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The map label for this gene is pqqE [H]

Identifier: 169630914

GI number: 169630914

Start: 3881590

End: 3882834

Strand: Reverse

Name: pqqE [H]

Synonym: MAB_3835c

Alternate gene names: 169630914

Gene position: 3882834-3881590 (Counterclockwise)

Preceding gene: 169630915

Following gene: 169630913

Centisome position: 76.63

GC content: 64.26

Gene sequence:

>1245_bases
ATGAGCGCTCCCGCAGTACCCCGCCTCAATGTCGCCGCCGTTGCGGCTCCGAAACTGGTGGATCAGTTCGAGCAGGGGCT
GGATGCCCCGATCTGCCTCACCTGGGAACTGACCTACGCCTGCAACTTGTCTTGTGTGCACTGCCTGTCTTCGTCGGGCA
AGCGCGACCCGCGCGAGCTGTCCACGCAGCAGTGCAAGGACATCATCGACGAGCTCGAGCGCATGCAGGTGTTCTACGTG
AACATCGGCGGCGGGGAACCCACTGTGCGGTCGGACTTTTGGGAGCTTGTCGATTACGCAACCGAGCACCATGTGGGAGT
CAAGTTCTCGACCAACGGTGTGCGCATCACCGAAGAGGTTGCAGCCCGGCTAGCGGCGAGCGACTACGTAGACGTTCAGA
TATCGCTGGATGGCGCGACCGCGGAGGTGAACGATGCGGTGCGTGGCGCGGGCTCGTTCGACATGGCGGTGCGCGCGTTG
GAGAACCTGGCGGCAGCCGGATTCAAAGACGCGAAGATCTCAGTGGTGGTCACTCGCCACAACGTGGACCAGCTCGATGA
GTTCGCCTCCCTGGCAGCAAGATACGGTGCGACACTGCGGATCACGCGGTTACGTCCGTCGGGTCGCGGCGCCGACGTGT
GGGACGAACTGCATCCGACTGCGGCGCAGCAGCGCCAGTTATACGACTGGCTGGTGCGCAACGGCGAGCGGGTGCTCACA
GGCGACTCCTTCTTCCACCTCTCGGCCTATGGCGACGGGTCCGGTGGTTTGCCGGGCCTCAACATGTGCGGCGCGGGCCG
GGTGGTGTGCCTGATCGACCCGGTGGGTGATGTATATGCCTGCCCGTTCGCGATCCACGATCGGTTCCTTGCTGGCAATG
TGTTGTCCGACAATGGATTTGACCAGGTATGGAAGCACTCGCAGTTGTTCAGCGAGCTGCGTGAGCCGCAGTCCGCAGGT
GCCTGTGGCAGCTGCGGACACTACGACAGCTGCCGTGGCGGTTGCATGGCTGCCAAGTTCTTCACCGGGCTCCCGATGGA
CGGGCCCGACCCGGAATGCGTGCAGGGCTACGGCGAGGCGGCCCTTGCTGCCGACCGAGTGGTCCCCAAACCCAGTGGTG
ACCACTCGCATTCGAAGAGCAAGCGTGGCCCCGCCACGGGTCCGGTCGCGCTGACGCTGACGCGTCGACCGCCCTCGCGC
GCATGCGATGAGAACCCTCTTTCCACCCTACGAGCAGGACGGTAG

Upstream 100 bases:

>100_bases
GGCTGGCCGCCGGTGTCGCCGACGGCCAGGTCAGCGCCTACCAACAGGCCCTGACGGTGCTGGCGGATTCCCAGATGATC
GTGACCCGAGAGGACGCCTC

Downstream 100 bases:

>100_bases
ATGGCCCGCAACAAATGGTTCGAGACGGTCGCGATAGCCCAGCAGCGGGCCAAGAAGCGGTTGCCGAAGTCCGTCTACAG
CTCGCTGATCTCGGCCAGTG

Product: coenzyme PQQ synthesis protein E PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSAPAVPRLNVAAVAAPKLVDQFEQGLDAPICLTWELTYACNLSCVHCLSSSGKRDPRELSTQQCKDIIDELERMQVFYV
NIGGGEPTVRSDFWELVDYATEHHVGVKFSTNGVRITEEVAARLAASDYVDVQISLDGATAEVNDAVRGAGSFDMAVRAL
ENLAAAGFKDAKISVVVTRHNVDQLDEFASLAARYGATLRITRLRPSGRGADVWDELHPTAAQQRQLYDWLVRNGERVLT
GDSFFHLSAYGDGSGGLPGLNMCGAGRVVCLIDPVGDVYACPFAIHDRFLAGNVLSDNGFDQVWKHSQLFSELREPQSAG
ACGSCGHYDSCRGGCMAAKFFTGLPMDGPDPECVQGYGEAALAADRVVPKPSGDHSHSKSKRGPATGPVALTLTRRPPSR
ACDENPLSTLRAGR

