Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169630575

Identifier: 169630575

GI number: 169630575

Start: 3535809

End: 3536138

Strand: Reverse

Name: 169630575

Synonym: MAB_3494c

Alternate gene names: NA

Gene position: 3536138-3535809 (Counterclockwise)

Preceding gene: 169630579

Following gene: 169630573

Centisome position: 69.79

GC content: 64.85

Gene sequence:

>330_bases
ATGCAGAAACGCTCGATCGACGCAGTGATACGTCAGCTGTTCGAGCGTGCCGACAACGGCCACAACGCCGCGGACACGGT
TGTCGGCGGGCATGAACGGATACTGCGCCAGACGGTGATTGCCCTGCGTGAAGGCGCCGAACTGGGTGAGCACGAGAGCC
CGGGCGAGGCCACCATCTACGTCATCCGAGGTTCGGTGCGTCTGGTGGCAGGCGCCGAACATTGGGACGGTCGTGCGGGT
GATCTGATCGAGATTCCCGATGCCCGACACTCGCTGCAGGCTCTGACCGACTCGGCGGTCCTGCTCACCGTGGCCAAGCG
CCGTGGCTAG

Upstream 100 bases:

>100_bases
GCCAGGGTATGGCAGTGCGCGGCAGGGTGCCGATCGGACAGCCCGGACTGCGTTGTTCGGGAGGGTTGACGGGCCTGCCG
CCGGGGCATGAAATGGAGTG

Downstream 100 bases:

>100_bases
CACTGACGGCTAGCGCCGCGATCTAGCCGTGGCAGGTGGCCGTCGAGGCGTGGCCGGTGGTGGTGTCCTCGACCTTGACC
TTGCCGTTGACGATCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Domain-Containing Protein; MarR Family Transcriptional Regulator; Cupin 2 Conserved Barrel Domain Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIYVIRGSVRLVAGAEHWDGRAG
DLIEIPDARHSLQALTDSAVLLTVAKRRG

Sequences:

>Translated_109_residues
MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIYVIRGSVRLVAGAEHWDGRAG
DLIEIPDARHSLQALTDSAVLLTVAKRRG
>Mature_109_residues
MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIYVIRGSVRLVAGAEHWDGRAG
DLIEIPDARHSLQALTDSAVLLTVAKRRG

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11858; Mature: 11858

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIY
CCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
VIRGSVRLVAGAEHWDGRAGDLIEIPDARHSLQALTDSAVLLTVAKRRG
EEECCEEEEECCCCCCCCCCCEEECCCCHHHHHHHCCCHHEEEEECCCC
>Mature Secondary Structure
MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIY
CCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
VIRGSVRLVAGAEHWDGRAGDLIEIPDARHSLQALTDSAVLLTVAKRRG
EEECCEEEEECCCCCCCCCCCEEECCCCHHHHHHHCCCHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA