| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630511
Identifier: 169630511
GI number: 169630511
Start: 3475786
End: 3476505
Strand: Reverse
Name: 169630511
Synonym: MAB_3430c
Alternate gene names: NA
Gene position: 3476505-3475786 (Counterclockwise)
Preceding gene: 169630512
Following gene: 169630509
Centisome position: 68.61
GC content: 66.67
Gene sequence:
>720_bases GTGAACTGTCAGGAAGTGCGCGAGCAGCTGTCGGCATGGGTCGATGGTGAGCAGGCAAGCGTCGCGCGTAAGCGGCTGGA TGAGCATGTGCTCTCCTGCGCTTCCTGCCGCGAATGGCTGGGGCGGGCCCGCGGGCTCGACCGCCAGTTCGCGTACGCAC GTTCGGCCCCGACCCGCGATCTGACCGGACAGATCCTGGCGGCCGCCGCCGTCGAGCCCCTTACGCCGATGGCGCGATAC GCCCACTGGGCGCGGCACAACATCAACCGGTGCGCGTTGGTGCTCATCGGGTTACTTCAGCTCGGTGTGGCCGGAATGCA GGTCGCGGGAATCGACTTCGGCATGGTCTCGGCCCACCATCATGGCGCGATGACGGGTGCACACCTCATGAACGAATCCA CCGCCTGGGTGGTGGCCCTGGGTGTGGCCATGGTGATCGCCGGGGTGCGACCTGCCGCCGCAGCCGGCATGGCAACGGTG TTGGGTGCGTTCGCGCTCGTGCTCACCGGGTATGTCATCAACGATGCCGTCAACGATCAGGTCACGCTTGCCCGCATCAT CAGCCACTTGCCGGTGCTACTCGGATTGATCTTCGCGCTGCTGGTTCTGCGCGACTACCGGGCCGGCCGTACGCCGCCCA ATCAGCACCGTGCCGTGTTCCTTGACGAGGTGGCAGCGGGGGAGCGACACCTGCGCTCCGCCGATAACTCAGCCGCCTGA
Upstream 100 bases:
>100_bases GTGCGGTGGCTGACTCGAATCAGCTGCTTGGAGCCCTGTAAACGCGTATAGATCAGGGGGTCTTCACACGCCGGTCGGCG CGATAGGCGACGATGGAGTG
Downstream 100 bases:
>100_bases GGCCGCGGTCCCGCGGCGGCTCGCCACCAATCCGCCGGCAAGGTCGATGGCGAGGAACGCGGCCAACGAGATTCCCAGTA GCGGCATGAACCAGCCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWLGRARGLDRQFAYARSAPTRDLTGQILAAAAVEPLTPMARY AHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGMVSAHHHGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATV LGAFALVLTGYVINDAVNDQVTLARIISHLPVLLGLIFALLVLRDYRAGRTPPNQHRAVFLDEVAAGERHLRSADNSAA
Sequences:
>Translated_239_residues MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWLGRARGLDRQFAYARSAPTRDLTGQILAAAAVEPLTPMARY AHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGMVSAHHHGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATV LGAFALVLTGYVINDAVNDQVTLARIISHLPVLLGLIFALLVLRDYRAGRTPPNQHRAVFLDEVAAGERHLRSADNSAA >Mature_239_residues MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWLGRARGLDRQFAYARSAPTRDLTGQILAAAAVEPLTPMARY AHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGMVSAHHHGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATV LGAFALVLTGYVINDAVNDQVTLARIISHLPVLLGLIFALLVLRDYRAGRTPPNQHRAVFLDEVAAGERHLRSADNSAA
Specific function: Unknown
COG id: COG5660
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25613; Mature: 25613
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWLGRARGLDRQFAYARSAPTRD CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH LTGQILAAAAVEPLTPMARYAHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGMVSAHH HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH HGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATVLGAFALVLTGYVINDAVNDQ HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VTLARIISHLPVLLGLIFALLVLRDYRAGRTPPNQHRAVFLDEVAAGERHLRSADNSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWLGRARGLDRQFAYARSAPTRD CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH LTGQILAAAAVEPLTPMARYAHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGMVSAHH HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH HGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATVLGAFALVLTGYVINDAVNDQ HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VTLARIISHLPVLLGLIFALLVLRDYRAGRTPPNQHRAVFLDEVAAGERHLRSADNSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]