Sequences:

>Translated_414_residues
MSAPAVPRLNVAAVAAPKLVDQFEQGLDAPICLTWELTYACNLSCVHCLSSSGKRDPRELSTQQCKDIIDELERMQVFYV
NIGGGEPTVRSDFWELVDYATEHHVGVKFSTNGVRITEEVAARLAASDYVDVQISLDGATAEVNDAVRGAGSFDMAVRAL
ENLAAAGFKDAKISVVVTRHNVDQLDEFASLAARYGATLRITRLRPSGRGADVWDELHPTAAQQRQLYDWLVRNGERVLT
GDSFFHLSAYGDGSGGLPGLNMCGAGRVVCLIDPVGDVYACPFAIHDRFLAGNVLSDNGFDQVWKHSQLFSELREPQSAG
ACGSCGHYDSCRGGCMAAKFFTGLPMDGPDPECVQGYGEAALAADRVVPKPSGDHSHSKSKRGPATGPVALTLTRRPPSR
ACDENPLSTLRAGR
>Mature_413_residues
SAPAVPRLNVAAVAAPKLVDQFEQGLDAPICLTWELTYACNLSCVHCLSSSGKRDPRELSTQQCKDIIDELERMQVFYVN
IGGGEPTVRSDFWELVDYATEHHVGVKFSTNGVRITEEVAARLAASDYVDVQISLDGATAEVNDAVRGAGSFDMAVRALE
NLAAAGFKDAKISVVVTRHNVDQLDEFASLAARYGATLRITRLRPSGRGADVWDELHPTAAQQRQLYDWLVRNGERVLTG
DSFFHLSAYGDGSGGLPGLNMCGAGRVVCLIDPVGDVYACPFAIHDRFLAGNVLSDNGFDQVWKHSQLFSELREPQSAGA
CGSCGHYDSCRGGCMAAKFFTGLPMDGPDPECVQGYGEAALAADRVVPKPSGDHSHSKSKRGPATGPVALTLTRRPPSRA
CDENPLSTLRAGR

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

Organism=Escherichia coli, GI1786999, Length=227, Percent_Identity=25.9911894273128, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44503; Mature: 44372

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPAVPRLNVAAVAAPKLVDQFEQGLDAPICLTWELTYACNLSCVHCLSSSGKRDPREL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCHHHH
STQQCKDIIDELERMQVFYVNIGGGEPTVRSDFWELVDYATEHHVGVKFSTNGVRITEEV
HHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHH
AARLAASDYVDVQISLDGATAEVNDAVRGAGSFDMAVRALENLAAAGFKDAKISVVVTRH
HHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC
NVDQLDEFASLAARYGATLRITRLRPSGRGADVWDELHPTAAQQRQLYDWLVRNGERVLT
CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEE
GDSFFHLSAYGDGSGGLPGLNMCGAGRVVCLIDPVGDVYACPFAIHDRFLAGNVLSDNGF
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHCCCCCCCCCH
DQVWKHSQLFSELREPQSAGACGSCGHYDSCRGGCMAAKFFTGLPMDGPDPECVQGYGEA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCHHHHHHCCCH
ALAADRVVPKPSGDHSHSKSKRGPATGPVALTLTRRPPSRACDENPLSTLRAGR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
SAPAVPRLNVAAVAAPKLVDQFEQGLDAPICLTWELTYACNLSCVHCLSSSGKRDPREL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCHHHH
STQQCKDIIDELERMQVFYVNIGGGEPTVRSDFWELVDYATEHHVGVKFSTNGVRITEEV
HHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHH
AARLAASDYVDVQISLDGATAEVNDAVRGAGSFDMAVRALENLAAAGFKDAKISVVVTRH
HHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC
NVDQLDEFASLAARYGATLRITRLRPSGRGADVWDELHPTAAQQRQLYDWLVRNGERVLT
CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEE
GDSFFHLSAYGDGSGGLPGLNMCGAGRVVCLIDPVGDVYACPFAIHDRFLAGNVLSDNGF
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHCCCCCCCCCH
DQVWKHSQLFSELREPQSAGACGSCGHYDSCRGGCMAAKFFTGLPMDGPDPECVQGYGEA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCHHHHHHCCCH
ALAADRVVPKPSGDHSHSKSKRGPATGPVALTLTRRPPSRACDENPLSTLRAGR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12791134 [H]