| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630686
Identifier: 169630686
GI number: 169630686
Start: 3656648
End: 3657004
Strand: Reverse
Name: 169630686
Synonym: MAB_3606c
Alternate gene names: NA
Gene position: 3657004-3656648 (Counterclockwise)
Preceding gene: 169630690
Following gene: 169630684
Centisome position: 72.17
GC content: 62.46
Gene sequence:
>357_bases ATGCTGTTCGGGCGCAATGAATTCGGCGTACACGACGAGCTGAGTTCCGGCGTTGGCACGGGTGCGGCGGGCTTGTCGCC CGCACGTCCGCATCTGACGTTGGTGCAGAACGATTTTGACGCGCTTGCTGCCGTCGCTGACGATCAGTGGCAAGAAAAGG CGCTGTGCGCACAGACCGATCCCGAGGCGTTCTTCCCCGAAAAGGGCGGATCGACTCGTGAAGCCAAGCGAATCTGCCAG GGTTGCGAAGTCAAGGACGAGTGCCTTGAGTATGCGCTGGCCAACGACGAACGGTTCGGCATTTGGGGCGGGCTGTCCGA GCGTGAGCGCCGCCGCCTGAAGCGGGGCATCATCTGA
Upstream 100 bases:
>100_bases ATGGATTCGAATGGAATGGCCGGAAACGAATGATGTGGGCACGAAACCGGGCAATACGAGCTGTATTGGGATGCAAGAGG AACAGTGAGGAGGCGGGACG
Downstream 100 bases:
>100_bases TCTGATTCCCGTGTTCGGCAGGGCGGAGCTAGTCGCCCTCGTCGGTGATGGTCGGGTCGATCACCGACGGCTCCACCCCC AGGTGGGTGGCAACCTGCGC
Product: WhiB family transcriptional regulator
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor WhiB Family Protein; Transcriptional Regulatory; Regulatory Protein; WhiB Family Regulatory Protein; WhiB-Type Transcription Regulator; Sporulation Regulatory Protein; Transcription Factor WhiB Family; Whib-Like Transcriptional Regulator; WhiB Family Transcription Factor; Transcription Factor; Transcription Regulator; Regulatory Protein WhiB; Transcriptional Regulatory Protein; Transcriptional Regulator WhiB; WhiB Transcriptional Regulator; WhiB Family Transcription Regulator
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLFGRNEFGVHDELSSGVGTGAAGLSPARPHLTLVQNDFDALAAVADDQWQEKALCAQTDPEAFFPEKGGSTREAKRICQ GCEVKDECLEYALANDERFGIWGGLSERERRRLKRGII
Sequences:
>Translated_118_residues MLFGRNEFGVHDELSSGVGTGAAGLSPARPHLTLVQNDFDALAAVADDQWQEKALCAQTDPEAFFPEKGGSTREAKRICQ GCEVKDECLEYALANDERFGIWGGLSERERRRLKRGII >Mature_118_residues MLFGRNEFGVHDELSSGVGTGAAGLSPARPHLTLVQNDFDALAAVADDQWQEKALCAQTDPEAFFPEKGGSTREAKRICQ GCEVKDECLEYALANDERFGIWGGLSERERRRLKRGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12998; Mature: 12998
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGRNEFGVHDELSSGVGTGAAGLSPARPHLTLVQNDFDALAAVADDQWQEKALCAQTD CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCHHHHHHHHCCCCC PEAFFPEKGGSTREAKRICQGCEVKDECLEYALANDERFGIWGGLSERERRRLKRGII CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLFGRNEFGVHDELSSGVGTGAAGLSPARPHLTLVQNDFDALAAVADDQWQEKALCAQTD CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCHHHHHHHHCCCCC PEAFFPEKGGSTREAKRICQGCEVKDECLEYALANDERFGIWGGLSERERRRLKRGII CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA