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The map label for this gene is 169630916

Identifier: 169630916

GI number: 169630916

Start: 3883360

End: 3883956

Strand: Direct

Name: 169630916

Synonym: MAB_3837

Alternate gene names: NA

Gene position: 3883360-3883956 (Clockwise)

Preceding gene: 169630905

Following gene: 169630919

Centisome position: 76.64

GC content: 63.48

Gene sequence:

>597_bases
ATGAACGCGCAGCCGGCGCGCGTAGGACGACGCCCTTCGACGACCCGCGATGAGATCACCGCGGTGGCTATGACGCTGTT
CGCGCAGCATGGCTTCGACGAGGTGAGCGTCGACGATATCGCCGCGGCGGCCGGAATCGCCCGGCGTACGGTATTTCGGT
ATTACAGCTCGAAGAACGCAATCGTGTGGGGAGACTTCGACTCTCACCTCGGGGTGATGCGCGCACTCTTGGATGAGACA
GCGGACACGGTGGACACCAGTACCGCGTTGCGTCAAGCCGTGTTGACGTTCAACGACTTTCCGGTCGATGAGACTCCACG
ACACCGCATGCGGATGCGGATGATCCTGGAAGTCCCGGCATTACAGGCATATTCGATGCTGATGTACACCGGATGGCGCG
ATGTGATCGCACAATTCGTGGCCCGACGCAGCGGTACAGATCCCGGCTCGCTGCTGCCGCAGACCGTGGCCTGGACCCTG
CTGGGCGTGGCGCTCGCGGCGTATGAACAATGGCTCGCCGACGAGTCCTCGAAGCTCACCACGCTGCTCGGCAAGGGCTT
CGATGCCGCCGAGGTGGGGCTGCGCGCCCTGCGCTAA

Upstream 100 bases:

>100_bases
TTCACTCCCTTGTGAGTCTGGACTGTGGCGACGGTCACGATAATAATGGCATCGAGTGCAGAAAGGGAAGAGGGTGTCAG
AAAATGGCAGACTCCTCGGC

Downstream 100 bases:

>100_bases
TCCCCTAAGACCCCGCGAGTACCTCGGCGATCGGTGTTCCGGCCGCGATCTTGGCCCGCATCTTCATCACCGGGCCTGCC
ATGCCGCAGCCCACGACCCC

Product: transcriptional regulatory protein TetR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulatory Protein; Transcriptional Regulatory Protein TetR; AcrR Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNAQPARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIAAAAGIARRTVFRYYSSKNAIVWGDFDSHLGVMRALLDET
ADTVDTSTALRQAVLTFNDFPVDETPRHRMRMRMILEVPALQAYSMLMYTGWRDVIAQFVARRSGTDPGSLLPQTVAWTL
LGVALAAYEQWLADESSKLTTLLGKGFDAAEVGLRALR

Sequences:

>Translated_198_residues
MNAQPARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIAAAAGIARRTVFRYYSSKNAIVWGDFDSHLGVMRALLDET
ADTVDTSTALRQAVLTFNDFPVDETPRHRMRMRMILEVPALQAYSMLMYTGWRDVIAQFVARRSGTDPGSLLPQTVAWTL
LGVALAAYEQWLADESSKLTTLLGKGFDAAEVGLRALR
>Mature_198_residues
MNAQPARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIAAAAGIARRTVFRYYSSKNAIVWGDFDSHLGVMRALLDET
ADTVDTSTALRQAVLTFNDFPVDETPRHRMRMRMILEVPALQAYSMLMYTGWRDVIAQFVARRSGTDPGSLLPQTVAWTL
LGVALAAYEQWLADESSKLTTLLGKGFDAAEVGLRALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21900; Mature: 21900

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQPARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIAAAAGIARRTVFRYYSSKNA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IVWGDFDSHLGVMRALLDETADTVDTSTALRQAVLTFNDFPVDETPRHRMRMRMILEVPA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LQAYSMLMYTGWRDVIAQFVARRSGTDPGSLLPQTVAWTLLGVALAAYEQWLADESSKLT
HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLLGKGFDAAEVGLRALR
HHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MNAQPARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIAAAAGIARRTVFRYYSSKNA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IVWGDFDSHLGVMRALLDETADTVDTSTALRQAVLTFNDFPVDETPRHRMRMRMILEVPA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LQAYSMLMYTGWRDVIAQFVARRSGTDPGSLLPQTVAWTLLGVALAAYEQWLADESSKLT
HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLLGKGFDAAEVGLRALR
HHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA