| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630748
Identifier: 169630748
GI number: 169630748
Start: 3721654
End: 3722982
Strand: Direct
Name: 169630748
Synonym: MAB_3669
Alternate gene names: NA
Gene position: 3721654-3722982 (Clockwise)
Preceding gene: 169630747
Following gene: 169630752
Centisome position: 73.45
GC content: 64.56
Gene sequence:
>1329_bases ATGGCTGCTGACATCGTTCCCATCGAACTCGGGCTCACCGAAGGTGACGTAGTCACCCTGTGGGCCCCGCGGTGGCGCGA CGCCGGAGACGAGTGGGAAGCGTTTCTGGGCAAGGACGACGATCTATACGTGTTCGAGTCGGTCGCCGATCTGGTGGCCT TCGTCCGGACCGACAACGACAACGACCTGGTCGATCACCCGGCGTGGTCCACACTGGCATCGCTGTCTGCCGACGAGCTG GAGCCGGACGACGACAACCGCTACGACCTGATCGGTGTACCCGAGCTGGTTGCCGACAAGCCCACCGAGGACGCTGTCGA CACCTTGCGCGCCACGCTGGCGATCGTCGCGTCCATTGGCGCGGTCTGCGAGCTGGCCCCCATCAACAAGCTCATCAACG GCAACCCGGTGCTGGGCACGCTGTCGGGCGGGGCCGAAAGCTTCACGGGTAAAGACGGATTGAAGCGGTGGAACCAGATC GGCACCATCGTCGGCAAGTCATGGGACTCCGTGATCGACGCCATCGACGAGATCGCCGCAACACCCGATGTCGACGAGGA ACTCTCCGCTGCCGCGGACGCCGAGCTGCTTGCTGCCGCCGAGAATGCCGTCGATAAGGACGACGACCTCGAGGACGACG ACGAGCTGGACCTTCTTGACGAGGATTCGGACTCGGACGACGAGAGTTCGGACGACGCCGAGGACGAGTCCGACGATGCG GCCGAAGACGACGACACCGAGGACGAAGACACCGCGGATGACGACGTCGTCCTCGGCGGCGACGAGGACTTCTGGCTGGA GGTCGGTATCGACCCGATCCAGATGATCACCAACTCGGGGACCTTCTACACGCTGCGCTGCTACCTGAACGACGAGCCGA TCTTCTTGGGACGCAACGGAAGAATCAGTGTGTTCGGCTCCGAGCGGGCGCTGGCCCGGTACCTCGCCGACGAACACGAC CACGATCTGGCCGATCTGAGCACCTATGACGACATCCGCACCGCCGCCACCGACGGATCACTGCGGATCGATATCACCGA CGACAACATCTATGTGTTCACCGGCCTCGCCGACGACCTGGAAGACGGCGTTGACGAGGTGGACCGGGACCAGCTGGAGC TGGCCGTGGAGCTGCTGACCGACGTCGCCGAATACTCCGAGGATGACAGCGTCGACGCGGAGTTGGACAGCGACACCCCG CTGGGCAAGCTGGTCGGGCATCTGCTCGAGCCCGAAAAGCACGACGAACCGAAGGGCCCGTTCGTCGACGCCGCCGAACG TTGGCGCACCCTGGAGCGGGCGATGGAGGCGCGGCTGCGGCGCGAATAG
Upstream 100 bases:
>100_bases CATAGTTCACCGGCGCCCGAGCGACTCTTGTTGCCTCGGTCACGCCGATTCTGGCGGTGGGTCTTTCCCTCGGGCCGCGC CTTCTGGCTAGGCTTGCCGC
Downstream 100 bases:
>100_bases TGCGCCGCTAGCCGATCAGGACCGCGTACCCGGGCTTGATCACGTCATCGATGATGGCCAACCGCTCATCGAACGGGATG AAGGCGGACTTCATCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MAADIVPIELGLTEGDVVTLWAPRWRDAGDEWEAFLGKDDDLYVFESVADLVAFVRTDNDNDLVDHPAWSTLASLSADEL EPDDDNRYDLIGVPELVADKPTEDAVDTLRATLAIVASIGAVCELAPINKLINGNPVLGTLSGGAESFTGKDGLKRWNQI GTIVGKSWDSVIDAIDEIAATPDVDEELSAAADAELLAAAENAVDKDDDLEDDDELDLLDEDSDSDDESSDDAEDESDDA AEDDDTEDEDTADDDVVLGGDEDFWLEVGIDPIQMITNSGTFYTLRCYLNDEPIFLGRNGRISVFGSERALARYLADEHD HDLADLSTYDDIRTAATDGSLRIDITDDNIYVFTGLADDLEDGVDEVDRDQLELAVELLTDVAEYSEDDSVDAELDSDTP LGKLVGHLLEPEKHDEPKGPFVDAAERWRTLERAMEARLRRE
Sequences:
>Translated_442_residues MAADIVPIELGLTEGDVVTLWAPRWRDAGDEWEAFLGKDDDLYVFESVADLVAFVRTDNDNDLVDHPAWSTLASLSADEL EPDDDNRYDLIGVPELVADKPTEDAVDTLRATLAIVASIGAVCELAPINKLINGNPVLGTLSGGAESFTGKDGLKRWNQI GTIVGKSWDSVIDAIDEIAATPDVDEELSAAADAELLAAAENAVDKDDDLEDDDELDLLDEDSDSDDESSDDAEDESDDA AEDDDTEDEDTADDDVVLGGDEDFWLEVGIDPIQMITNSGTFYTLRCYLNDEPIFLGRNGRISVFGSERALARYLADEHD HDLADLSTYDDIRTAATDGSLRIDITDDNIYVFTGLADDLEDGVDEVDRDQLELAVELLTDVAEYSEDDSVDAELDSDTP LGKLVGHLLEPEKHDEPKGPFVDAAERWRTLERAMEARLRRE >Mature_441_residues AADIVPIELGLTEGDVVTLWAPRWRDAGDEWEAFLGKDDDLYVFESVADLVAFVRTDNDNDLVDHPAWSTLASLSADELE PDDDNRYDLIGVPELVADKPTEDAVDTLRATLAIVASIGAVCELAPINKLINGNPVLGTLSGGAESFTGKDGLKRWNQIG TIVGKSWDSVIDAIDEIAATPDVDEELSAAADAELLAAAENAVDKDDDLEDDDELDLLDEDSDSDDESSDDAEDESDDAA EDDDTEDEDTADDDVVLGGDEDFWLEVGIDPIQMITNSGTFYTLRCYLNDEPIFLGRNGRISVFGSERALARYLADEHDH DLADLSTYDDIRTAATDGSLRIDITDDNIYVFTGLADDLEDGVDEVDRDQLELAVELLTDVAEYSEDDSVDAELDSDTPL GKLVGHLLEPEKHDEPKGPFVDAAERWRTLERAMEARLRRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48395; Mature: 48264
Theoretical pI: Translated: 3.56; Mature: 3.56
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADIVPIELGLTEGDVVTLWAPRWRDAGDEWEAFLGKDDDLYVFESVADLVAFVRTDND CCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC NDLVDHPAWSTLASLSADELEPDDDNRYDLIGVPELVADKPTEDAVDTLRATLAIVASIG CCCCCCCCHHHHHHCCHHCCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHH AVCELAPINKLINGNPVLGTLSGGAESFTGKDGLKRWNQIGTIVGKSWDSVIDAIDEIAA HHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC TPDVDEELSAAADAELLAAAENAVDKDDDLEDDDELDLLDEDSDSDDESSDDAEDESDDA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEDDDTEDEDTADDDVVLGGDEDFWLEVGIDPIQMITNSGTFYTLRCYLNDEPIFLGRNG CCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEECCC RISVFGSERALARYLADEHDHDLADLSTYDDIRTAATDGSLRIDITDDNIYVFTGLADDL EEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHH EDGVDEVDRDQLELAVELLTDVAEYSEDDSVDAELDSDTPLGKLVGHLLEPEKHDEPKGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC FVDAAERWRTLERAMEARLRRE CCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AADIVPIELGLTEGDVVTLWAPRWRDAGDEWEAFLGKDDDLYVFESVADLVAFVRTDND CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC NDLVDHPAWSTLASLSADELEPDDDNRYDLIGVPELVADKPTEDAVDTLRATLAIVASIG CCCCCCCCHHHHHHCCHHCCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHH AVCELAPINKLINGNPVLGTLSGGAESFTGKDGLKRWNQIGTIVGKSWDSVIDAIDEIAA HHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC TPDVDEELSAAADAELLAAAENAVDKDDDLEDDDELDLLDEDSDSDDESSDDAEDESDDA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEDDDTEDEDTADDDVVLGGDEDFWLEVGIDPIQMITNSGTFYTLRCYLNDEPIFLGRNG CCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEECCC RISVFGSERALARYLADEHDHDLADLSTYDDIRTAATDGSLRIDITDDNIYVFTGLADDL EEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHH EDGVDEVDRDQLELAVELLTDVAEYSEDDSVDAELDSDTPLGKLVGHLLEPEKHDEPKGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC FVDAAERWRTLERAMEARLRRE CCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA