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The map label for this gene is glpD2 [H]

Identifier: 169630734

GI number: 169630734

Start: 3707000

End: 3708781

Strand: Reverse

Name: glpD2 [H]

Synonym: MAB_3655c

Alternate gene names: 169630734

Gene position: 3708781-3707000 (Counterclockwise)

Preceding gene: 169630735

Following gene: 169630733

Centisome position: 73.19

GC content: 64.48

Gene sequence:

>1782_bases
GTGAGTGACGCAACCAGCCCGTCGGGATCGAGTGGACCCACATATACGTTTCTTGGGCCCGAAGCTCGTTCACTGAATTG
GGAGCGCCTGGGATCCGAGCAGTTCGATGTGATCGTCATCGGCGGCGGTGTCGTGGGTGCCGGTTCGGCGCTGGACGCGG
CGACCCGTGGCCTCAAGGTCGCGCTGGTAGAGGCTCGCGACTTTGCGTCGGGAACCTCGAGCCGCTCGTCGAAGATGTTC
CACGGCGGGCTGCGCTACCTGGAGCAGCTCGAATTCGGATTGGTGCAGGAGGCGTTGCGCGAGCGGGAGCTGTCCCTCTC
GACGCTGGCACCGCACCTGGTCAAGCCGCTGCCGTTCCTGTTCCCGTTGACCAGCAGGTGGTGGGAGCGGCCGTACGTGG
CGGCGGGTATTTTCCTGTACGACCAGATGGGTGGTGCGAAATCTGTTCCTGCCCAAAAGCATCTGACCCGTGCGGGCGCG
CTGCGGCTGGCACCGGGGCTCAAGCGGAATTCACTCATCGGCGGGATCCGGTATTACGACACGGTGGTCGACGACGCCCG
TCACACCATGACCGTGGCACGTACGGCCGCCCACTATGGCGCGGTGGTGCGCGCCTCCACACAGGTGGTCTCGCTGCTGC
GTGAGGGTGACCGTGTCACCGGTGTGCTGGTCCGGGATACGGAGAGCGGCGCCGAAACCGAGGTTCGCGGGCATGTCGTC
ATCAATGCGACCGGAGTATGGACCGATGAGATCCAGGCGCTGTCCAAGACACGAGGGCGTTTCCGGGTCACGGCATCCAA
GGGCGTGCATATCGTGGTGCCGCGCGACAGAATCGTCAGCGAGGTCGCGATCATCCTGCGTACCGAGAAATCCGTGCTGT
TCGTGATTCCGTGGGGCAACCACTGGATCATCGGAACCACCGACACCGAGTGGAATCTGGACCTGGCACATCCCGCTGCC
ACCAAGGTGGACATCGACTACATCCTGGACCATGTGAACACCGTGCTGGCAACACCGTTGACGCACAACGATATCGACGG
GGTGTACGCAGGGCTGCGGCCACTGCTGGCGGGCGAGAACGACGACACGTCCAAGCTGTCTCGCGAGCACGCGGTCGCCG
TGGCGGCTCCTGGCCTGGTGGCCATCGCGGGCGGCAAGTACACCACGTATCGAGTGATGGCGTCCGATGCCGTAGACATG
GCAAGCGAATTCGTGCCGGCACGGGTGGCTCCCTCCATCACGGAGAAGGTGCCGCTGCTGGGTGCCGACGGATACTTCGC
GCTGATCAACCAGACCGAGCATGTGGGGGAGACCTACGGTCTGCATCCCTACCGCGTGCGGCATCTACTGGACCGGTACG
GTTCGTTGATCGGCGAGGTGCTTGCCTGTGCGGGCACGGACCACAGCCTGCTGCAACCGATTACCAAGGCGCCCATGTAT
TTGAAGGTTGAGGCGCGCTATGCGGTGGCGGCAGAGGGCGCTCTGCACCTGGAGGACATTCTGGCCAGGCGCATGCGTAT
CGCCATCGAATACCCGCATCGCGGCGTCGATTGTGCCCAGGAAGTCGCCGAGCTGGTGGCACCCGTGCTGGGGTGGTCGG
CAGAGGACATCGTGCGTGAGGTGGATACGTATCGGGCGCGGGTCGATGCCGAAGTGCGCTCACAGCGTCAGCCTGACGAC
GCCTCGGCGGACGCGCTGCGAGTAGCCGCGCCCGAAGCTCGGTCGTTCATCGTCGAGCCGGTGACCGAAACAGGTACCGT
GCTCTCGCCCGCCACCAAGTAG

Upstream 100 bases:

>100_bases
ACAGCGGCGTGCATCACTGACGGGAGCGCTACCGGGCCGGTAACGTGGCTGTCTGGAAGGAACTCCGGGGCCCCGATAGA
GGGCGTGGAAGGGAGTAGTC

Downstream 100 bases:

>100_bases
GTCGCGTGAGCCCCAGACGCAGGGCTCCTGAGCCACCGCTACCGGTGCGAGACGGTTTGGGGCCGGTGCGAATACGGCTT
CACGACGGCGGACGAGTGGT

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MSDATSPSGSSGPTYTFLGPEARSLNWERLGSEQFDVIVIGGGVVGAGSALDAATRGLKVALVEARDFASGTSSRSSKMF
HGGLRYLEQLEFGLVQEALRERELSLSTLAPHLVKPLPFLFPLTSRWWERPYVAAGIFLYDQMGGAKSVPAQKHLTRAGA
LRLAPGLKRNSLIGGIRYYDTVVDDARHTMTVARTAAHYGAVVRASTQVVSLLREGDRVTGVLVRDTESGAETEVRGHVV
INATGVWTDEIQALSKTRGRFRVTASKGVHIVVPRDRIVSEVAIILRTEKSVLFVIPWGNHWIIGTTDTEWNLDLAHPAA
TKVDIDYILDHVNTVLATPLTHNDIDGVYAGLRPLLAGENDDTSKLSREHAVAVAAPGLVAIAGGKYTTYRVMASDAVDM
ASEFVPARVAPSITEKVPLLGADGYFALINQTEHVGETYGLHPYRVRHLLDRYGSLIGEVLACAGTDHSLLQPITKAPMY
LKVEARYAVAAEGALHLEDILARRMRIAIEYPHRGVDCAQEVAELVAPVLGWSAEDIVREVDTYRARVDAEVRSQRQPDD
ASADALRVAAPEARSFIVEPVTETGTVLSPATK

Sequences:

>Translated_593_residues
MSDATSPSGSSGPTYTFLGPEARSLNWERLGSEQFDVIVIGGGVVGAGSALDAATRGLKVALVEARDFASGTSSRSSKMF
HGGLRYLEQLEFGLVQEALRERELSLSTLAPHLVKPLPFLFPLTSRWWERPYVAAGIFLYDQMGGAKSVPAQKHLTRAGA
LRLAPGLKRNSLIGGIRYYDTVVDDARHTMTVARTAAHYGAVVRASTQVVSLLREGDRVTGVLVRDTESGAETEVRGHVV
INATGVWTDEIQALSKTRGRFRVTASKGVHIVVPRDRIVSEVAIILRTEKSVLFVIPWGNHWIIGTTDTEWNLDLAHPAA
TKVDIDYILDHVNTVLATPLTHNDIDGVYAGLRPLLAGENDDTSKLSREHAVAVAAPGLVAIAGGKYTTYRVMASDAVDM
ASEFVPARVAPSITEKVPLLGADGYFALINQTEHVGETYGLHPYRVRHLLDRYGSLIGEVLACAGTDHSLLQPITKAPMY
LKVEARYAVAAEGALHLEDILARRMRIAIEYPHRGVDCAQEVAELVAPVLGWSAEDIVREVDTYRARVDAEVRSQRQPDD
ASADALRVAAPEARSFIVEPVTETGTVLSPATK
>Mature_592_residues
SDATSPSGSSGPTYTFLGPEARSLNWERLGSEQFDVIVIGGGVVGAGSALDAATRGLKVALVEARDFASGTSSRSSKMFH
GGLRYLEQLEFGLVQEALRERELSLSTLAPHLVKPLPFLFPLTSRWWERPYVAAGIFLYDQMGGAKSVPAQKHLTRAGAL
RLAPGLKRNSLIGGIRYYDTVVDDARHTMTVARTAAHYGAVVRASTQVVSLLREGDRVTGVLVRDTESGAETEVRGHVVI
NATGVWTDEIQALSKTRGRFRVTASKGVHIVVPRDRIVSEVAIILRTEKSVLFVIPWGNHWIIGTTDTEWNLDLAHPAAT
KVDIDYILDHVNTVLATPLTHNDIDGVYAGLRPLLAGENDDTSKLSREHAVAVAAPGLVAIAGGKYTTYRVMASDAVDMA
SEFVPARVAPSITEKVPLLGADGYFALINQTEHVGETYGLHPYRVRHLLDRYGSLIGEVLACAGTDHSLLQPITKAPMYL
KVEARYAVAAEGALHLEDILARRMRIAIEYPHRGVDCAQEVAELVAPVLGWSAEDIVREVDTYRARVDAEVRSQRQPDDA
SADALRVAAPEARSFIVEPVTETGTVLSPATK

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=543, Percent_Identity=35.1749539594843, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI285002231, Length=543, Percent_Identity=35.1749539594843, Blast_Score=300, Evalue=2e-81,
Organism=Escherichia coli, GI2367226, Length=478, Percent_Identity=32.8451882845188, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI1788574, Length=381, Percent_Identity=29.9212598425197, Blast_Score=115, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17509253, Length=561, Percent_Identity=34.9376114081996, Blast_Score=266, Evalue=3e-71,
Organism=Caenorhabditis elegans, GI115534726, Length=539, Percent_Identity=34.1372912801484, Blast_Score=254, Evalue=9e-68,
Organism=Saccharomyces cerevisiae, GI6322036, Length=577, Percent_Identity=31.369150779896, Blast_Score=222, Evalue=1e-58,
Organism=Drosophila melanogaster, GI161077125, Length=548, Percent_Identity=36.3138686131387, Blast_Score=281, Evalue=7e-76,
Organism=Drosophila melanogaster, GI24653942, Length=548, Percent_Identity=36.3138686131387, Blast_Score=281, Evalue=7e-76,
Organism=Drosophila melanogaster, GI24653944, Length=548, Percent_Identity=36.3138686131387, Blast_Score=281, Evalue=7e-76,
Organism=Drosophila melanogaster, GI20130025, Length=548, Percent_Identity=36.3138686131387, Blast_Score=281, Evalue=7e-76,
Organism=Drosophila melanogaster, GI24586295, Length=561, Percent_Identity=31.729055258467, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI19921278, Length=540, Percent_Identity=30, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI45550977, Length=388, Percent_Identity=26.8041237113402, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 64274; Mature: 64143

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDATSPSGSSGPTYTFLGPEARSLNWERLGSEQFDVIVIGGGVVGAGSALDAATRGLKV
CCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCEECCCCHHHHHHCCEEE
ALVEARDFASGTSSRSSKMFHGGLRYLEQLEFGLVQEALRERELSLSTLAPHLVKPLPFL
EEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
FPLTSRWWERPYVAAGIFLYDQMGGAKSVPAQKHLTRAGALRLAPGLKRNSLIGGIRYYD
HHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCHHHHH
TVVDDARHTMTVARTAAHYGAVVRASTQVVSLLREGDRVTGVLVRDTESGAETEVRGHVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEE
INATGVWTDEIQALSKTRGRFRVTASKGVHIVVPRDRIVSEVAIILRTEKSVLFVIPWGN
EEECCCCHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHHHHHHEEEECCCEEEEEECCC
HWIIGTTDTEWNLDLAHPAATKVDIDYILDHVNTVLATPLTHNDIDGVYAGLRPLLAGEN
EEEEECCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
DDTSKLSREHAVAVAAPGLVAIAGGKYTTYRVMASDAVDMASEFVPARVAPSITEKVPLL
CCHHHHHHHHEEEEECCCEEEEECCCEEEEEEEEHHHHHHHHHHCCCCCCCCHHHCCCEE
GADGYFALINQTEHVGETYGLHPYRVRHLLDRYGSLIGEVLACAGTDHSLLQPITKAPMY
CCCCEEEEECCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE
LKVEARYAVAAEGALHLEDILARRMRIAIEYPHRGVDCAQEVAELVAPVLGWSAEDIVRE
EEEEEEEEEECCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
VDTYRARVDAEVRSQRQPDDASADALRVAAPEARSFIVEPVTETGTVLSPATK
HHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCHHEEECCCCCCCCEECCCCC
>Mature Secondary Structure 
SDATSPSGSSGPTYTFLGPEARSLNWERLGSEQFDVIVIGGGVVGAGSALDAATRGLKV
CCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCEECCCCHHHHHHCCEEE
ALVEARDFASGTSSRSSKMFHGGLRYLEQLEFGLVQEALRERELSLSTLAPHLVKPLPFL
EEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
FPLTSRWWERPYVAAGIFLYDQMGGAKSVPAQKHLTRAGALRLAPGLKRNSLIGGIRYYD
HHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCHHHHH
TVVDDARHTMTVARTAAHYGAVVRASTQVVSLLREGDRVTGVLVRDTESGAETEVRGHVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEE
INATGVWTDEIQALSKTRGRFRVTASKGVHIVVPRDRIVSEVAIILRTEKSVLFVIPWGN
EEECCCCHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHHHHHHEEEECCCEEEEEECCC
HWIIGTTDTEWNLDLAHPAATKVDIDYILDHVNTVLATPLTHNDIDGVYAGLRPLLAGEN
EEEEECCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
DDTSKLSREHAVAVAAPGLVAIAGGKYTTYRVMASDAVDMASEFVPARVAPSITEKVPLL
CCHHHHHHHHEEEEECCCEEEEECCCEEEEEEEEHHHHHHHHHHCCCCCCCCHHHCCCEE
GADGYFALINQTEHVGETYGLHPYRVRHLLDRYGSLIGEVLACAGTDHSLLQPITKAPMY
CCCCEEEEECCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE
LKVEARYAVAAEGALHLEDILARRMRIAIEYPHRGVDCAQEVAELVAPVLGWSAEDIVRE
EEEEEEEEEECCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
VDTYRARVDAEVRSQRQPDDASADALRVAAPEARSFIVEPVTETGTVLSPATK
HHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCHHEEECCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]