLMRNARATFAEIGEEVNLSAPAVKRRVDRLVGTGVIKGFTTVVDRAAVGWNTEAYVQVYCQGTITPE
ALRRAWIDIPEVVSAATVTGTSDAMLRVLARDIQHLERALERIRASGDIDRTESIVVLSNLVDRAQVQG

Specific function: Activator of asnA transcription [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=144, Percent_Identity=27.0833333333333, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16434; Mature: 16303

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELDATDERIVTLLMRNARATFAEIGEEVNLSAPAVKRRVDRLVGTGVIKGFTTVVDRA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGWNTEAYVQVYCQGTITPEALRRAWIDIPEVVSAATVTGTSDAMLRVLARDIQHLERA
HCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LERIRASGDIDRTESIVVLSNLVDRAQVQG
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AELDATDERIVTLLMRNARATFAEIGEEVNLSAPAVKRRVDRLVGTGVIKGFTTVVDRA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGWNTEAYVQVYCQGTITPEALRRAWIDIPEVVSAATVTGTSDAMLRVLARDIQHLERA
HCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LERIRASGDIDRTESIVVLSNLVDRAQVQG
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]