| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is pgm [C]
Identifier: 169630740
GI number: 169630740
Start: 3714184
End: 3715797
Strand: Direct
Name: pgm [C]
Synonym: MAB_3661
Alternate gene names: 169630740
Gene position: 3714184-3715797 (Clockwise)
Preceding gene: 169630739
Following gene: 169630742
Centisome position: 73.3
GC content: 65.68
Gene sequence:
>1614_bases ATGACTGTGGCAGCAGAAACGATCCAGGAGTGGATCGACCACGACCCGGATCCCCAGACCGTCGCCGAGCTGCGCGCGTG CTCCGAAGACGAGCTTGCCCAGCGTTTCTCGGATCCACTGGTGTTCGGCACGGCGGGCCTGCGCGGCCCCGTGCGCGGCG GCCCGAATGGAATGAACCTGGCGGTGGTGTTGCGCACCACCTATGGGCTGGCCAAGGTCCTCAAGGATCGATGCCTGGGC GGCTCCACCGTGGTGGTGGGCCGCGACGCCCGCCACGGATCCGAGAAGTTTGCGCTAGGCGCGGCCGAAGTCCTTGCTGC CGAAGGATTCACGGTGGTGTTGTTACCCCGTCCGCTGCCGACGCCGGTGCTGGCCTTCGCGGTGCGGCAGGTGGATGCGG CGGCAGGCATCCAAATCACCGCATCCCATAATCCGCCCGCGGACAACGGCTACAAGGTGTACTGGTCGGGCGGAGCCCAG ATCATCTCCCCCACCGATCGTGAAATCGAAGCGGCAACGGCGGCAGCGCCTTTCGCCGATCAAATTCCCCGCACCCCGGT CGAGCCCACCGGCGAGTCCTTGATCGATGCCTATGTTCAGCGCGCCGCGACGGTGCGCCGCGGCGCGGGCAACTTGCGTG TCGTCCTCACCGCACTTCACGGGGTCGGTGGCGCCACCGCCGTGGCCACCCTGAACGCCGCGGGCATCACCGACATCCAC CTGGTGGACGAGCAGTTCCAGCCGAATCCGGACTTTCCCACTGTCGAGTTTCCGAATCCGGAAGAACGAGGCGCCTCCGA CGCGGTGCTGGCCCGGGCCGCCGAGGTGGACGCGGCCCTGGCGATCGCCCTCGATCCCGACGCCGATCGATGCGCCATCG GAGTCCCCACCACCACGGGTTGGCGCATGTTGTCTGGAGATGAAACCGGTTGGCTGCTGGGCGATTACATTCTTTCCACA CAACCGGATTCCTCGATTCCTCCGGTGGTTGCCAGCACGGTGGTCTCCTCACGCATGCTGGCGCGCATCGCGGCATCCCT CGGCGCCCGCCATGTGGAAACCCTTACGGGGTTCAAATGGCTGGTACGCGCGGCAGATTCCGATCTCGTCTATGCCTATG AGGAAGCCATCGGTCATTGCGTGGATCCGGTGGCGGTCCGCGACAAGGACGGCATCTCGGCGGCGGTGCTCGCCTGCGAC CTGGTCACCCATCTACGCGAGCTCGGCACCAGTGTGGAGGAAAAACTCGAGAACCTTGCGATCCGGCATGGCATCCACGT GACCTCTCAGGTGTCACGGCGCATGGACTCACTCGAGGACATCGAAGCGATGATGACCCGACTGCGCCAGAACATCCCCG CTGCCTTGTCCGGATTTCCCATCACCGCGGAAGATCTTCTGGAGCGACGCGGCCAGCAGCGCACCGACGCGGTGGTCCTC TCGGGCGAGATCGGCGGGTCGTCCATCCGTCTGGTACTCCGGCCGTCGGGAACCGAACCAAAAGTCAAGTGCTACATCGA GGTCCGCGAACCCGTGATCACCGACCCCACCGTGGCGCGGATCTGGGCCGGGGTGGTGGTCTCCGAGCTGGAGGCTTACG CCCGGAACATCTGA
Upstream 100 bases:
>100_bases GAATGACCGGCGAATCCCTGAATCATGAGGAGGTGCTGGCGGCGGGCCGAGCGTCGGCCACCCGCATGGGCCAACTTCTA CGCGCGGTGATTGGTCGGCT
Downstream 100 bases:
>100_bases CGCGGCCCGAGCTATCGGGGCCCGAACTGGCGATCACCGGCATCGCCCAACCCGGGCACGATGTAGGCGGCGTCGTTGAG ACCCTCGTCGATCGTGGCAG
Product: phosphomannomutase PmmB
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTVAAETIQEWIDHDPDPQTVAELRACSEDELAQRFSDPLVFGTAGLRGPVRGGPNGMNLAVVLRTTYGLAKVLKDRCLG GSTVVVGRDARHGSEKFALGAAEVLAAEGFTVVLLPRPLPTPVLAFAVRQVDAAAGIQITASHNPPADNGYKVYWSGGAQ IISPTDREIEAATAAAPFADQIPRTPVEPTGESLIDAYVQRAATVRRGAGNLRVVLTALHGVGGATAVATLNAAGITDIH LVDEQFQPNPDFPTVEFPNPEERGASDAVLARAAEVDAALAIALDPDADRCAIGVPTTTGWRMLSGDETGWLLGDYILST QPDSSIPPVVASTVVSSRMLARIAASLGARHVETLTGFKWLVRAADSDLVYAYEEAIGHCVDPVAVRDKDGISAAVLACD LVTHLRELGTSVEEKLENLAIRHGIHVTSQVSRRMDSLEDIEAMMTRLRQNIPAALSGFPITAEDLLERRGQQRTDAVVL SGEIGGSSIRLVLRPSGTEPKVKCYIEVREPVITDPTVARIWAGVVVSELEAYARNI
Sequences:
>Translated_537_residues MTVAAETIQEWIDHDPDPQTVAELRACSEDELAQRFSDPLVFGTAGLRGPVRGGPNGMNLAVVLRTTYGLAKVLKDRCLG GSTVVVGRDARHGSEKFALGAAEVLAAEGFTVVLLPRPLPTPVLAFAVRQVDAAAGIQITASHNPPADNGYKVYWSGGAQ IISPTDREIEAATAAAPFADQIPRTPVEPTGESLIDAYVQRAATVRRGAGNLRVVLTALHGVGGATAVATLNAAGITDIH LVDEQFQPNPDFPTVEFPNPEERGASDAVLARAAEVDAALAIALDPDADRCAIGVPTTTGWRMLSGDETGWLLGDYILST QPDSSIPPVVASTVVSSRMLARIAASLGARHVETLTGFKWLVRAADSDLVYAYEEAIGHCVDPVAVRDKDGISAAVLACD LVTHLRELGTSVEEKLENLAIRHGIHVTSQVSRRMDSLEDIEAMMTRLRQNIPAALSGFPITAEDLLERRGQQRTDAVVL SGEIGGSSIRLVLRPSGTEPKVKCYIEVREPVITDPTVARIWAGVVVSELEAYARNI >Mature_536_residues TVAAETIQEWIDHDPDPQTVAELRACSEDELAQRFSDPLVFGTAGLRGPVRGGPNGMNLAVVLRTTYGLAKVLKDRCLGG STVVVGRDARHGSEKFALGAAEVLAAEGFTVVLLPRPLPTPVLAFAVRQVDAAAGIQITASHNPPADNGYKVYWSGGAQI ISPTDREIEAATAAAPFADQIPRTPVEPTGESLIDAYVQRAATVRRGAGNLRVVLTALHGVGGATAVATLNAAGITDIHL VDEQFQPNPDFPTVEFPNPEERGASDAVLARAAEVDAALAIALDPDADRCAIGVPTTTGWRMLSGDETGWLLGDYILSTQ PDSSIPPVVASTVVSSRMLARIAASLGARHVETLTGFKWLVRAADSDLVYAYEEAIGHCVDPVAVRDKDGISAAVLACDL VTHLRELGTSVEEKLENLAIRHGIHVTSQVSRRMDSLEDIEAMMTRLRQNIPAALSGFPITAEDLLERRGQQRTDAVVLS GEIGGSSIRLVLRPSGTEPKVKCYIEVREPVITDPTVARIWAGVVVSELEAYARNI
Specific function: This Enzyme Participates In Both The Breakdown And Synthesis Of Glucose. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=580, Percent_Identity=32.9310344827586, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI31377548, Length=560, Percent_Identity=31.0714285714286, Blast_Score=223, Evalue=4e-58, Organism=Escherichia coli, GI1786904, Length=505, Percent_Identity=26.9306930693069, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788361, Length=442, Percent_Identity=23.7556561085973, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71993870, Length=576, Percent_Identity=30.7291666666667, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI71993878, Length=308, Percent_Identity=33.7662337662338, Blast_Score=160, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6323934, Length=574, Percent_Identity=30.6620209059233, Blast_Score=231, Evalue=2e-61, Organism=Drosophila melanogaster, GI20129809, Length=562, Percent_Identity=32.2064056939502, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI24651977, Length=482, Percent_Identity=34.2323651452282, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24653722, Length=482, Percent_Identity=29.8755186721992, Blast_Score=196, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 57094; Mature: 56963
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAAETIQEWIDHDPDPQTVAELRACSEDELAQRFSDPLVFGTAGLRGPVRGGPNGMNL CCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEE AVVLRTTYGLAKVLKDRCLGGSTVVVGRDARHGSEKFALGAAEVLAAEGFTVVLLPRPLP EEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC TPVLAFAVRQVDAAAGIQITASHNPPADNGYKVYWSGGAQIISPTDREIEAATAAAPFAD HHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHCCCCHH QIPRTPVEPTGESLIDAYVQRAATVRRGAGNLRVVLTALHGVGGATAVATLNAAGITDIH HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCHHHHEEECCCCCEEEE LVDEQFQPNPDFPTVEFPNPEERGASDAVLARAAEVDAALAIALDPDADRCAIGVPTTTG EECCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCEEEEEEECCCCCCEEECCCCCCC WRMLSGDETGWLLGDYILSTQPDSSIPPVVASTVVSSRMLARIAASLGARHVETLTGFKW CEEECCCCCCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LVRAADSDLVYAYEEAIGHCVDPVAVRDKDGISAAVLACDLVTHLRELGTSVEEKLENLA HHHHCCCCEEHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH IRHGIHVTSQVSRRMDSLEDIEAMMTRLRQNIPAALSGFPITAEDLLERRGQQRTDAVVL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHCCCCCCCEEEE SGEIGGSSIRLVLRPSGTEPKVKCYIEVREPVITDPTVARIWAGVVVSELEAYARNI EECCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVAAETIQEWIDHDPDPQTVAELRACSEDELAQRFSDPLVFGTAGLRGPVRGGPNGMNL CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEE AVVLRTTYGLAKVLKDRCLGGSTVVVGRDARHGSEKFALGAAEVLAAEGFTVVLLPRPLP EEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC TPVLAFAVRQVDAAAGIQITASHNPPADNGYKVYWSGGAQIISPTDREIEAATAAAPFAD HHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHCCCCHH QIPRTPVEPTGESLIDAYVQRAATVRRGAGNLRVVLTALHGVGGATAVATLNAAGITDIH HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCHHHHEEECCCCCEEEE LVDEQFQPNPDFPTVEFPNPEERGASDAVLARAAEVDAALAIALDPDADRCAIGVPTTTG EECCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCEEEEEEECCCCCCEEECCCCCCC WRMLSGDETGWLLGDYILSTQPDSSIPPVVASTVVSSRMLARIAASLGARHVETLTGFKW CEEECCCCCCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LVRAADSDLVYAYEEAIGHCVDPVAVRDKDGISAAVLACDLVTHLRELGTSVEEKLENLA HHHHCCCCEEHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH IRHGIHVTSQVSRRMDSLEDIEAMMTRLRQNIPAALSGFPITAEDLLERRGQQRTDAVVL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHCCCCCCCEEEE SGEIGGSSIRLVLRPSGTEPKVKCYIEVREPVITDPTVARIWAGVVVSELEAYARNI EECCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]