| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630641
Identifier: 169630641
GI number: 169630641
Start: 3605001
End: 3605504
Strand: Reverse
Name: 169630641
Synonym: MAB_3561c
Alternate gene names: NA
Gene position: 3605504-3605001 (Counterclockwise)
Preceding gene: 169630642
Following gene: 169630640
Centisome position: 71.15
GC content: 61.31
Gene sequence:
>504_bases GTGGCCGACAAGGGTTTTCGCTCGCCCCTTACGGCGACAGAATGTAGGAGCGCACCGGTGATCTCATACGCAACCCTGAC GGTGCTGGCAGCCGTAGTCGAGGTAGTGCTGGTTGTGTGCGTGTTCGTATACGTGAGGCGTTTGCAGCGGCGGCACACCA CACCGATCAGTGAGCGCATCGGCAGCAGCGCGGCTGTGCTGACGAAGCTTCGCAAGCGGCGGCCGATGTCGCAAGAGGAG TTCGATCATGCACGCCAGGTGATCGCGGACCGGGGTTCGCTGTTGGTGTACTCGATCCCCGCGGCGATCTTCACCCTCGG GTGCTTCTACGTCGCGGGCAGCCTCGAACAATTACACGGCGCCACACCTTCCGAACGAACGTTTCTCGGGGTAATTCCCA TGATCACGTCCACCAGCCTGACCCTGCGGCTGCTCAAGAACATGCAGTTGAAGAGGCGTCTCAAACAATCCGAGTCCGCG ATCCCGGCCCAATCCCGGACGTGA
Upstream 100 bases:
>100_bases AGGTCGGTTCGACGATATGCATTGGCTTGCTGCTCGACACCTTGATCGTGCGATCGTTTATCGTCCCGTCGTTGGTGCGG CTTTTCGGAACTTGGTTCTG
Downstream 100 bases:
>100_bases GGCACGTGCGGCCGTAACCGTCCGCGCACTGTCGTCGCCGGTGCGGGAGCACTAGGAATGCGGTCAGATCGGTCGTTCAC AATCCCAGACGCATGTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MADKGFRSPLTATECRSAPVISYATLTVLAAVVEVVLVVCVFVYVRRLQRRHTTPISERIGSSAAVLTKLRKRRPMSQEE FDHARQVIADRGSLLVYSIPAAIFTLGCFYVAGSLEQLHGATPSERTFLGVIPMITSTSLTLRLLKNMQLKRRLKQSESA IPAQSRT
Sequences:
>Translated_167_residues MADKGFRSPLTATECRSAPVISYATLTVLAAVVEVVLVVCVFVYVRRLQRRHTTPISERIGSSAAVLTKLRKRRPMSQEE FDHARQVIADRGSLLVYSIPAAIFTLGCFYVAGSLEQLHGATPSERTFLGVIPMITSTSLTLRLLKNMQLKRRLKQSESA IPAQSRT >Mature_166_residues ADKGFRSPLTATECRSAPVISYATLTVLAAVVEVVLVVCVFVYVRRLQRRHTTPISERIGSSAAVLTKLRKRRPMSQEEF DHARQVIADRGSLLVYSIPAAIFTLGCFYVAGSLEQLHGATPSERTFLGVIPMITSTSLTLRLLKNMQLKRRLKQSESAI PAQSRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18490; Mature: 18359
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKGFRSPLTATECRSAPVISYATLTVLAAVVEVVLVVCVFVYVRRLQRRHTTPISERI CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GSSAAVLTKLRKRRPMSQEEFDHARQVIADRGSLLVYSIPAAIFTLGCFYVAGSLEQLHG CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHC ATPSERTFLGVIPMITSTSLTLRLLKNMQLKRRLKQSESAIPAQSRT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADKGFRSPLTATECRSAPVISYATLTVLAAVVEVVLVVCVFVYVRRLQRRHTTPISERI CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GSSAAVLTKLRKRRPMSQEEFDHARQVIADRGSLLVYSIPAAIFTLGCFYVAGSLEQLHG CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHC ATPSERTFLGVIPMITSTSLTLRLLKNMQLKRRLKQSESAIPAQSRT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA