| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630582
Identifier: 169630582
GI number: 169630582
Start: 3542882
End: 3544243
Strand: Direct
Name: 169630582
Synonym: MAB_3501
Alternate gene names: NA
Gene position: 3542882-3544243 (Clockwise)
Preceding gene: 169630581
Following gene: 169630583
Centisome position: 69.92
GC content: 67.11
Gene sequence:
>1362_bases ATGGCCGACCTACCCTTTGGATTCGCTGCTGGCGACGACCCCGACCGTGAACGGGGCGACGCCGGACGCGGCTCGTCGGG CTCCGGTTCGTCGGGCGCGGACCCCTTCGGCTTCGGATCTGGTGGATTCAATCCCGCCGACCTGGGCCAGATCTTCACGC AACTGGGCCAGATGTTCAGCGGTGCGGCCGCCGGCGCGGCCAGTGGCCAGCCCGCGGGCCCGGTGAACTACGACATCGCC CGGCAACTGGCCTCAAGTTCAATCGGTTTCGTTGCCCCCATCACCGCGAGCACCACATCGGCGATCACCGACGCGGTGCA CCTGGCCGATACCTGGCTCGACGGCGCTACCTCGTTGCCTGCCGGTGCCACCCGCACCGCGGCCTGGACCGCGACGGACT GGGTGGACAACACCTTGGAAAACTGGAAGCGGCTCGTCGACCCTGTCGCCGAACAGATCTCAGGCATGTGGGCGGCAAAC CTCCCCGAGGAGGCTCAGAGCATGGCCGGCCCGCTGCTGGGCATGATGACTCAGATGGGCGGCATGGCCTTCGGCTCTCA GCTCGGCCAGGCCCTCGGTCAGCTATCCCGAGAGGTGTTGACCTCCACAGACATTGGGCTGCCATTGGGCCCCAAGGGCA CCGCCGCCCTGATGCCTGCCGCAATCGAGACATTCTCGGAGGGCCTGGAACAGTCCAAGGGCGAGATCATGACCTTCCTG GCTGCCCGCGAAGCCGCACACCATCGGCTGTTCAGCGGCGTGGGCTGGCTGACCATCCGGCTGATGGACACCGTCGAGCA GTATGCCAAGGGTATCTCCATCGATATGAGCGCCATCGAAGAGGCCGCACGCGGATTCAACCCCGCCGCGATGGGCGACC CATCAGAGATGGAACAGATTCTGTCCCAAGGTATTTTCGAACCGAAAACCACACCGCAGCAGGAACAGGCCCTGGAGCGG CTGGAAACCCTGCTGGCTCTGGTCGAGGGCTGGGTGCAGACCGTGGTGACCGACGCGCTCGGCGAGCGCATCCCGGCGAC TGCGGCCCTCAGCGAGACATTGCGCCGGCGCCGCGCCACCGGCGGCCCGGCCGAACAGACCTTCGCGACCCTGGTGGGGT TGGAGCTGCGCCCGCGCAAGCTGCGCGAGGCGGCGGACCTGTGGCGCAGGCTGACCGATGCCGTCGGCGTCGACAAGCGC GACGCGGTCTGGGCCCACCCCGACCTGATGCCCGATGCCAGCGATCTGGACAACCCGGCGGCATTCATCGATCGCATCAT CGGCGGCGACACCGATGCCGTCGATGACCCGATCGCACAGATCCAGAAGCTCGATCCCGGCACTCCCCCGACAGAGGACT GA
Upstream 100 bases:
>100_bases GGCGCGCTTCCTGGCCTAAATCAGGCAAAAGTGAGTGGCGTTCTCTCCGATTACGCCGTCAGCGTGATCCGGCCGCCGCT ACCAGCGGTACCGTGGAGAT
Downstream 100 bases:
>100_bases AGAAACTCCCCGCGCGACCATTCATCGCTGGTCAGCACCTGAATCGGGCTGTGGATAAACGGCATTCGGCCGCCCGTCAG GCACGCGGGGCATGCCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MADLPFGFAAGDDPDRERGDAGRGSSGSGSSGADPFGFGSGGFNPADLGQIFTQLGQMFSGAAAGAASGQPAGPVNYDIA RQLASSSIGFVAPITASTTSAITDAVHLADTWLDGATSLPAGATRTAAWTATDWVDNTLENWKRLVDPVAEQISGMWAAN LPEEAQSMAGPLLGMMTQMGGMAFGSQLGQALGQLSREVLTSTDIGLPLGPKGTAALMPAAIETFSEGLEQSKGEIMTFL AAREAAHHRLFSGVGWLTIRLMDTVEQYAKGISIDMSAIEEAARGFNPAAMGDPSEMEQILSQGIFEPKTTPQQEQALER LETLLALVEGWVQTVVTDALGERIPATAALSETLRRRRATGGPAEQTFATLVGLELRPRKLREAADLWRRLTDAVGVDKR DAVWAHPDLMPDASDLDNPAAFIDRIIGGDTDAVDDPIAQIQKLDPGTPPTED
Sequences:
>Translated_453_residues MADLPFGFAAGDDPDRERGDAGRGSSGSGSSGADPFGFGSGGFNPADLGQIFTQLGQMFSGAAAGAASGQPAGPVNYDIA RQLASSSIGFVAPITASTTSAITDAVHLADTWLDGATSLPAGATRTAAWTATDWVDNTLENWKRLVDPVAEQISGMWAAN LPEEAQSMAGPLLGMMTQMGGMAFGSQLGQALGQLSREVLTSTDIGLPLGPKGTAALMPAAIETFSEGLEQSKGEIMTFL AAREAAHHRLFSGVGWLTIRLMDTVEQYAKGISIDMSAIEEAARGFNPAAMGDPSEMEQILSQGIFEPKTTPQQEQALER LETLLALVEGWVQTVVTDALGERIPATAALSETLRRRRATGGPAEQTFATLVGLELRPRKLREAADLWRRLTDAVGVDKR DAVWAHPDLMPDASDLDNPAAFIDRIIGGDTDAVDDPIAQIQKLDPGTPPTED >Mature_452_residues ADLPFGFAAGDDPDRERGDAGRGSSGSGSSGADPFGFGSGGFNPADLGQIFTQLGQMFSGAAAGAASGQPAGPVNYDIAR QLASSSIGFVAPITASTTSAITDAVHLADTWLDGATSLPAGATRTAAWTATDWVDNTLENWKRLVDPVAEQISGMWAANL PEEAQSMAGPLLGMMTQMGGMAFGSQLGQALGQLSREVLTSTDIGLPLGPKGTAALMPAAIETFSEGLEQSKGEIMTFLA AREAAHHRLFSGVGWLTIRLMDTVEQYAKGISIDMSAIEEAARGFNPAAMGDPSEMEQILSQGIFEPKTTPQQEQALERL ETLLALVEGWVQTVVTDALGERIPATAALSETLRRRRATGGPAEQTFATLVGLELRPRKLREAADLWRRLTDAVGVDKRD AVWAHPDLMPDASDLDNPAAFIDRIIGGDTDAVDDPIAQIQKLDPGTPPTED
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47607; Mature: 47476
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLPFGFAAGDDPDRERGDAGRGSSGSGSSGADPFGFGSGGFNPADLGQIFTQLGQMFS CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GAAAGAASGQPAGPVNYDIARQLASSSIGFVAPITASTTSAITDAVHLADTWLDGATSLP HHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC AGATRTAAWTATDWVDNTLENWKRLVDPVAEQISGMWAANLPEEAQSMAGPLLGMMTQMG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH GMAFGSQLGQALGQLSREVLTSTDIGLPLGPKGTAALMPAAIETFSEGLEQSKGEIMTFL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAREAAHHRLFSGVGWLTIRLMDTVEQYAKGISIDMSAIEEAARGFNPAAMGDPSEMEQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH LSQGIFEPKTTPQQEQALERLETLLALVEGWVQTVVTDALGERIPATAALSETLRRRRAT HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC GGPAEQTFATLVGLELRPRKLREAADLWRRLTDAVGVDKRDAVWAHPDLMPDASDLDNPA CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHH AFIDRIIGGDTDAVDDPIAQIQKLDPGTPPTED HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ADLPFGFAAGDDPDRERGDAGRGSSGSGSSGADPFGFGSGGFNPADLGQIFTQLGQMFS CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GAAAGAASGQPAGPVNYDIARQLASSSIGFVAPITASTTSAITDAVHLADTWLDGATSLP HHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC AGATRTAAWTATDWVDNTLENWKRLVDPVAEQISGMWAANLPEEAQSMAGPLLGMMTQMG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH GMAFGSQLGQALGQLSREVLTSTDIGLPLGPKGTAALMPAAIETFSEGLEQSKGEIMTFL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAREAAHHRLFSGVGWLTIRLMDTVEQYAKGISIDMSAIEEAARGFNPAAMGDPSEMEQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH LSQGIFEPKTTPQQEQALERLETLLALVEGWVQTVVTDALGERIPATAALSETLRRRRAT HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC GGPAEQTFATLVGLELRPRKLREAADLWRRLTDAVGVDKRDAVWAHPDLMPDASDLDNPA CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHH AFIDRIIGGDTDAVDDPIAQIQKLDPGTPPTED HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA