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The map label for this gene is yngJ [H]

Identifier: 169630668

GI number: 169630668

Start: 3635676

End: 3637625

Strand: Direct

Name: yngJ [H]

Synonym: MAB_3588

Alternate gene names: 169630668

Gene position: 3635676-3637625 (Clockwise)

Preceding gene: 169630664

Following gene: 169630673

Centisome position: 71.75

GC content: 64.46

Gene sequence:

>1950_bases
ATGGAGACCCGGACAGCACCCGCCGATCCCGAAGTTCTCACCTCGAATCTGCGCGTCGCGCTCGACGGACGGTTCGGTCC
GATCCGCGACGCCGCACGCGAATACCTGAACCGCGCCGACCTGCTCCCCGACCCATCGCTGACCCTCGAGCAGGCCCGCG
CGCGGTCGCTTCGGATCATGCGCGAGCTGGTTCCACATGGCTTGCCACACGCCGGATTCCGCACGGAGCATGGTGGCACC
GGCGACGTCGGAGCTGCGATCGTCGGCATTGAGATGCTCGGCTACGCGGACCTGTCGCTGATGGTCAAGGCGGGCGTGCA
ATGGGGCCTGTTTGGTGGCGCGATCGAAAACCTGGGTACCGCAACCCATCACGAACAGTATGTGGTCCCGTTGATCAACC
TGGATGTGCTCGGCTGTTTCGGCATGACCGAGACCGGCCACGGCTCCAACGTCCAGGCCCTGCAGACCGTCGCCACCTAT
GACCGCACGACCGGGGACTTCGTCCTCAACTCCGAGGGCTCGTTGGCGCGTAAGGACTACATCGGCGGCGCCGCCGAGCA
CGCCACCGTATCAGCGGTTTTCGCCCAGCTCGTCACCGGCGGGCCCGGCGAAGAGGCAACCGGACGCGGAGTGCATTGTT
TCGTGGTGCCGATCCGGGACGCCGACGGCAACGATCTGCCCGGCATCACCACCAGCGATTGCGGGTACAAGGGCGGGCTA
GCCGGAGTGGACAACGGGCGCATCGTATTCGACAACGTGCGTGTCCCGCGCGCCAACCTGCTCAACCGGTATGCCGATGT
CGCCGAGGACGGCACCTACAGCTCGCCGATCGAGAACGAGAACAAACGGTTCTTCACCATGCTGGGCACTCTCATCCGGG
GTCGCGTCAGCGTCGCCGCCACCTCGGGTGCGGCCGCCCGCAAGGCGCTGACCATAGCCTCGCGGTATGCCCTGGTGCGC
AAGCAGTTTGACACACCGGATAGCGATGACGAGGTGATTATCGCCGACTATCTGGTGCACCAGCGCAAGCTGCTACCTCT
GATAGCCCGCTCGTACGCGCTGGCCTTCGCGCAGAACGAGCTCACCGAAGAACTCCACCAGGTGCAGACCGCCGACGAGG
TGGACGCGGACCGGCAACGCCAACTGGAAAGCGCCGCAGCGGGTTTGAAGGCGATGACCAGCTGGCACGCCCAGCACGCG
ATCACCGTGTGCCGCGAGGCGTGCGGTGGCGCCGGGTACCTCGACGCCAACCAGCTCACCATCCTGCGACGCGATATCGA
TGTGTTCACCACCTTCGAGGGCGACAACACGGTGCTCACCCAGCTGGTGGCCAAGGAGCTGCTATCGGCGTACGCAGAAG
ATGTACGCGGCCTCAATGCCGTTGGTTGGACTCGATTTATCGCGGGAATGGCCCGTGACGTGATCCTGGAACGGTCCGCG
GCACGGCAGGTCATCCAGACCATCCTGGACTCCTCCGACGAGGACGTCGAGGAATCTGACTTGAGTAACCGCGGCACCCA
GCTACGCCTGCTGCGCAATCGCGAAGATCACCTGCTGCGCACCGCGGCAACCCGGATGCAGCGCGCCCAATCCGACGACG
AGGATCCCTTCGAGGTCTTCAACTCCGCCCAGGACCATATTTTGAAGGTGGGTTCGGCGCACACCGAGCGGGTGGTGCTG
GAAGCATTCATCGAGGCCATCGACAGCTGCGACAGCAAGTCCGCGCAGGAACTACTGGAGAAGCTGTGCGATCTGTTTGT
CTACAGCGCGCTCGAAGCCGACCTGTCGTGGTTCCTCATGCACCGGCACGTCTCGACCGAACGTGCCAAGGCGATCCGGC
GCGGCGTCAACCAGCTGTGCGAAGAACTGCGCCCACACCTCGGAACCCTGGTGGACGCCTTCGGAATTCCCGAGGCACTG
CTCGCCACGGAGATGATCCCCGACAACTAA

Upstream 100 bases:

>100_bases
TATAGACCGCTGGTCGGTATGTTAGACCAGTGGTCGGTAAATGCAAGTGGTGTGCCGTAGAACCCCGGCCGGCCCGGATC
ATCTGGCTAGGCTCGTATCC

Downstream 100 bases:

>100_bases
CCCGTCAGTACCGGAATCGCCTGGGGCACCATGAGCGGACGCACTTCCACCCATCGCTCCTCCGGTGTCCCCAATCCCGT
CAGCTGCAGCACGCCGCGCG

Product: putative acyl-CoA oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
METRTAPADPEVLTSNLRVALDGRFGPIRDAAREYLNRADLLPDPSLTLEQARARSLRIMRELVPHGLPHAGFRTEHGGT
GDVGAAIVGIEMLGYADLSLMVKAGVQWGLFGGAIENLGTATHHEQYVVPLINLDVLGCFGMTETGHGSNVQALQTVATY
DRTTGDFVLNSEGSLARKDYIGGAAEHATVSAVFAQLVTGGPGEEATGRGVHCFVVPIRDADGNDLPGITTSDCGYKGGL
AGVDNGRIVFDNVRVPRANLLNRYADVAEDGTYSSPIENENKRFFTMLGTLIRGRVSVAATSGAAARKALTIASRYALVR
KQFDTPDSDDEVIIADYLVHQRKLLPLIARSYALAFAQNELTEELHQVQTADEVDADRQRQLESAAAGLKAMTSWHAQHA
ITVCREACGGAGYLDANQLTILRRDIDVFTTFEGDNTVLTQLVAKELLSAYAEDVRGLNAVGWTRFIAGMARDVILERSA
ARQVIQTILDSSDEDVEESDLSNRGTQLRLLRNREDHLLRTAATRMQRAQSDDEDPFEVFNSAQDHILKVGSAHTERVVL
EAFIEAIDSCDSKSAQELLEKLCDLFVYSALEADLSWFLMHRHVSTERAKAIRRGVNQLCEELRPHLGTLVDAFGIPEAL
LATEMIPDN

Sequences:

>Translated_649_residues
METRTAPADPEVLTSNLRVALDGRFGPIRDAAREYLNRADLLPDPSLTLEQARARSLRIMRELVPHGLPHAGFRTEHGGT
GDVGAAIVGIEMLGYADLSLMVKAGVQWGLFGGAIENLGTATHHEQYVVPLINLDVLGCFGMTETGHGSNVQALQTVATY
DRTTGDFVLNSEGSLARKDYIGGAAEHATVSAVFAQLVTGGPGEEATGRGVHCFVVPIRDADGNDLPGITTSDCGYKGGL
AGVDNGRIVFDNVRVPRANLLNRYADVAEDGTYSSPIENENKRFFTMLGTLIRGRVSVAATSGAAARKALTIASRYALVR
KQFDTPDSDDEVIIADYLVHQRKLLPLIARSYALAFAQNELTEELHQVQTADEVDADRQRQLESAAAGLKAMTSWHAQHA
ITVCREACGGAGYLDANQLTILRRDIDVFTTFEGDNTVLTQLVAKELLSAYAEDVRGLNAVGWTRFIAGMARDVILERSA
ARQVIQTILDSSDEDVEESDLSNRGTQLRLLRNREDHLLRTAATRMQRAQSDDEDPFEVFNSAQDHILKVGSAHTERVVL
EAFIEAIDSCDSKSAQELLEKLCDLFVYSALEADLSWFLMHRHVSTERAKAIRRGVNQLCEELRPHLGTLVDAFGIPEAL
LATEMIPDN
>Mature_649_residues
METRTAPADPEVLTSNLRVALDGRFGPIRDAAREYLNRADLLPDPSLTLEQARARSLRIMRELVPHGLPHAGFRTEHGGT
GDVGAAIVGIEMLGYADLSLMVKAGVQWGLFGGAIENLGTATHHEQYVVPLINLDVLGCFGMTETGHGSNVQALQTVATY
DRTTGDFVLNSEGSLARKDYIGGAAEHATVSAVFAQLVTGGPGEEATGRGVHCFVVPIRDADGNDLPGITTSDCGYKGGL
AGVDNGRIVFDNVRVPRANLLNRYADVAEDGTYSSPIENENKRFFTMLGTLIRGRVSVAATSGAAARKALTIASRYALVR
KQFDTPDSDDEVIIADYLVHQRKLLPLIARSYALAFAQNELTEELHQVQTADEVDADRQRQLESAAAGLKAMTSWHAQHA
ITVCREACGGAGYLDANQLTILRRDIDVFTTFEGDNTVLTQLVAKELLSAYAEDVRGLNAVGWTRFIAGMARDVILERSA
ARQVIQTILDSSDEDVEESDLSNRGTQLRLLRNREDHLLRTAATRMQRAQSDDEDPFEVFNSAQDHILKVGSAHTERVVL
EAFIEAIDSCDSKSAQELLEKLCDLFVYSALEADLSWFLMHRHVSTERAKAIRRGVNQLCEELRPHLGTLVDAFGIPEAL
LATEMIPDN

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI218563752, Length=566, Percent_Identity=33.2155477031802, Blast_Score=293, Evalue=4e-79,
Organism=Homo sapiens, GI30089972, Length=538, Percent_Identity=31.4126394052045, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI297206874, Length=538, Percent_Identity=31.4126394052045, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI156104864, Length=567, Percent_Identity=31.7460317460317, Blast_Score=255, Evalue=9e-68,
Organism=Homo sapiens, GI30089974, Length=559, Percent_Identity=30.5903398926655, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI156104866, Length=491, Percent_Identity=33.1975560081466, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI4501869, Length=542, Percent_Identity=29.520295202952, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI4557233, Length=381, Percent_Identity=26.7716535433071, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI4557235, Length=421, Percent_Identity=23.5154394299287, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI76496475, Length=421, Percent_Identity=23.5154394299287, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI4501859, Length=412, Percent_Identity=23.7864077669903, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17540842, Length=551, Percent_Identity=29.038112522686, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17568313, Length=517, Percent_Identity=29.7872340425532, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17506531, Length=634, Percent_Identity=25.5520504731861, Blast_Score=180, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17552648, Length=539, Percent_Identity=25.2319109461967, Blast_Score=179, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17506535, Length=534, Percent_Identity=26.0299625468165, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI71983346, Length=527, Percent_Identity=25.8064516129032, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI115532270, Length=527, Percent_Identity=25.8064516129032, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71983355, Length=527, Percent_Identity=25.8064516129032, Blast_Score=170, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17560134, Length=313, Percent_Identity=34.5047923322684, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17506533, Length=509, Percent_Identity=25.9332023575639, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=331, Percent_Identity=25.0755287009063, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17534899, Length=412, Percent_Identity=23.7864077669903, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6321233, Length=583, Percent_Identity=27.958833619211, Blast_Score=187, Evalue=7e-48,
Organism=Drosophila melanogaster, GI281365206, Length=620, Percent_Identity=29.1935483870968, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24585193, Length=620, Percent_Identity=29.1935483870968, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24585195, Length=620, Percent_Identity=29.1935483870968, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24585191, Length=620, Percent_Identity=29.1935483870968, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI221473076, Length=492, Percent_Identity=31.3008130081301, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI45550141, Length=492, Percent_Identity=31.3008130081301, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI17647123, Length=554, Percent_Identity=26.3537906137184, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24654595, Length=378, Percent_Identity=30.4232804232804, Blast_Score=177, Evalue=3e-44,
Organism=Drosophila melanogaster, GI17647125, Length=536, Percent_Identity=26.4925373134328, Blast_Score=162, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24640268, Length=357, Percent_Identity=30.812324929972, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI21356377, Length=404, Percent_Identity=26.2376237623762, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281363737, Length=443, Percent_Identity=24.8306997742664, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24646207, Length=405, Percent_Identity=24.1975308641975, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19920834, Length=310, Percent_Identity=27.741935483871, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666513, Length=396, Percent_Identity=24.2424242424242, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 70780; Mature: 70780

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRTAPADPEVLTSNLRVALDGRFGPIRDAAREYLNRADLLPDPSLTLEQARARSLRIM
CCCCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RELVPHGLPHAGFRTEHGGTGDVGAAIVGIEMLGYADLSLMVKAGVQWGLFGGAIENLGT
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
ATHHEQYVVPLINLDVLGCFGMTETGHGSNVQALQTVATYDRTTGDFVLNSEGSLARKDY
CCCCCCEEEEEECEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHH
IGGAAEHATVSAVFAQLVTGGPGEEATGRGVHCFVVPIRDADGNDLPGITTSDCGYKGGL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
AGVDNGRIVFDNVRVPRANLLNRYADVAEDGTYSSPIENENKRFFTMLGTLIRGRVSVAA
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEE
TSGAAARKALTIASRYALVRKQFDTPDSDDEVIIADYLVHQRKLLPLIARSYALAFAQNE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTEELHQVQTADEVDADRQRQLESAAAGLKAMTSWHAQHAITVCREACGGAGYLDANQLT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
ILRRDIDVFTTFEGDNTVLTQLVAKELLSAYAEDVRGLNAVGWTRFIAGMARDVILERSA
EEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARQVIQTILDSSDEDVEESDLSNRGTQLRLLRNREDHLLRTAATRMQRAQSDDEDPFEVF
HHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHH
NSAQDHILKVGSAHTERVVLEAFIEAIDSCDSKSAQELLEKLCDLFVYSALEADLSWFLM
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRHVSTERAKAIRRGVNQLCEELRPHLGTLVDAFGIPEALLATEMIPDN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
METRTAPADPEVLTSNLRVALDGRFGPIRDAAREYLNRADLLPDPSLTLEQARARSLRIM
CCCCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RELVPHGLPHAGFRTEHGGTGDVGAAIVGIEMLGYADLSLMVKAGVQWGLFGGAIENLGT
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
ATHHEQYVVPLINLDVLGCFGMTETGHGSNVQALQTVATYDRTTGDFVLNSEGSLARKDY
CCCCCCEEEEEECEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHH
IGGAAEHATVSAVFAQLVTGGPGEEATGRGVHCFVVPIRDADGNDLPGITTSDCGYKGGL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
AGVDNGRIVFDNVRVPRANLLNRYADVAEDGTYSSPIENENKRFFTMLGTLIRGRVSVAA
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEE
TSGAAARKALTIASRYALVRKQFDTPDSDDEVIIADYLVHQRKLLPLIARSYALAFAQNE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTEELHQVQTADEVDADRQRQLESAAAGLKAMTSWHAQHAITVCREACGGAGYLDANQLT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
ILRRDIDVFTTFEGDNTVLTQLVAKELLSAYAEDVRGLNAVGWTRFIAGMARDVILERSA
EEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARQVIQTILDSSDEDVEESDLSNRGTQLRLLRNREDHLLRTAATRMQRAQSDDEDPFEVF
HHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHH
NSAQDHILKVGSAHTERVVLEAFIEAIDSCDSKSAQELLEKLCDLFVYSALEADLSWFLM
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRHVSTERAKAIRRGVNQLCEELRPHLGTLVDAFGIPEALLATEMIPDN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]