| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is folD
Identifier: 169630771
GI number: 169630771
Start: 3746551
End: 3747396
Strand: Reverse
Name: folD
Synonym: MAB_3692c
Alternate gene names: 169630771
Gene position: 3747396-3746551 (Counterclockwise)
Preceding gene: 169630772
Following gene: 169630770
Centisome position: 73.95
GC content: 68.2
Gene sequence:
>846_bases GTGACGGCGACTCGACTTGATGGCAAGGCCACCCGCGATGAGATCTTTGTGGAGCTGGCCACTCGTGCCGCGGCGCTGAA GGCGGCGGGCAAGACACCGGGGCTGGGCACCATCCTGGTGGGTGACGACCCGGGTTCGCACGCCTATGTGCGCGGCAAGC ACGCAGACTGCGCCAAGGTGGGCCTCAACTCGATCCGTCGTGATCTGCCCGCCGATATCGATCAGGCCACACTGTGCGCC ACCATCGACGAGCTGAACGCCAACCCGGATTGCACCGGCTACATCGTGCAGCTGCCGCTGCCCAAGCATCTTGACGAGAA CGAGGCGCTGGAGCGCATCGACCCGGACAAGGACGCCGACGGCCTGCACCCGACGAACCTGGGCCGGCTGGTGCTCGGCA AGGAGGCCCCGCTTCCCTGCACGCCCCGCGGGATCGTGTATCTGCTGCGTCGCTATGACGTGAAGCTCGACGGGGCACAC GTCGTGGTGATCGGTCGCGGTGTCACGGTGGGGCGTCCACTCGGGCTGCTGCTGACCCGGCGCTCGGAGAACGCGACAGT CACCCTGTGCCACACCGGAACCCGTGATCTGGCCGCGCTGACCCGGCAGGCCGACATCATCGTGGCGGCCGCCGGTGTGC CGCACATGGTGACGGCGGACATGGTCAAGCCGGGTGCCGCGGTGGTCGACGTCGGCGTGAGCCGGGTCGACGACAAGCTA ACCGGCGACGTGGCCGAGGATGTCTGGGACGTGGCCGGGTACGTCTCGCCCAACCCCGGCGGAGTCGGGCCGCTGACCCG GGCCTTCTTGCTCACCAATGTGATCGAGCGGGCGGAACGTTCGTGA
Upstream 100 bases:
>100_bases GCCAAGCGTCAGCCACTCGCCGACGTCCTGCACTGGGACACGTGGTGAGGGGCGATGAGCCGCTTGCGCGAAGAGCTGTA GGCCCAGGAATACTAGCCGT
Downstream 100 bases:
>100_bases CCGCCCTGCAACCCGGGCCGCGGCGTCTTCTCCCGACAGCGTTGGACGCGATCCAGCGGTTCGCCCGTGAGCAGTGGCCG ATCCTGGTGGTCTCGGCGGT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase FolD
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTATRLDGKATRDEIFVELATRAAALKAAGKTPGLGTILVGDDPGSHAYVRGKHADCAKVGLNSIRRDLPADIDQATLCA TIDELNANPDCTGYIVQLPLPKHLDENEALERIDPDKDADGLHPTNLGRLVLGKEAPLPCTPRGIVYLLRRYDVKLDGAH VVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLAALTRQADIIVAAAGVPHMVTADMVKPGAAVVDVGVSRVDDKL TGDVAEDVWDVAGYVSPNPGGVGPLTRAFLLTNVIERAERS
Sequences:
>Translated_281_residues MTATRLDGKATRDEIFVELATRAAALKAAGKTPGLGTILVGDDPGSHAYVRGKHADCAKVGLNSIRRDLPADIDQATLCA TIDELNANPDCTGYIVQLPLPKHLDENEALERIDPDKDADGLHPTNLGRLVLGKEAPLPCTPRGIVYLLRRYDVKLDGAH VVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLAALTRQADIIVAAAGVPHMVTADMVKPGAAVVDVGVSRVDDKL TGDVAEDVWDVAGYVSPNPGGVGPLTRAFLLTNVIERAERS >Mature_280_residues TATRLDGKATRDEIFVELATRAAALKAAGKTPGLGTILVGDDPGSHAYVRGKHADCAKVGLNSIRRDLPADIDQATLCAT IDELNANPDCTGYIVQLPLPKHLDENEALERIDPDKDADGLHPTNLGRLVLGKEAPLPCTPRGIVYLLRRYDVKLDGAHV VVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLAALTRQADIIVAAAGVPHMVTADMVKPGAAVVDVGVSRVDDKLT GDVAEDVWDVAGYVSPNPGGVGPLTRAFLLTNVIERAERS
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=41.8367346938776, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI222418558, Length=265, Percent_Identity=43.0188679245283, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI222136639, Length=292, Percent_Identity=35.958904109589, Blast_Score=167, Evalue=9e-42, Organism=Homo sapiens, GI36796743, Length=241, Percent_Identity=27.3858921161826, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=43.3691756272401, Blast_Score=211, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17568735, Length=258, Percent_Identity=39.5348837209302, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319558, Length=269, Percent_Identity=42.7509293680297, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=37.2093023255814, Blast_Score=177, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136816, Length=295, Percent_Identity=42.3728813559322, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI17136818, Length=295, Percent_Identity=42.3728813559322, Blast_Score=221, Evalue=3e-58, Organism=Drosophila melanogaster, GI62472483, Length=283, Percent_Identity=39.9293286219081, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI45551871, Length=283, Percent_Identity=39.9293286219081, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI24645718, Length=283, Percent_Identity=39.9293286219081, Blast_Score=184, Evalue=6e-47, Organism=Drosophila melanogaster, GI17137370, Length=283, Percent_Identity=39.9293286219081, Blast_Score=184, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_MYCA9 (B1MG21)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001704420.1 - ProteinModelPortal: B1MG21 - SMR: B1MG21 - EnsemblBacteria: EBMYCT00000006561 - GeneID: 5966190 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_3692c - GeneTree: EBGT00050000016741 - HOGENOM: HBG328751 - OMA: CTPLGCI - BioCyc: MABS561007:MAB_3692C-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 29721; Mature: 29590
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATRLDGKATRDEIFVELATRAAALKAAGKTPGLGTILVGDDPGSHAYVRGKHADCAKV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCHHHH GLNSIRRDLPADIDQATLCATIDELNANPDCTGYIVQLPLPKHLDENEALERIDPDKDAD HHHHHHHHCCCCCCCHHHHEEHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCC GLHPTNLGRLVLGKEAPLPCTPRGIVYLLRRYDVKLDGAHVVVIGRGVTVGRPLGLLLTR CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCEEECCEEEEEEECCCCCCCCCEEEEEE RSENATVTLCHTGTRDLAALTRQADIIVAAAGVPHMVTADMVKPGAAVVDVGVSRVDDKL CCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCEEHHHCCCCCEEEECCHHHHCHHH TGDVAEDVWDVAGYVSPNPGGVGPLTRAFLLTNVIERAERS CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TATRLDGKATRDEIFVELATRAAALKAAGKTPGLGTILVGDDPGSHAYVRGKHADCAKV CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCHHHH GLNSIRRDLPADIDQATLCATIDELNANPDCTGYIVQLPLPKHLDENEALERIDPDKDAD HHHHHHHHCCCCCCCHHHHEEHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCC GLHPTNLGRLVLGKEAPLPCTPRGIVYLLRRYDVKLDGAHVVVIGRGVTVGRPLGLLLTR CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCEEECCEEEEEEECCCCCCCCCEEEEEE RSENATVTLCHTGTRDLAALTRQADIIVAAAGVPHMVTADMVKPGAAVVDVGVSRVDDKL CCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCEEHHHCCCCCEEEECCHHHHCHHH TGDVAEDVWDVAGYVSPNPGGVGPLTRAFLLTNVIERAERS CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA