| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630510
Identifier: 169630510
GI number: 169630510
Start: 3474394
End: 3475797
Strand: Direct
Name: 169630510
Synonym: MAB_3429
Alternate gene names: NA
Gene position: 3474394-3475797 (Clockwise)
Preceding gene: 169630508
Following gene: 169630516
Centisome position: 68.57
GC content: 67.59
Gene sequence:
>1404_bases GTGACTTATACCGAGGACCGGCCCGATGCTCGCGAGTCCCAGCCGGACACCGTGTGGGGGCGATTCGCACCGATCGTACT GCGCCTGCACTTCTATGCGGGGCTCCTCGTCGGCCCGTTTCTGCTGATCGCGGCCCTGACCGGACTGGCATACGCCCTGG TAGGGCAGGTCGATGCCGCCGTCTATCGGCACGAACTCAAGGTCGATTCGGTGGGCCCCCAGCAATTGCCACTGTCACAA CAGGTGTCGGTGGCGACCGCTGCGCAGCCGTCCGGCACGGTGACCTCGATCCGTCCCCCGGCGAACCCCGACGACACCAC CCGGGTGGTGCTGGCCGTCCCGGATGTTCCCGAGGATTACTCCCGCACCGTGTTCGTCGACCCGTACAGCGGCGAGATTC GCGGCACACTGACCACCTACGGCGAGTGGCTGCCGGTGCGTGCCTGGTTCGACGAACTGCACCGAAACCTGCATCTGGGC GCGATCGGGCGCAACTACAGCGAGCTTGCGGCCAGCTGGCTCTGGGTGGTCGCCCTGGGTGGGCTGTTCCTGTGGATCGG TTACCGCCGCCGCACCGGCCGGTTGCGGCGGATCGCGGTGCCCGATCGCGACGCCACCCCGCGCCGGCGCAGATTGACCT GGCACGGCGCCGTCGGTGTCTGGATAGTTGTTGGGCTGCTGGCCCTTTCGGTCACCGGGCTCACCTGGTCGCGCTACGCC GGTACCAATATCGGCGACCTCACGCAGGCCATTCGGCCAGGCTTATCGACCGAACTCGATCCGGCCTCGGCCACACCGAT GACCGGGCATGAACACCATGGCGCCGCGGCCACGTCGCGTGGTGAGCCGCTTGCCGGGATCAACACGGTGCTGCAGACAG TGCGTGATGCCGGGCTGCGCGGCCCGCTCTGGATGACGCCGCCGCCGGCGCCCAATACCGCGTGGCTGGTCTCGGAACGT AAGCGCAGCATCCCTACCCAGCTCGACGCCATCACCGTGAACCCATCCAGCGGGGAGATCACCGGGCGCAGCAATTTCTC GGAGTGGTCATTGCTGCAGAAGTCGACGGAATGGGCGATAGACGGCCACATGGGCGTCCTGTTCGGCATCCCCAATCAGA TCCTGGTAGCCCTCGTCGTGATCGGTCTCATCACCGTCATCACTCGCGGCTACCTGATGTGGTGGCGCAGGCGCCCCACC AAGAGTGGGCGCTGGCCGGTGCCGCCGCGACGAGGCGGCCTGCTCGCGCTCAAGCCGTTAGAGCTGGCGATCCTGGCCGT GGTCGTCGTCGGGGTTGGCTGGTTCATGCCGCTACTGGGAATCTCGTTGGCCGCGTTCCTCGCCATCGACCTTGCCGGCG GATTGGTGGCGAGCCGCCGCGGGACCGCGGCCTCAGGCGGCTGA
Upstream 100 bases:
>100_bases CTCGTCGTCGGTGCCGGTGGCCACGAGTCCTACTCTATGTCGTAGACGTTCGGGGGTGAACAGCGGGAACTCTTTAACCG ATTCATCCGACCAATATCCC
Downstream 100 bases:
>100_bases GTTATCGGCGGAGCGCAGGTGTCGCTCCCCCGCTGCCACCTCGTCAAGGAACACGGCACGGTGCTGATTGGGCGGCGTAC GGCCGGCCCGGTAGTCGCGC
Product: putative integral membrane protein
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Sulfite Reductase; Peptidase; PepSY-Associated TM Helix Family Protein; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Sulfite Reductase Flavoprotein Subunit Alpha; Transmembrane Transporter; Flavodoxin/Nitric Oxide Synthase; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTYTEDRPDARESQPDTVWGRFAPIVLRLHFYAGLLVGPFLLIAALTGLAYALVGQVDAAVYRHELKVDSVGPQQLPLSQ QVSVATAAQPSGTVTSIRPPANPDDTTRVVLAVPDVPEDYSRTVFVDPYSGEIRGTLTTYGEWLPVRAWFDELHRNLHLG AIGRNYSELAASWLWVVALGGLFLWIGYRRRTGRLRRIAVPDRDATPRRRRLTWHGAVGVWIVVGLLALSVTGLTWSRYA GTNIGDLTQAIRPGLSTELDPASATPMTGHEHHGAAATSRGEPLAGINTVLQTVRDAGLRGPLWMTPPPAPNTAWLVSER KRSIPTQLDAITVNPSSGEITGRSNFSEWSLLQKSTEWAIDGHMGVLFGIPNQILVALVVIGLITVITRGYLMWWRRRPT KSGRWPVPPRRGGLLALKPLELAILAVVVVGVGWFMPLLGISLAAFLAIDLAGGLVASRRGTAASGG
Sequences:
>Translated_467_residues MTYTEDRPDARESQPDTVWGRFAPIVLRLHFYAGLLVGPFLLIAALTGLAYALVGQVDAAVYRHELKVDSVGPQQLPLSQ QVSVATAAQPSGTVTSIRPPANPDDTTRVVLAVPDVPEDYSRTVFVDPYSGEIRGTLTTYGEWLPVRAWFDELHRNLHLG AIGRNYSELAASWLWVVALGGLFLWIGYRRRTGRLRRIAVPDRDATPRRRRLTWHGAVGVWIVVGLLALSVTGLTWSRYA GTNIGDLTQAIRPGLSTELDPASATPMTGHEHHGAAATSRGEPLAGINTVLQTVRDAGLRGPLWMTPPPAPNTAWLVSER KRSIPTQLDAITVNPSSGEITGRSNFSEWSLLQKSTEWAIDGHMGVLFGIPNQILVALVVIGLITVITRGYLMWWRRRPT KSGRWPVPPRRGGLLALKPLELAILAVVVVGVGWFMPLLGISLAAFLAIDLAGGLVASRRGTAASGG >Mature_466_residues TYTEDRPDARESQPDTVWGRFAPIVLRLHFYAGLLVGPFLLIAALTGLAYALVGQVDAAVYRHELKVDSVGPQQLPLSQQ VSVATAAQPSGTVTSIRPPANPDDTTRVVLAVPDVPEDYSRTVFVDPYSGEIRGTLTTYGEWLPVRAWFDELHRNLHLGA IGRNYSELAASWLWVVALGGLFLWIGYRRRTGRLRRIAVPDRDATPRRRRLTWHGAVGVWIVVGLLALSVTGLTWSRYAG TNIGDLTQAIRPGLSTELDPASATPMTGHEHHGAAATSRGEPLAGINTVLQTVRDAGLRGPLWMTPPPAPNTAWLVSERK RSIPTQLDAITVNPSSGEITGRSNFSEWSLLQKSTEWAIDGHMGVLFGIPNQILVALVVIGLITVITRGYLMWWRRRPTK SGRWPVPPRRGGLLALKPLELAILAVVVVGVGWFMPLLGISLAAFLAIDLAGGLVASRRGTAASGG
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50709; Mature: 50578
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTEDRPDARESQPDTVWGRFAPIVLRLHFYAGLLVGPFLLIAALTGLAYALVGQVDAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYRHELKVDSVGPQQLPLSQQVSVATAAQPSGTVTSIRPPANPDDTTRVVLAVPDVPEDY HHHHHCEECCCCCCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCC SRTVFVDPYSGEIRGTLTTYGEWLPVRAWFDELHRNLHLGAIGRNYSELAASWLWVVALG CCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH GLFLWIGYRRRTGRLRRIAVPDRDATPRRRRLTWHGAVGVWIVVGLLALSVTGLTWSRYA HHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCEEHHCC GTNIGDLTQAIRPGLSTELDPASATPMTGHEHHGAAATSRGEPLAGINTVLQTVRDAGLR CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC GPLWMTPPPAPNTAWLVSERKRSIPTQLDAITVNPSSGEITGRSNFSEWSLLQKSTEWAI CCCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEE DGHMGVLFGIPNQILVALVVIGLITVITRGYLMWWRRRPTKSGRWPVPPRRGGLLALKPL CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHH ELAILAVVVVGVGWFMPLLGISLAAFLAIDLAGGLVASRRGTAASGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC >Mature Secondary Structure TYTEDRPDARESQPDTVWGRFAPIVLRLHFYAGLLVGPFLLIAALTGLAYALVGQVDAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYRHELKVDSVGPQQLPLSQQVSVATAAQPSGTVTSIRPPANPDDTTRVVLAVPDVPEDY HHHHHCEECCCCCCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCC SRTVFVDPYSGEIRGTLTTYGEWLPVRAWFDELHRNLHLGAIGRNYSELAASWLWVVALG CCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH GLFLWIGYRRRTGRLRRIAVPDRDATPRRRRLTWHGAVGVWIVVGLLALSVTGLTWSRYA HHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCEEHHCC GTNIGDLTQAIRPGLSTELDPASATPMTGHEHHGAAATSRGEPLAGINTVLQTVRDAGLR CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC GPLWMTPPPAPNTAWLVSERKRSIPTQLDAITVNPSSGEITGRSNFSEWSLLQKSTEWAI CCCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEE DGHMGVLFGIPNQILVALVVIGLITVITRGYLMWWRRRPTKSGRWPVPPRRGGLLALKPL CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHH ELAILAVVVVGVGWFMPLLGISLAAFLAIDLAGGLVASRRGTAASGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA