| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630792
Identifier: 169630792
GI number: 169630792
Start: 3768283
End: 3768975
Strand: Reverse
Name: 169630792
Synonym: MAB_3713c
Alternate gene names: NA
Gene position: 3768975-3768283 (Counterclockwise)
Preceding gene: 169630793
Following gene: 169630791
Centisome position: 74.38
GC content: 69.99
Gene sequence:
>693_bases GTGACGGCAGTGGCGGCCGCCGACGAAGCGCTGGTAAACCGTGCTGACCAGCTGCAAAAGCTTCGGCAGCAGATGGCGGC GATATCGGGGAAGGTCGGTGGGGACCGGTCCGCTGCGGGGCACTTTCCGGAGGCGCTGCCGGATGCACAGTCTTTGCTGC CAGGTTCCGATGCGCTGGCCAGGTCGATAGGTCATGTGTTGCGGCGCGGCACGGTCGCGGTGGCCGGTGGGGCCCGGTCG TTGCCCTTGGAGGTGGTGGCTTCGGTGACGGCCGCGGGCGGTTATGCCGCGATTGTGGGCATGCCCGAGGTGAGCGTGTT GGCCGCGGTGGAGCGGGGGGCGGACCTGAGCCGCCTGGCGTTGATTCCCCGCCCGGGCCTGAGCGCGGTGGAGGTGGCCT CGGTGCTCATGGATGGGATGGATCTGGTGGTGCTGGGTCTGGGAGGGCGCCAGGTGACCTCGACGTCGGCCCGCGCGATA GTGGCCCGGGCGCACAGCAACGGGTGCACGCTGTTGGCTGTCGGCGGGGACTGGGAGGGCGCCTCGGTTCGGTTGCAGGC GCAGATAACCGGTTACGACGGGGTGTCGGCCTGCGGCCTGGGGAGGATTCGTGGGGTGCGGACGGCGGTGCGGGTACGTG GTCGGGGCGGACGGGAGGTGTGTGGCAGTCGTGGTGCGATCAGATCTGCCTGA
Upstream 100 bases:
>100_bases GCTTCTGCTCCCAGCTGCTGCCTTGACGGTTGTCGGTGGCTGGGTGTTTACTCCAGACATCGAACATATGTTCTATTCAA GTGTGCCTGGAGGTGCGGTT
Downstream 100 bases:
>100_bases AAAGCCGAGAAAAGAACGGCGCAAAGCGCCACGGGTGCTGGCTATGTGGTGTCCGGACTGGCCTGCGGTGGCCGCTGCGG CGATGGCAGATCTTCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAAGHFPEALPDAQSLLPGSDALARSIGHVLRRGTVAVAGGARS LPLEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLALIPRPGLSAVEVASVLMDGMDLVVLGLGGRQVTSTSARAI VARAHSNGCTLLAVGGDWEGASVRLQAQITGYDGVSACGLGRIRGVRTAVRVRGRGGREVCGSRGAIRSA
Sequences:
>Translated_230_residues MTAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAAGHFPEALPDAQSLLPGSDALARSIGHVLRRGTVAVAGGARS LPLEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLALIPRPGLSAVEVASVLMDGMDLVVLGLGGRQVTSTSARAI VARAHSNGCTLLAVGGDWEGASVRLQAQITGYDGVSACGLGRIRGVRTAVRVRGRGGREVCGSRGAIRSA >Mature_229_residues TAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAAGHFPEALPDAQSLLPGSDALARSIGHVLRRGTVAVAGGARSL PLEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLALIPRPGLSAVEVASVLMDGMDLVVLGLGGRQVTSTSARAIV ARAHSNGCTLLAVGGDWEGASVRLQAQITGYDGVSACGLGRIRGVRTAVRVRGRGGREVCGSRGAIRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23179; Mature: 23048
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAAGHFPEALPDAQSLLPGSDALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHH RSIGHVLRRGTVAVAGGARSLPLEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLA HHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHEE LIPRPGLSAVEVASVLMDGMDLVVLGLGGRQVTSTSARAIVARAHSNGCTLLAVGGDWEG ECCCCCCHHHHHHHHHHCCCEEEEEECCCCEECCCHHHEEEEEECCCCEEEEEECCCCCC ASVRLQAQITGYDGVSACGLGRIRGVRTAVRVRGRGGREVCGSRGAIRSA CEEEEEEEEECCCCCCHHCCHHHHHHHHEEEECCCCCHHHHCCCCCCCCC >Mature Secondary Structure TAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAAGHFPEALPDAQSLLPGSDALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHH RSIGHVLRRGTVAVAGGARSLPLEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLA HHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHEE LIPRPGLSAVEVASVLMDGMDLVVLGLGGRQVTSTSARAIVARAHSNGCTLLAVGGDWEG ECCCCCCHHHHHHHHHHCCCEEEEEECCCCEECCCHHHEEEEEECCCCEEEEEECCCCCC ASVRLQAQITGYDGVSACGLGRIRGVRTAVRVRGRGGREVCGSRGAIRSA CEEEEEEEEECCCCCCHHCCHHHHHHHHEEEECCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]