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The map label for this gene is soxA [H]

Identifier: 169630482

GI number: 169630482

Start: 3449345

End: 3450796

Strand: Direct

Name: soxA [H]

Synonym: MAB_3401

Alternate gene names: 169630482

Gene position: 3449345-3450796 (Clockwise)

Preceding gene: 169630481

Following gene: 169630483

Centisome position: 68.07

GC content: 64.05

Gene sequence:

>1452_bases
ATGACCCGCGTCATCCGTTTCAACGCGTTCGATATGAATTGTGTTGCGCACCAATCCCCCGGCCTATGGCGGCACCCCGA
CGACCAGTCCTGGCGGTACAAAGACCTGTCCTACTGGACAAACCTTGCCACGCTGTTGGAGCGCGGCCGTTTCGACGGAC
TGTTCATCGCCGATGTGCTTGGCACCTATGACATCTACGGCGCCAGCGACGAAGCAGCCATCCGCCAGGCAGCGCAGATT
CCGGTCGCCGATCCTCTCTTGTTGGTCTCGGCGATGGCGCTGGTCACCGAGCACCTAGGCTTTGGTGTCACCACGGGTAC
CGGCTTCGAGCATCCATATCCGTTCGCGCGCAGGCTGTCCACCCTCGATCATCTCACCGGTGGACGGGTCGGGTGGAACG
TCGTCACCGGATATCTACCGGCCGCCGCTCGCAACATGGGTCAGACCGACCAGCCGGCACACGATGCCAGGTACGACCAC
GCCGACGAGTATCTCGAGGTGCTCTACAAGTTGTGGGAAGGCTCCTGGGAGGACGACGCCGTCGTCCGCGATGCCGCACG
GGGCGTCTTCACCGACCCCGACAAGGTGCATCACATCGGTCACGAGGGCACACACTTCACCGTCCCCGGGGTGCACTTGG
TAGAACCGTCACCGCAGCGCACTCCCGTGATCTATCAGGCCGGATCCTCGCCGCGGGGGGTGCGCTTTGCCGCGGAGAAC
GCCGAGGCGGTATTCACCGCCGCCCCCACCAAAGAACTGCTGCGGCAGACAGTGACCACCATCCGTCGCGAGCTGGAGCT
TGCCGGACGGGATCCCTACTCCGCCAAAATTTTCAACCTCACCACGGTGGTCACCGGAGAGAACTCCGAAGCGGCACATG
CCAAACACGCCGAGCTGCTTGGCTACGGCAGCGCCGAAGGTGCGCTGGTGTTCATGTCCGGCTGGATGGGTGTGGACCTG
GCCCGCTACGGTCTGGATGAACCGATCGGAAATGTGGACTCCAACGCCATCCTGTCGGCGGTGGCGGCATTTCAGGCAGC
CACCGCGGACGGCCGTGAGTGGAAAGTGCGCGATATCGCCGAGTGGGGCGAGATCGGCGGGATGGGACCGCGCATCGTCG
GCTCCGGCACCGAGGTGGCCGACACCCTGCAGGAGTGGGTGGAGGAAACCGATGTCGACGGCTTCAACCTGGCGTATGCG
ATCACTCCGGGTACCTTCGAGGATTTCATCGAGTACGTGGTACCGGTGCTGACCGAGCGTGGTGCCTATCAAAGCTCCTA
CACCCCAGGAACATTGCGTCACAAGCTGCTGGGCCACGGCGACCGGCTACCCGAGGAGCATCGGGGCGCCAAGTATCGGA
TCGGTGGACCGTTATCGACGATCATCGACCGGCCGTCGACGGTGCCGTCCTCATCGGGTTCCACGGCGCCAGCCCCGACG
CCCGGGCGGTAG

Upstream 100 bases:

>100_bases
ACCGCTTCGTCATCGATACCCAAACCCTCTGAGACGCTTCGAAATTATCACCCCGAGTACAACCGGTGACTGATGCCGTC
GGGGTGCCGATGCTGAGGGG

Downstream 100 bases:

>100_bases
TTTCCATGCATGAAGAACAGCGTCGCACTGGGCATGTGCTTCTCGGCCGCATTGCTGTGCGCGGCAACCGCTAGCACCGG
TTGCGCTGCCGCCGCACCGC

Product: putative monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTRVIRFNAFDMNCVAHQSPGLWRHPDDQSWRYKDLSYWTNLATLLERGRFDGLFIADVLGTYDIYGASDEAAIRQAAQI
PVADPLLLVSAMALVTEHLGFGVTTGTGFEHPYPFARRLSTLDHLTGGRVGWNVVTGYLPAAARNMGQTDQPAHDARYDH
ADEYLEVLYKLWEGSWEDDAVVRDAARGVFTDPDKVHHIGHEGTHFTVPGVHLVEPSPQRTPVIYQAGSSPRGVRFAAEN
AEAVFTAAPTKELLRQTVTTIRRELELAGRDPYSAKIFNLTTVVTGENSEAAHAKHAELLGYGSAEGALVFMSGWMGVDL
ARYGLDEPIGNVDSNAILSAVAAFQAATADGREWKVRDIAEWGEIGGMGPRIVGSGTEVADTLQEWVEETDVDGFNLAYA
ITPGTFEDFIEYVVPVLTERGAYQSSYTPGTLRHKLLGHGDRLPEEHRGAKYRIGGPLSTIIDRPSTVPSSSGSTAPAPT
PGR

Sequences:

>Translated_483_residues
MTRVIRFNAFDMNCVAHQSPGLWRHPDDQSWRYKDLSYWTNLATLLERGRFDGLFIADVLGTYDIYGASDEAAIRQAAQI
PVADPLLLVSAMALVTEHLGFGVTTGTGFEHPYPFARRLSTLDHLTGGRVGWNVVTGYLPAAARNMGQTDQPAHDARYDH
ADEYLEVLYKLWEGSWEDDAVVRDAARGVFTDPDKVHHIGHEGTHFTVPGVHLVEPSPQRTPVIYQAGSSPRGVRFAAEN
AEAVFTAAPTKELLRQTVTTIRRELELAGRDPYSAKIFNLTTVVTGENSEAAHAKHAELLGYGSAEGALVFMSGWMGVDL
ARYGLDEPIGNVDSNAILSAVAAFQAATADGREWKVRDIAEWGEIGGMGPRIVGSGTEVADTLQEWVEETDVDGFNLAYA
ITPGTFEDFIEYVVPVLTERGAYQSSYTPGTLRHKLLGHGDRLPEEHRGAKYRIGGPLSTIIDRPSTVPSSSGSTAPAPT
PGR
>Mature_482_residues
TRVIRFNAFDMNCVAHQSPGLWRHPDDQSWRYKDLSYWTNLATLLERGRFDGLFIADVLGTYDIYGASDEAAIRQAAQIP
VADPLLLVSAMALVTEHLGFGVTTGTGFEHPYPFARRLSTLDHLTGGRVGWNVVTGYLPAAARNMGQTDQPAHDARYDHA
DEYLEVLYKLWEGSWEDDAVVRDAARGVFTDPDKVHHIGHEGTHFTVPGVHLVEPSPQRTPVIYQAGSSPRGVRFAAENA
EAVFTAAPTKELLRQTVTTIRRELELAGRDPYSAKIFNLTTVVTGENSEAAHAKHAELLGYGSAEGALVFMSGWMGVDLA
RYGLDEPIGNVDSNAILSAVAAFQAATADGREWKVRDIAEWGEIGGMGPRIVGSGTEVADTLQEWVEETDVDGFNLAYAI
TPGTFEDFIEYVVPVLTERGAYQSSYTPGTLRHKLLGHGDRLPEEHRGAKYRIGGPLSTIIDRPSTVPSSSGSTAPAPTP
GR

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=236, Percent_Identity=28.3898305084746, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 52690; Mature: 52559

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVIRFNAFDMNCVAHQSPGLWRHPDDQSWRYKDLSYWTNLATLLERGRFDGLFIADVL
CCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHH
GTYDIYGASDEAAIRQAAQIPVADPLLLVSAMALVTEHLGFGVTTGTGFEHPYPFARRLS
CCHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
TLDHLTGGRVGWNVVTGYLPAAARNMGQTDQPAHDARYDHADEYLEVLYKLWEGSWEDDA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCHH
VVRDAARGVFTDPDKVHHIGHEGTHFTVPGVHLVEPSPQRTPVIYQAGSSPRGVRFAAEN
HHHHHHCCCCCCCHHHHHCCCCCCEEECCCEEEECCCCCCCCEEEECCCCCCCEEEEECC
AEAVFTAAPTKELLRQTVTTIRRELELAGRDPYSAKIFNLTTVVTGENSEAAHAKHAELL
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHH
GYGSAEGALVFMSGWMGVDLARYGLDEPIGNVDSNAILSAVAAFQAATADGREWKVRDIA
CCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHH
EWGEIGGMGPRIVGSGTEVADTLQEWVEETDVDGFNLAYAITPGTFEDFIEYVVPVLTER
HHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
GAYQSSYTPGTLRHKLLGHGDRLPEEHRGAKYRIGGPLSTIIDRPSTVPSSSGSTAPAPT
CCCCCCCCCHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCC
PGR
CCC
>Mature Secondary Structure 
TRVIRFNAFDMNCVAHQSPGLWRHPDDQSWRYKDLSYWTNLATLLERGRFDGLFIADVL
CEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHH
GTYDIYGASDEAAIRQAAQIPVADPLLLVSAMALVTEHLGFGVTTGTGFEHPYPFARRLS
CCHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
TLDHLTGGRVGWNVVTGYLPAAARNMGQTDQPAHDARYDHADEYLEVLYKLWEGSWEDDA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCHH
VVRDAARGVFTDPDKVHHIGHEGTHFTVPGVHLVEPSPQRTPVIYQAGSSPRGVRFAAEN
HHHHHHCCCCCCCHHHHHCCCCCCEEECCCEEEECCCCCCCCEEEECCCCCCCEEEEECC
AEAVFTAAPTKELLRQTVTTIRRELELAGRDPYSAKIFNLTTVVTGENSEAAHAKHAELL
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHH
GYGSAEGALVFMSGWMGVDLARYGLDEPIGNVDSNAILSAVAAFQAATADGREWKVRDIA
CCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHH
EWGEIGGMGPRIVGSGTEVADTLQEWVEETDVDGFNLAYAITPGTFEDFIEYVVPVLTER
HHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
GAYQSSYTPGTLRHKLLGHGDRLPEEHRGAKYRIGGPLSTIIDRPSTVPSSSGSTAPAPT
CCCCCCCCCHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCC
PGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]