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The map label for this gene is yddH [H]

Identifier: 169630743

GI number: 169630743

Start: 3717060

End: 3718412

Strand: Direct

Name: yddH [H]

Synonym: MAB_3664

Alternate gene names: 169630743

Gene position: 3717060-3718412 (Clockwise)

Preceding gene: 169630742

Following gene: 169630744

Centisome position: 73.36

GC content: 68.74

Gene sequence:

>1353_bases
ATGGTTGAGACAAGTCCAATCTCGCCCAGCCGCTTGTCCGAGGCTGTCAACACCAACTACCCGGATTTCTCCAACAATCC
CTTCTCTTCCGGCTTGATCGGGCCAGCCATGGACATGGCGGGCACCGTCGGTCCCGGCCAGTTCAAGGAGGGCCAGGACC
CCAGCAAGATGCTGGAAAGTGGCATGCAGGTCATGCAACAGGTCATGCAGCAGGGCCTGCAGGCGGGTAGCTCACTCATC
GGCTCCTTCGCCGGTGCCGCCGCTCAGGCCCTGGGACAGTTCGCCGGCATGGCGGGCCAGGCACTCAGCAGCATGGCCAC
CCGCAGCGGCGCCATGGGCGCCAACGTGGGGCAGGCATCCGAGTCGACGGCTCGTGCTACCAGCCTGATCACCGAGGCTC
TCCAGGAGTTCCAGCACACCTCGGAGGCATTGACGCCGTTGCTCTGGGTTCCGGGTGTTGCCGCGGAGCTCGCGGAGGCG
GCCAGCCGATGCACGGCGCGCGTTGCCGAGCACACCGCGCAGCTCGAGGGTGAGCTCGCCGGACAAGCCGGCGAACTCAC
CGGCATGGCGGGCGCCGACATGGGCAACCCCGCCACCCCTGCTTCGGGGAGCGTCCAGCCCGCCATGTCGGCCATGCAGG
GCGGACTTCAGGCCGGAACACAGGCCATGTCCGGTGTCGCAAGCGGCGTCACCCAGACCATGAGCTCGATGGGCCAGGGC
CTCGGCCAGATTCCGCAGGCTCTCACCGGTCTGCTCAGCGGTGCCGGTGGCGGTAGCGGTTCCGCCAGCGCGCTGGCGGG
CGGCTCGGGACTGAACGGCATTGCCGCGGGCGCCCTGGCCAACCCGTTCGGAGCGGGCGGCGGCCACGCCTCCAGCACCG
CCGGTGGTACCTCCAGCGGGTTGGGCAGCGCCAACGCCAGCGCGGCCAAGATGCTGCTCGACCCGCGCAGCATGGGCAAG
GGCGTGCAGCTGTTCCTCCCGGACGGCAGCACCAGCCAGGCTCCGAATGCCGCCGCCGCCGAAGCCGTGCGCAAAGCGCT
CAGCCAGGTGGGTGTGCCCTATGAGTGGGGCGGCACCAAGCCCGGCGTCGGCCTGGACTGCAGCGGCCTGACCCAGTGGG
CCTACGGGCAGTCCGGCGTCGATATCCCTCGCCTTGCCCAGGAGCAGGGCGTGGGCGTCAAGGTCGATCAGGGATCGGTG
ATGCCGGGTGACCTCGCGGTGTGGGATGGCCACGTCGCCATGGTGATCGGCAACGGCATGATGGTCGAGGCCGGTGATCC
GGTCCAGATCTCCCCGATCCGAACCACCAACGCCGGACAGGGATTCCATGGATTCTACCGACCCACTTCCTAG

Upstream 100 bases:

>100_bases
CCGGCGTGACCACCAACGTGGCGAGCAACGGCTATGACGACGCCGACGACAACATCGGTAAGAACATCAGTGCCACCGTC
GAGGGAATCGAGGCCTGACC

Downstream 100 bases:

>100_bases
TTCGGGAGTGCCGCGGCCCGAGCCGCGTGCGAGCATCGATATGACAAATCGTGCTCGCACGCTGCGGGTCAAGGTCTCCG
AATTCGGCCTGCCGCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MVETSPISPSRLSEAVNTNYPDFSNNPFSSGLIGPAMDMAGTVGPGQFKEGQDPSKMLESGMQVMQQVMQQGLQAGSSLI
GSFAGAAAQALGQFAGMAGQALSSMATRSGAMGANVGQASESTARATSLITEALQEFQHTSEALTPLLWVPGVAAELAEA
ASRCTARVAEHTAQLEGELAGQAGELTGMAGADMGNPATPASGSVQPAMSAMQGGLQAGTQAMSGVASGVTQTMSSMGQG
LGQIPQALTGLLSGAGGGSGSASALAGGSGLNGIAAGALANPFGAGGGHASSTAGGTSSGLGSANASAAKMLLDPRSMGK
GVQLFLPDGSTSQAPNAAAAEAVRKALSQVGVPYEWGGTKPGVGLDCSGLTQWAYGQSGVDIPRLAQEQGVGVKVDQGSV
MPGDLAVWDGHVAMVIGNGMMVEAGDPVQISPIRTTNAGQGFHGFYRPTS

Sequences:

>Translated_450_residues
MVETSPISPSRLSEAVNTNYPDFSNNPFSSGLIGPAMDMAGTVGPGQFKEGQDPSKMLESGMQVMQQVMQQGLQAGSSLI
GSFAGAAAQALGQFAGMAGQALSSMATRSGAMGANVGQASESTARATSLITEALQEFQHTSEALTPLLWVPGVAAELAEA
ASRCTARVAEHTAQLEGELAGQAGELTGMAGADMGNPATPASGSVQPAMSAMQGGLQAGTQAMSGVASGVTQTMSSMGQG
LGQIPQALTGLLSGAGGGSGSASALAGGSGLNGIAAGALANPFGAGGGHASSTAGGTSSGLGSANASAAKMLLDPRSMGK
GVQLFLPDGSTSQAPNAAAAEAVRKALSQVGVPYEWGGTKPGVGLDCSGLTQWAYGQSGVDIPRLAQEQGVGVKVDQGSV
MPGDLAVWDGHVAMVIGNGMMVEAGDPVQISPIRTTNAGQGFHGFYRPTS
>Mature_450_residues
MVETSPISPSRLSEAVNTNYPDFSNNPFSSGLIGPAMDMAGTVGPGQFKEGQDPSKMLESGMQVMQQVMQQGLQAGSSLI
GSFAGAAAQALGQFAGMAGQALSSMATRSGAMGANVGQASESTARATSLITEALQEFQHTSEALTPLLWVPGVAAELAEA
ASRCTARVAEHTAQLEGELAGQAGELTGMAGADMGNPATPASGSVQPAMSAMQGGLQAGTQAMSGVASGVTQTMSSMGQG
LGQIPQALTGLLSGAGGGSGSASALAGGSGLNGIAAGALANPFGAGGGHASSTAGGTSSGLGSANASAAKMLLDPRSMGK
GVQLFLPDGSTSQAPNAAAAEAVRKALSQVGVPYEWGGTKPGVGLDCSGLTQWAYGQSGVDIPRLAQEQGVGVKVDQGSV
MPGDLAVWDGHVAMVIGNGMMVEAGDPVQISPIRTTNAGQGFHGFYRPTS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 44349; Mature: 44349

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCCCEEEECEEECCCCCCCCCCCCCCC
>Mature Secondary Structure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EEECCCCEEEECEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]