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The map label for this gene is 169630520

Identifier: 169630520

GI number: 169630520

Start: 3483606

End: 3484055

Strand: Direct

Name: 169630520

Synonym: MAB_3439

Alternate gene names: NA

Gene position: 3483606-3484055 (Clockwise)

Preceding gene: 169630519

Following gene: 169630523

Centisome position: 68.75

GC content: 61.33

Gene sequence:

>450_bases
ATGCGACTGTGGTCCCTCCATCCTGGGAATCTCGACGCCAGGGGGCTGGTCGCATGCTGGCGCGAAACCTTGTTGGCCCA
AAAGGTGTTGCAGGGGCGTACGCGCGGCTACCGTAACCATCCGCAGCTGGAGCGGTTCAAGTCGTTGGATAGGCCGCTCG
CCGGGATCGGTGCATACCTGGTTGGTCTTGTCGATGAGGCCGACCGGCGCGGCTATCGATTCAACCGCGCGCTGATCGAC
ATACCTGCCACCGTCTCCGAACCTTTGATCGATGTTCATCGCGGGCAACTGGCCTACGAACGATGGCTGCTGGACACCAA
ACTGGCACAACGCGATCCGGACCTACTTGCCACTAGCAATCCCCGCCGACTGCGCCCGCATCCCATCTTTCGGCCGGTTC
GCGGCAACATCGAAGACTGGGAAAAGGTGCTGCCCACTTATCAGGCGTGA

Upstream 100 bases:

>100_bases
GAAAGCACAAGAAGAGTTGTGGCGACGATCCGGGGAGTTGGTGAGTCTGTAACTCCGTGTCTGCGTGGCCTGCGTGGCCG
TCTTCGGGTACAGAGAAGGC

Downstream 100 bases:

>100_bases
GGTATCACCGGCCGGTCAGCGCCGCCGCGTAGAGCCTGAGCTCGTCGCCAACATTGGCCATGGTGGCGGCGCCTTCGATT
TCCATCGCCGCCTCGAACCT

Product: putative pyrimidine dimer DNA glycosylase

Products: NA

Alternate protein names: DNA-(Apurinic Or Apyrimidinic Site) Lyase; Serine/Threonine Protein Kinase; 50S Ribosomal Protein L

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRLWSLHPGNLDARGLVACWRETLLAQKVLQGRTRGYRNHPQLERFKSLDRPLAGIGAYLVGLVDEADRRGYRFNRALID
IPATVSEPLIDVHRGQLAYERWLLDTKLAQRDPDLLATSNPRRLRPHPIFRPVRGNIEDWEKVLPTYQA

Sequences:

>Translated_149_residues
MRLWSLHPGNLDARGLVACWRETLLAQKVLQGRTRGYRNHPQLERFKSLDRPLAGIGAYLVGLVDEADRRGYRFNRALID
IPATVSEPLIDVHRGQLAYERWLLDTKLAQRDPDLLATSNPRRLRPHPIFRPVRGNIEDWEKVLPTYQA
>Mature_149_residues
MRLWSLHPGNLDARGLVACWRETLLAQKVLQGRTRGYRNHPQLERFKSLDRPLAGIGAYLVGLVDEADRRGYRFNRALID
IPATVSEPLIDVHRGQLAYERWLLDTKLAQRDPDLLATSNPRRLRPHPIFRPVRGNIEDWEKVLPTYQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17242; Mature: 17242

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWSLHPGNLDARGLVACWRETLLAQKVLQGRTRGYRNHPQLERFKSLDRPLAGIGAYL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
VGLVDEADRRGYRFNRALIDIPATVSEPLIDVHRGQLAYERWLLDTKLAQRDPDLLATSN
HHHHHHHHCCCEEECCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCC
PRRLRPHPIFRPVRGNIEDWEKVLPTYQA
CCCCCCCCCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MRLWSLHPGNLDARGLVACWRETLLAQKVLQGRTRGYRNHPQLERFKSLDRPLAGIGAYL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
VGLVDEADRRGYRFNRALIDIPATVSEPLIDVHRGQLAYERWLLDTKLAQRDPDLLATSN
HHHHHHHHCCCEEECCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCC
PRRLRPHPIFRPVRGNIEDWEKVLPTYQA
CCCCCCCCCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA