| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is abgB [H]
Identifier: 169630738
GI number: 169630738
Start: 3712076
End: 3713281
Strand: Reverse
Name: abgB [H]
Synonym: MAB_3659c
Alternate gene names: 169630738
Gene position: 3713281-3712076 (Counterclockwise)
Preceding gene: 169630741
Following gene: 169630737
Centisome position: 73.28
GC content: 65.51
Gene sequence:
>1206_bases ATGCCCTTGACCACCGGAGCGTCGTCCACCGCGCACGCCGAGACCGCCAGCGCGGTCGTCGATGCCGCGGCGACGGATCT GGTTGCGCTATCACATGACATCCATTCCGAACCCGAACTGGCGTTTCAGGAGGTTCGCAGTGCCCTGAAGACCCAGCGGC TGCTCGCCGAGCGCGGTTTTGAGATCGTCACCGGTCAAGGCGGTATGGATACCGCCTTCCGGGCCACTTATGGCCATGGT CCACTGGTCATCGGAGTTTGCGCCGAGTATGACGCGCTACCCGGGATCGGCCACGCCTGCGGGCACAACATCATCGCGGC CTCTGCCGTGGGCACCGGTCTGGGGCTGGCCGAAGTCGCCGATGCCCTCGGACTCACCGTGGTGGTCATCGGTACACCGG CCGAGGAATTCGGCGGCGGTAAGGCGCTTCTACTCAAGGCGGGCGCCTTTGACGATGTCGCGGCTGCGGTGATGCTGCAT CCCGGGCCCATCGACATCGCCGGCGCCCGATCGCTTGCGCTGACCGATGTGATGGTGACCTACCACGGCAAGGAGTCACA CGCCGCGGTGGCGCCTCAACTCGGCATCAACGCCGCCGATGCGGTCACCGTCGCTCAGGTCTCGATCGGTCTGTTGCGTC AGCACCTCTCACCCGGACAGCTGATCCACGGCATCGTCACCGAGGGCGGCGAGGCGGCCAACATCATTCCGGGCCGAGCC GCGATGCAGTACACGATGCGTGCCGTCGAAACTGCTTCCCTGCGCGAGCTGGAGGAAAAGGTCTATGCCTGCTTCGCGGC GGGCGCCATGGCGACCGGTTGCAGTCATGAACTCGTCGAATCCTCGCCCCCGTATCTGGAGCTGACACCGGATCCGTGGC TGGTGGCGGTGTTCCGCGAGGAGATGGAATCCTTCGGCCGTACGCCGGTGCCGGCCGAGTTCGAGGCCACGGTGCCGCTG GGCAGCACCGATATGGGCAACGTCACGCAGGTGTTGCCCGGCATTCACCCGGTTATCGGCATCGATTCGGGTGGGGCGGT TATTCATCAGCCCGATTTCGAAAAGGCAGCCAGGGAGCCGGGTGCCGACCGGGCTGTGGTCGAGGGAGCGAAGATGTTGG CGCGCACCGTGATACGGCTGGCCGAGGATGAATCCGAGCGGTCCAGGGTGCTGGATCGGCTGGCACGCAGGACGGTGAAG GTATGA
Upstream 100 bases:
>100_bases CGGCGTCGTCGACTCGTCGCGCGGGCTGGGGGTACCTCCCGCGTGCGGGGGCCTCATCGGTCACAGCTACGGAGCCTAAC CATGATGGGATACTCATCTA
Downstream 100 bases:
>100_bases GCGAGTCCCTGTCAGCGGTAGCCGAGCAGTGGCTCGCCGAGAACACCGACGCGCTGGTCCGGTGGCGCCGGCACATCCAC GAACATCCTGAGTTGGCGCG
Product: putative peptidase/amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MPLTTGASSTAHAETASAVVDAAATDLVALSHDIHSEPELAFQEVRSALKTQRLLAERGFEIVTGQGGMDTAFRATYGHG PLVIGVCAEYDALPGIGHACGHNIIAASAVGTGLGLAEVADALGLTVVVIGTPAEEFGGGKALLLKAGAFDDVAAAVMLH PGPIDIAGARSLALTDVMVTYHGKESHAAVAPQLGINAADAVTVAQVSIGLLRQHLSPGQLIHGIVTEGGEAANIIPGRA AMQYTMRAVETASLRELEEKVYACFAAGAMATGCSHELVESSPPYLELTPDPWLVAVFREEMESFGRTPVPAEFEATVPL GSTDMGNVTQVLPGIHPVIGIDSGGAVIHQPDFEKAAREPGADRAVVEGAKMLARTVIRLAEDESERSRVLDRLARRTVK V
Sequences:
>Translated_401_residues MPLTTGASSTAHAETASAVVDAAATDLVALSHDIHSEPELAFQEVRSALKTQRLLAERGFEIVTGQGGMDTAFRATYGHG PLVIGVCAEYDALPGIGHACGHNIIAASAVGTGLGLAEVADALGLTVVVIGTPAEEFGGGKALLLKAGAFDDVAAAVMLH PGPIDIAGARSLALTDVMVTYHGKESHAAVAPQLGINAADAVTVAQVSIGLLRQHLSPGQLIHGIVTEGGEAANIIPGRA AMQYTMRAVETASLRELEEKVYACFAAGAMATGCSHELVESSPPYLELTPDPWLVAVFREEMESFGRTPVPAEFEATVPL GSTDMGNVTQVLPGIHPVIGIDSGGAVIHQPDFEKAAREPGADRAVVEGAKMLARTVIRLAEDESERSRVLDRLARRTVK V >Mature_400_residues PLTTGASSTAHAETASAVVDAAATDLVALSHDIHSEPELAFQEVRSALKTQRLLAERGFEIVTGQGGMDTAFRATYGHGP LVIGVCAEYDALPGIGHACGHNIIAASAVGTGLGLAEVADALGLTVVVIGTPAEEFGGGKALLLKAGAFDDVAAAVMLHP GPIDIAGARSLALTDVMVTYHGKESHAAVAPQLGINAADAVTVAQVSIGLLRQHLSPGQLIHGIVTEGGEAANIIPGRAA MQYTMRAVETASLRELEEKVYACFAAGAMATGCSHELVESSPPYLELTPDPWLVAVFREEMESFGRTPVPAEFEATVPLG STDMGNVTQVLPGIHPVIGIDSGGAVIHQPDFEKAAREPGADRAVVEGAKMLARTVIRLAEDESERSRVLDRLARRTVKV
Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI58082085, Length=382, Percent_Identity=36.3874345549738, Blast_Score=210, Evalue=2e-54, Organism=Escherichia coli, GI1787598, Length=263, Percent_Identity=30.0380228136882, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017145 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 41592; Mature: 41461
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTTGASSTAHAETASAVVDAAATDLVALSHDIHSEPELAFQEVRSALKTQRLLAERGF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC EIVTGQGGMDTAFRATYGHGPLVIGVCAEYDALPGIGHACGHNIIAASAVGTGLGLAEVA EEEECCCCCCCHHEEECCCCCEEEEEECCCCCCCCCCHHHCCCEEEHHHHCCCCCHHHHH DALGLTVVVIGTPAEEFGGGKALLLKAGAFDDVAAAVMLHPGPIDIAGARSLALTDVMVT HHCCEEEEEEECCHHHHCCCEEEEEECCCCHHHHHEEEECCCCCCCCCCCHHHHEEEEEE YHGKESHAAVAPQLGINAADAVTVAQVSIGLLRQHLSPGQLIHGIVTEGGEAANIIPGRA ECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHH AMQYTMRAVETASLRELEEKVYACFAAGAMATGCSHELVESSPPYLELTPDPWLVAVFRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCHHHHHHHH EMESFGRTPVPAEFEATVPLGSTDMGNVTQVLPGIHPVIGIDSGGAVIHQPDFEKAAREP HHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCEEEECCCCCEEECCCHHHHHCCC GADRAVVEGAKMLARTVIRLAEDESERSRVLDRLARRTVKV CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLTTGASSTAHAETASAVVDAAATDLVALSHDIHSEPELAFQEVRSALKTQRLLAERGF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC EIVTGQGGMDTAFRATYGHGPLVIGVCAEYDALPGIGHACGHNIIAASAVGTGLGLAEVA EEEECCCCCCCHHEEECCCCCEEEEEECCCCCCCCCCHHHCCCEEEHHHHCCCCCHHHHH DALGLTVVVIGTPAEEFGGGKALLLKAGAFDDVAAAVMLHPGPIDIAGARSLALTDVMVT HHCCEEEEEEECCHHHHCCCEEEEEECCCCHHHHHEEEECCCCCCCCCCCHHHHEEEEEE YHGKESHAAVAPQLGINAADAVTVAQVSIGLLRQHLSPGQLIHGIVTEGGEAANIIPGRA ECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHH AMQYTMRAVETASLRELEEKVYACFAAGAMATGCSHELVESSPPYLELTPDPWLVAVFRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCHHHHHHHH EMESFGRTPVPAEFEATVPLGSTDMGNVTQVLPGIHPVIGIDSGGAVIHQPDFEKAAREP HHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCEEEECCCCCEEECCCHHHHHCCC GADRAVVEGAKMLARTVIRLAEDESERSRVLDRLARRTVKV CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9829935 [H]