Click here to switch to the map view.

The map label for this gene is desA3 [H]

Identifier: 169630629

GI number: 169630629

Start: 3592997

End: 3594220

Strand: Reverse

Name: desA3 [H]

Synonym: MAB_3548c

Alternate gene names: 169630629

Gene position: 3594220-3592997 (Counterclockwise)

Preceding gene: 169630630

Following gene: 169630626

Centisome position: 70.93

GC content: 62.58

Gene sequence:

>1224_bases
ATGGCGATTTCGGATATCCAGGAATTCGCGCACCTCACCGAGGCTGATGTTGAGGCGCTCGGGCACGAGTTGGACGCGAT
CCGTCGGGATGTCGAGGAATCGCTCGGCGCTGCCGACGCCCGCTATATCCGTCGCACCATCGCTGCCCAGCGCACACTGG
AGCTCACCGGCCGCATCCTGCTGGCGGCGAGCAAGAAGCGCTCCGCCTGGTGGGCGGGCGCGGTGACGCTCGGTGTGGCC
AAGATCGTCGAGAACATGGAGATCGGCCACAACGTCATGCACGGCCAGTGGGATTGGATGAACGATCCCGAGATTCACTC
CTCCAGCTGGGAGTGGGACATGGTGGATCCGGCCGAGCACTGGAAGCAGACTCACAACTACATCCACCACAAATACACCA
ACGTGCTCGGCATGGACGACGATGTGGGCTACGGGCTGCTGCGCGTCACACGCGACAAGAAGTGGAAGCCATTCAACCTG
GGCAACCTGCTCTACAACACGCTGCTGATGCTGCTCTTCGAATGGGGTGTTGGCACACAGCATCTGGAGCTGGGAAAGGT
GGCGCAGGGGCGGGCCGACAAGGAAGAATTCCGGGTCAAGCGTCAGGCGGCATTGACCAAGATGGGCAAGCAGGTCGCCA
AGGACTACGTGGCCTTCCCGGCGCTCAGCGCGCTCTCGCCCGCGGGCAGCTACCGCAAGACGGTCACCGCCAACCTGCTG
GCCAATGTCATTCGCAACATCTGGTCCAACGCGGTCATCTTCTGCGGTCACTTCCCGGACGGTGCCGAGAAGTTCACGAA
GCAGGACCTGGAGAACGAGACGCAAGGACAGTGGTACCTGCGACAGATGCTGGGCAGTGCCAACTTTGACGCGGGCCCCG
CGATGGCCTTCATGAGTGGCAATCTGTGCCATCAGATCGAGCATCACCTGTTCCCGGATCTGCCGAGCAACCGGCTGTCG
GCGGTATCGGTGCGGGTGCGTGAGCTGTGCGACAAGTACGACCTGCCGTACACCTCGGGTCCATTCCTGGTGCAATACGC
GAAGGCATGGCGAACCATCGCCAAGTTGTCGCTGCCGGACAAGTACCTGACATACACGGCCGACAACGCGCAGGAGACGC
GCAGCGTCAAGATGTTCGACGAGTTGGAACCGCACGAGCGGCGCGGGCTGAAGTCCGCGTTCGCCGCGGTGCGGGCGCGG
CGCAAGGCCCGTCACAAGGTCTAA

Upstream 100 bases:

>100_bases
CGGGGGATTGCGTTCTCGACGTGTGAGGTTAACGGCCTAGTAACCTACGGTCCCGTAAGTTACGCTATCGTAGGCACGAA
CCGGCGAAGGGAGCTCACGG

Downstream 100 bases:

>100_bases
ACCATCGGTCGCGGTCTAAAGGTCTAAATCGCCGGCCGCGAGAGGACATTTAAGTACAGCGCTTCTCGGGAAACGCGTCT
CTAGATGTCATCTCGCCCCG

Product: putative fatty acid desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAISDIQEFAHLTEADVEALGHELDAIRRDVEESLGAADARYIRRTIAAQRTLELTGRILLAASKKRSAWWAGAVTLGVA
KIVENMEIGHNVMHGQWDWMNDPEIHSSSWEWDMVDPAEHWKQTHNYIHHKYTNVLGMDDDVGYGLLRVTRDKKWKPFNL
GNLLYNTLLMLLFEWGVGTQHLELGKVAQGRADKEEFRVKRQAALTKMGKQVAKDYVAFPALSALSPAGSYRKTVTANLL
ANVIRNIWSNAVIFCGHFPDGAEKFTKQDLENETQGQWYLRQMLGSANFDAGPAMAFMSGNLCHQIEHHLFPDLPSNRLS
AVSVRVRELCDKYDLPYTSGPFLVQYAKAWRTIAKLSLPDKYLTYTADNAQETRSVKMFDELEPHERRGLKSAFAAVRAR
RKARHKV

Sequences:

>Translated_407_residues
MAISDIQEFAHLTEADVEALGHELDAIRRDVEESLGAADARYIRRTIAAQRTLELTGRILLAASKKRSAWWAGAVTLGVA
KIVENMEIGHNVMHGQWDWMNDPEIHSSSWEWDMVDPAEHWKQTHNYIHHKYTNVLGMDDDVGYGLLRVTRDKKWKPFNL
GNLLYNTLLMLLFEWGVGTQHLELGKVAQGRADKEEFRVKRQAALTKMGKQVAKDYVAFPALSALSPAGSYRKTVTANLL
ANVIRNIWSNAVIFCGHFPDGAEKFTKQDLENETQGQWYLRQMLGSANFDAGPAMAFMSGNLCHQIEHHLFPDLPSNRLS
AVSVRVRELCDKYDLPYTSGPFLVQYAKAWRTIAKLSLPDKYLTYTADNAQETRSVKMFDELEPHERRGLKSAFAAVRAR
RKARHKV
>Mature_406_residues
AISDIQEFAHLTEADVEALGHELDAIRRDVEESLGAADARYIRRTIAAQRTLELTGRILLAASKKRSAWWAGAVTLGVAK
IVENMEIGHNVMHGQWDWMNDPEIHSSSWEWDMVDPAEHWKQTHNYIHHKYTNVLGMDDDVGYGLLRVTRDKKWKPFNLG
NLLYNTLLMLLFEWGVGTQHLELGKVAQGRADKEEFRVKRQAALTKMGKQVAKDYVAFPALSALSPAGSYRKTVTANLLA
NVIRNIWSNAVIFCGHFPDGAEKFTKQDLENETQGQWYLRQMLGSANFDAGPAMAFMSGNLCHQIEHHLFPDLPSNRLSA
VSVRVRELCDKYDLPYTSGPFLVQYAKAWRTIAKLSLPDKYLTYTADNAQETRSVKMFDELEPHERRGLKSAFAAVRARR
KARHKV

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 46252; Mature: 46121

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISDIQEFAHLTEADVEALGHELDAIRRDVEESLGAADARYIRRTIAAQRTLELTGRIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEE
LAASKKRSAWWAGAVTLGVAKIVENMEIGHNVMHGQWDWMNDPEIHSSSWEWDMVDPAEH
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
WKQTHNYIHHKYTNVLGMDDDVGYGLLRVTRDKKWKPFNLGNLLYNTLLMLLFEWGVGTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
HLELGKVAQGRADKEEFRVKRQAALTKMGKQVAKDYVAFPALSALSPAGSYRKTVTANLL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ANVIRNIWSNAVIFCGHFPDGAEKFTKQDLENETQGQWYLRQMLGSANFDAGPAMAFMSG
HHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
NLCHQIEHHLFPDLPSNRLSAVSVRVRELCDKYDLPYTSGPFLVQYAKAWRTIAKLSLPD
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
KYLTYTADNAQETRSVKMFDELEPHERRGLKSAFAAVRARRKARHKV
HHEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AISDIQEFAHLTEADVEALGHELDAIRRDVEESLGAADARYIRRTIAAQRTLELTGRIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEE
LAASKKRSAWWAGAVTLGVAKIVENMEIGHNVMHGQWDWMNDPEIHSSSWEWDMVDPAEH
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
WKQTHNYIHHKYTNVLGMDDDVGYGLLRVTRDKKWKPFNLGNLLYNTLLMLLFEWGVGTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
HLELGKVAQGRADKEEFRVKRQAALTKMGKQVAKDYVAFPALSALSPAGSYRKTVTANLL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ANVIRNIWSNAVIFCGHFPDGAEKFTKQDLENETQGQWYLRQMLGSANFDAGPAMAFMSG
HHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
NLCHQIEHHLFPDLPSNRLSAVSVRVRELCDKYDLPYTSGPFLVQYAKAWRTIAKLSLPD
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
KYLTYTADNAQETRSVKMFDELEPHERRGLKSAFAAVRARRKARHKV
HHEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]