| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yjeE [C]
Identifier: 169630816
GI number: 169630816
Start: 3790363
End: 3790830
Strand: Reverse
Name: yjeE [C]
Synonym: MAB_3737c
Alternate gene names: 169630816
Gene position: 3790830-3790363 (Counterclockwise)
Preceding gene: 169630817
Following gene: 169630815
Centisome position: 74.81
GC content: 65.17
Gene sequence:
>468_bases GTGATCGATGAATCGGGAAGCGTGGCACTGCCGACGGCTCAGGACACCTTGGAGTTCGGGAAACGGATCGGTCAAGGCCT TGCGGCGGGCGACGTCGTGGTGCTCAGCGGTCCGCTGGGAGCCGGAAAGACGGCATTGACCAAGGGCATCGCCCAGGGCA TGGATGTCGAGGGCCCGGTGACCTCGCCGTCCTACGTATTGGCGCGGGTCCACGAGGCGCGGCGGCCGGGAGCTCCGGCG CTGGTGCATGTGGACGTCTACCGGCTGCTGGAACACCAAAGCGCTGATCTACTGGGCGAACTCGACTCGCTGGATCTGGA CACCGATCTGGATGACTCGGTGGTTGTCGTCGAATGGGGAGAAGGCCTGGCCGAGCGGCTCTCGGAACACCATCTGGACA TCCGGCTGGAGCGTGCCGCCGACTCCGATGAACGCACCGCAACCTGGCATTGGAGCCGCGAATCGTGA
Upstream 100 bases:
>100_bases ACCCCGAGATCGTCAACGATGGCATCGACCGGCTGGTCAGGCGTTCAACACCACCACTTTTCGCCGCGATCAAGCAGCGG CTGCGTGATCGGACCGGGCT
Downstream 100 bases:
>100_bases CCCTGATACTTGCCCTGGACACAGCGACCGCCGCCATCACGGCGGGCCTGGTGCGGCGCGCGCCCGATGGATCGGTGCAG CCGCTGGCTGAACGAATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIDESGSVALPTAQDTLEFGKRIGQGLAAGDVVVLSGPLGAGKTALTKGIAQGMDVEGPVTSPSYVLARVHEARRPGAPA LVHVDVYRLLEHQSADLLGELDSLDLDTDLDDSVVVVEWGEGLAERLSEHHLDIRLERAADSDERTATWHWSRES
Sequences:
>Translated_155_residues MIDESGSVALPTAQDTLEFGKRIGQGLAAGDVVVLSGPLGAGKTALTKGIAQGMDVEGPVTSPSYVLARVHEARRPGAPA LVHVDVYRLLEHQSADLLGELDSLDLDTDLDDSVVVVEWGEGLAERLSEHHLDIRLERAADSDERTATWHWSRES >Mature_155_residues MIDESGSVALPTAQDTLEFGKRIGQGLAAGDVVVLSGPLGAGKTALTKGIAQGMDVEGPVTSPSYVLARVHEARRPGAPA LVHVDVYRLLEHQSADLLGELDSLDLDTDLDDSVVVVEWGEGLAERLSEHHLDIRLERAADSDERTATWHWSRES
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=137, Percent_Identity=28.4671532846715, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16632; Mature: 16632
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDESGSVALPTAQDTLEFGKRIGQGLAAGDVVVLSGPLGAGKTALTKGIAQGMDVEGPV CCCCCCCEECCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC TSPSYVLARVHEARRPGAPALVHVDVYRLLEHQSADLLGELDSLDLDTDLDDSVVVVEWG CCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECC EGLAERLSEHHLDIRLERAADSDERTATWHWSRES CHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure MIDESGSVALPTAQDTLEFGKRIGQGLAAGDVVVLSGPLGAGKTALTKGIAQGMDVEGPV CCCCCCCEECCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC TSPSYVLARVHEARRPGAPALVHVDVYRLLEHQSADLLGELDSLDLDTDLDDSVVVVEWG CCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECC EGLAERLSEHHLDIRLERAADSDERTATWHWSRES CHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]