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The map label for this gene is ylbL [H]

Identifier: 169630580

GI number: 169630580

Start: 3541299

End: 3542321

Strand: Reverse

Name: ylbL [H]

Synonym: MAB_3499c

Alternate gene names: 169630580

Gene position: 3542321-3541299 (Counterclockwise)

Preceding gene: 169630586

Following gene: 169630579

Centisome position: 69.91

GC content: 62.17

Gene sequence:

>1023_bases
ATGAATCGCCGCGTTGCGACGTTGCTGGTCGCGCTGATCCCGATTGTCGTCTTCGGGTTGTTGATGTCGGTGATCACCGT
GCCGTTCGTATCCCTGGGGCCGGGCCCCACCTTCAACACCCTCGGGCAGGTCGAGGGCAAGGAAGTGGTCGACATCAAGG
GCACCAAGGTCGACCCGGTCTCCGGTCACCTCAACATGACGACCGTTTCGCAGCGCGACGGCCTGACCTTGGCCGATGCG
TTGCGGTTGTGGGCAAGTGGCAGCGAGCAGCTGGTGCCGCGGGATGTGGTGTACCCGCCGGATCGGTCCAAGGATCAGGT
GGACAAGGAGAACGACCTCGAGTTCAAGAAGTCGGAGGAGAGCGCGGAGTTCGCGGCGCTCGGATATCTCAAGTACCCCG
CCGCGGTCACCGTTCTCACCATCAGCGACGACGGGCCCTCCAAGGGCAAGCTGCAGCAGAACGACGCGATCACGGCGGTT
AACGGTCATCCGGTGGCGACGTTGGACGAATTCACCGGACAGCTCAAGCTGACGAAGCCGGGCGACGAGGTGATGCTTGA
TTACAAGCGAAAGAACGCACCCAACGGAACGGTGAAAATCACGCTCGGCAAGAACGGGGATCGTGACTACGGATTCCTGG
GGGTCGGCGTGGTACAGGCGCCGTGGGCGCCGTTCACCATCGACTTCAACCTGGCCAATATCGGCGGGCCTTCCGCCGGT
TTGATGTTCAGCCTCGCCGTGATCGACAAGCTGACACCCGGCGAATTGGATGGTGGAAAGTTCGTCGCCGGAACGGGAAC
CATCGACGCCGAGGGCAAGGTGGGGCCCATCGGTGGTATCACGCACAAGATGTTTGCCGCCAAAGACGCTGGAGCGACGG
TATTTCTGGTGCCCGCGGCCAACTGTGCCGAGGCGAAGACCGATGGTGGGCAGGGGCTCACTCTGGTCAAGGTGGGCACC
TTGACCGAGGCGGTGGATGGACTTAATGCCCTCAACCGCGGTGAACAACCGCCCAGTTGTTAG

Upstream 100 bases:

>100_bases
ACGCCGTCGTACAGCAGGACAGGGGCTTGCTCGTTCATCGAACCTCCGCCTCGGAGCCTACCGGCGGGGTGCCGATCGCC
GGTTGCCATAAGGTGCAGGC

Downstream 100 bases:

>100_bases
CGAATCTCACCACCATCGATGCAGGACAGGTCCGGCCCTTCTGCGGCTACAGTGGGGCCTGGGTTTTCTATAGCGAATAT
TGAGCGGTTCGACACTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNRRVATLLVALIPIVVFGLLMSVITVPFVSLGPGPTFNTLGQVEGKEVVDIKGTKVDPVSGHLNMTTVSQRDGLTLADA
LRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEESAEFAALGYLKYPAAVTVLTISDDGPSKGKLQQNDAITAV
NGHPVATLDEFTGQLKLTKPGDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDFNLANIGGPSAG
LMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGGITHKMFAAKDAGATVFLVPAANCAEAKTDGGQGLTLVKVGT
LTEAVDGLNALNRGEQPPSC

Sequences:

>Translated_340_residues
MNRRVATLLVALIPIVVFGLLMSVITVPFVSLGPGPTFNTLGQVEGKEVVDIKGTKVDPVSGHLNMTTVSQRDGLTLADA
LRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEESAEFAALGYLKYPAAVTVLTISDDGPSKGKLQQNDAITAV
NGHPVATLDEFTGQLKLTKPGDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDFNLANIGGPSAG
LMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGGITHKMFAAKDAGATVFLVPAANCAEAKTDGGQGLTLVKVGT
LTEAVDGLNALNRGEQPPSC
>Mature_340_residues
MNRRVATLLVALIPIVVFGLLMSVITVPFVSLGPGPTFNTLGQVEGKEVVDIKGTKVDPVSGHLNMTTVSQRDGLTLADA
LRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEESAEFAALGYLKYPAAVTVLTISDDGPSKGKLQQNDAITAV
NGHPVATLDEFTGQLKLTKPGDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDFNLANIGGPSAG
LMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGGITHKMFAAKDAGATVFLVPAANCAEAKTDGGQGLTLVKVGT
LTEAVDGLNALNRGEQPPSC

Specific function: Unknown

COG id: COG3480

COG function: function code T; Predicted secreted protein containing a PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF00595 PDZ [H]

EC number: NA

Molecular weight: Translated: 35631; Mature: 35631

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRVATLLVALIPIVVFGLLMSVITVPFVSLGPGPTFNTLGQVEGKEVVDIKGTKVDPV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEECCCEECCC
SGHLNMTTVSQRDGLTLADALRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEE
CCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
SAEFAALGYLKYPAAVTVLTISDDGPSKGKLQQNDAITAVNGHPVATLDEFTGQLKLTKP
CCCEEEEEEEECCCEEEEEEEECCCCCCCCEECCCCEEEECCCCCEEHHHCCCEEEEECC
GDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDFNLANIGGPSAG
CCCEEEEEHHCCCCCCEEEEEECCCCCCCCCEEEECEEECCCCCEEEEEEECCCCCCCHH
LMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGGITHKMFAAKDAGATVFLVPAA
HEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHEECCCCCEEEEEECC
NCAEAKTDGGQGLTLVKVGTLTEAVDGLNALNRGEQPPSC
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNRRVATLLVALIPIVVFGLLMSVITVPFVSLGPGPTFNTLGQVEGKEVVDIKGTKVDPV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEECCCEECCC
SGHLNMTTVSQRDGLTLADALRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEE
CCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
SAEFAALGYLKYPAAVTVLTISDDGPSKGKLQQNDAITAVNGHPVATLDEFTGQLKLTKP
CCCEEEEEEEECCCEEEEEEEECCCCCCCCEECCCCEEEECCCCCEEHHHCCCEEEEECC
GDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDFNLANIGGPSAG
CCCEEEEEHHCCCCCCEEEEEECCCCCCCCCEEEECEEECCCCCEEEEEEECCCCCCCHH
LMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGGITHKMFAAKDAGATVFLVPAA
HEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHEECCCCCEEEEEECC
NCAEAKTDGGQGLTLVKVGTLTEAVDGLNALNRGEQPPSC
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]