| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is serB [H]
Identifier: 169630469
GI number: 169630469
Start: 3437615
End: 3438850
Strand: Reverse
Name: serB [H]
Synonym: MAB_3388c
Alternate gene names: 169630469
Gene position: 3438850-3437615 (Counterclockwise)
Preceding gene: 169630470
Following gene: 169630467
Centisome position: 67.87
GC content: 66.5
Gene sequence:
>1236_bases GTGAATAACCGCGTCACGGTTCTTGTCACCGTCACCGGGGCCGACAAGCCCGGCGTCACCTCGGTACTCATGGGGGTGTT GTCCCGCCATGGCGTCGACCTGCTGAACGTCGAACAGGTTGTCATTCGCGGCAAGCTGACCCTCGGTGTGCTGGTGAAGG CGCAGGGCCGCAGCGATGCGGTCGAAGCGCTACAGGACGAGCTCGAAGAGGCCATGCACACCCTCGGGTTCGACGTCGAC GTCGAATTCGGCGGGGACAGTTCGGTGATCAAGGATCCGTCGACGCACACCATTGTGGTGCTGGGGCGGCCAGTGACCGC CCGCGCGTTCGGTGCTGTGGCCCGCGAGCTCGCCGCGCTGGGGATCAATATCGACCTGATCCGTGGCATCGCCGACTACC CGGTCACGGGCCTGGAGCTGCGGGTCACCGTGCCGCAGAACCGGCTGACCGATGTCGATCTGCACACGGCCATGGCGCAG GTGGCGACCGACGAGCCGGTGGACATCGCCGTCGAGCACAGCAGCCTGGACCGACGGGCCAAGCGGCTCATCGTGTTCGA CGTGGACTCGACCCTGATCCAGGGTGAGGTCATCGAGATGCTGGCCGATCGGGCCGGGGCACGGGAGCAGGTCGCTGCCA TCACCGAGGCTGCCATGCGCGGCGAGCTGGACTTCGCCCAGTCGCTACATCAGCGCGTGGCCACGCTGGCCGGTCTGCCC GAGTCGGTGCTCGAGGATGTCGCCGATGAATTGGTACTCACTCCAGGTGCCCGCACCACCATCCGGACCCTGCGTCGGCT GGGGTACTCGTGCGGCGTGGTTTCGGGTGGATTCCGCCAGGTGATCGACCCCCTGGCCCACGAACTGGCCCTGGATTTCG TGGCGGCCAACGTTCTGGAGATCGTGGACGGCAAGCTCACCGGAAGGGTGATCGGGGAGGTCGTGGACCGTCCCGGTAAG GCCAAGGCGTTGCGGCAATTCGCGTATGAGGCCGGTGTCCCGCTGGCGCAGACCGTGGCCGTCGGTGATGGTGCGAACGA TATCGACATGCTGTCGGCCGCTGGTCTCGGCGTGGCTTTCAACGCCAAACCGGCGTTGCGCAAGGTGGCCGATGCCTCGG TCAGCCAGCCGTATCTGGATGTGGTGCTGTTCATCCTGGGCATCACCCGGGCCGAGATCGAGGCGGCCGACGCCGTCGAT GGCGGTGTGCGCCGCGTCGACATTCCCGACGACTGA
Upstream 100 bases:
>100_bases AGCGCCCGGCGTTCGAGCTGCACTACCCGCACATGTCTGAGCGCATGCGCGCCGAGGCACACGTGGGTGGCGGCCACTAA TAAGGCCGCGACACTCTGTT
Downstream 100 bases:
>100_bases CCTTTCCTGGCGCGAGCATGCCCAAATGTGCCCAAATATGCGGTATTTAGGCACATTTGGGCATGCTCGCGGTGCGGTGC GGTGCGGTGCGCGGACGTCA
Product: phosphoserine phosphatase (SerB2)
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MNNRVTVLVTVTGADKPGVTSVLMGVLSRHGVDLLNVEQVVIRGKLTLGVLVKAQGRSDAVEALQDELEEAMHTLGFDVD VEFGGDSSVIKDPSTHTIVVLGRPVTARAFGAVARELAALGINIDLIRGIADYPVTGLELRVTVPQNRLTDVDLHTAMAQ VATDEPVDIAVEHSSLDRRAKRLIVFDVDSTLIQGEVIEMLADRAGAREQVAAITEAAMRGELDFAQSLHQRVATLAGLP ESVLEDVADELVLTPGARTTIRTLRRLGYSCGVVSGGFRQVIDPLAHELALDFVAANVLEIVDGKLTGRVIGEVVDRPGK AKALRQFAYEAGVPLAQTVAVGDGANDIDMLSAAGLGVAFNAKPALRKVADASVSQPYLDVVLFILGITRAEIEAADAVD GGVRRVDIPDD
Sequences:
>Translated_411_residues MNNRVTVLVTVTGADKPGVTSVLMGVLSRHGVDLLNVEQVVIRGKLTLGVLVKAQGRSDAVEALQDELEEAMHTLGFDVD VEFGGDSSVIKDPSTHTIVVLGRPVTARAFGAVARELAALGINIDLIRGIADYPVTGLELRVTVPQNRLTDVDLHTAMAQ VATDEPVDIAVEHSSLDRRAKRLIVFDVDSTLIQGEVIEMLADRAGAREQVAAITEAAMRGELDFAQSLHQRVATLAGLP ESVLEDVADELVLTPGARTTIRTLRRLGYSCGVVSGGFRQVIDPLAHELALDFVAANVLEIVDGKLTGRVIGEVVDRPGK AKALRQFAYEAGVPLAQTVAVGDGANDIDMLSAAGLGVAFNAKPALRKVADASVSQPYLDVVLFILGITRAEIEAADAVD GGVRRVDIPDD >Mature_411_residues MNNRVTVLVTVTGADKPGVTSVLMGVLSRHGVDLLNVEQVVIRGKLTLGVLVKAQGRSDAVEALQDELEEAMHTLGFDVD VEFGGDSSVIKDPSTHTIVVLGRPVTARAFGAVARELAALGINIDLIRGIADYPVTGLELRVTVPQNRLTDVDLHTAMAQ VATDEPVDIAVEHSSLDRRAKRLIVFDVDSTLIQGEVIEMLADRAGAREQVAAITEAAMRGELDFAQSLHQRVATLAGLP ESVLEDVADELVLTPGARTTIRTLRRLGYSCGVVSGGFRQVIDPLAHELALDFVAANVLEIVDGKLTGRVIGEVVDRPGK AKALRQFAYEAGVPLAQTVAVGDGANDIDMLSAAGLGVAFNAKPALRKVADASVSQPYLDVVLFILGITRAEIEAADAVD GGVRRVDIPDD
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1790849, Length=208, Percent_Identity=48.5576923076923, Blast_Score=179, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6321647, Length=250, Percent_Identity=40, Blast_Score=181, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 43519; Mature: 43519
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRVTVLVTVTGADKPGVTSVLMGVLSRHGVDLLNVEQVVIRGKLTLGVLVKAQGRSDA CCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEEECCCHHH VEALQDELEEAMHTLGFDVDVEFGGDSSVIKDPSTHTIVVLGRPVTARAFGAVARELAAL HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH GINIDLIRGIADYPVTGLELRVTVPQNRLTDVDLHTAMAQVATDEPVDIAVEHSSLDRRA CCCHHHHHCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHC KRLIVFDVDSTLIQGEVIEMLADRAGAREQVAAITEAAMRGELDFAQSLHQRVATLAGLP CEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC ESVLEDVADELVLTPGARTTIRTLRRLGYSCGVVSGGFRQVIDPLAHELALDFVAANVLE HHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVDGKLTGRVIGEVVDRPGKAKALRQFAYEAGVPLAQTVAVGDGANDIDMLSAAGLGVAF HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCCEEE NAKPALRKVADASVSQPYLDVVLFILGITRAEIEAADAVDGGVRRVDIPDD CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC >Mature Secondary Structure MNNRVTVLVTVTGADKPGVTSVLMGVLSRHGVDLLNVEQVVIRGKLTLGVLVKAQGRSDA CCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEEECCCHHH VEALQDELEEAMHTLGFDVDVEFGGDSSVIKDPSTHTIVVLGRPVTARAFGAVARELAAL HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH GINIDLIRGIADYPVTGLELRVTVPQNRLTDVDLHTAMAQVATDEPVDIAVEHSSLDRRA CCCHHHHHCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHC KRLIVFDVDSTLIQGEVIEMLADRAGAREQVAAITEAAMRGELDFAQSLHQRVATLAGLP CEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC ESVLEDVADELVLTPGARTTIRTLRRLGYSCGVVSGGFRQVIDPLAHELALDFVAANVLE HHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVDGKLTGRVIGEVVDRPGKAKALRQFAYEAGVPLAQTVAVGDGANDIDMLSAAGLGVAF HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCCEEE NAKPALRKVADASVSQPYLDVVLFILGITRAEIEAADAVDGGVRRVDIPDD CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA