| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630446
Identifier: 169630446
GI number: 169630446
Start: 3415224
End: 3416786
Strand: Direct
Name: 169630446
Synonym: MAB_3365
Alternate gene names: NA
Gene position: 3415224-3416786 (Clockwise)
Preceding gene: 169630445
Following gene: 169630447
Centisome position: 67.4
GC content: 65.9
Gene sequence:
>1563_bases GTGACGCCATCCAAGAAGCCCGTTCCAGGCCTTTTCACCATGGTGCTACATACACACCTGCCGTGGCTGGCCAACCATGG GCGCTGGCCGGTCGGCGAGGAGTGGCTATACCAGTCTTGGTCCGCCGCATACCTGCCGCTGTTCAAGGTGTTGCGCACAC TGGCCGCCGAGGGCCGGGAGAACCTGCTCACGCTGGGCATCACCCCCGTGGTGGCCGCGCAGCTAGACGATCCGCACTGC TTGACCGGGCTGCACAGCTGGCTCGCCAACTGGCAGCTGCGTGCATTCGAGGCTTCCACAATCAGCAGCACCGATGCCGA ACCAGGCACCGCGTCGAGCCCGGAAATGTTGCGAGCGTTCGGAGTTCGCGAGTATCAGACTGCTACCGCTGCCCTCGATG AGTTCGACACGTACTGGCGTCACGGCGGCAGCGGGCCGCTGCGCAACCTGATCGATGCCAAAGCCATCGAACTGCTGGGC GGCCCACTGGCTCATCCGTTCCAGCCGCTGTTGCACCCGCGCCTGCGCGAGTTCGCACTGCGCGAAGGATTGGCAGATGC CGCACAGCGTTTCGGGCATGCACCCACCGGTATTTGGGCGCCCGAGTGCGCCTACGCCCCGGGTATGGAAGAGGGCTACG CGGCGGCAGGCGTCAAGCACTTCATGGTGGATGGTCCGTCCCTACAGGGAGACACGTCCCTGGGCCGCACGGTGGGCGAC TCCGACGTGGTTGCCTTCGGCCGCGACCTGGCGGTGAGCTACCGCGTGTGGTCCCCGAAGTCCGGATATCCGGGCCATGC CGCCTACCGCGACTTCCACACCTATGACCATGACACCGGACTCAAGCCGGCCCGTGTCACCGGACGCAATGTGCCATCGG AATCCAAGGCACCCTATGACCCCGAGCGCGCCAATGCCGCGATCGACATCCATGTCCGCGATTTCGTGGACACCGTCCGC CAGCGTCTCGTCGACGAATCCAGCCGCATCGGGCGGCCCGCGCACGTCATCGCCGCCTTCGACACCGAGCTCTATGGACA CTGGTGGTACGAAGGGCCCACCTGGCTAGAACGGGTGCTGCGCGCGCTACCCGAAGCCGGTATTCAGGTGGGCACGCTGG AGCAGGCCCGCGAGCAGGGATATGTGGGCGAGCCGTTCGACTTGCCCGCCAGTTCATGGGGCTCCGGCAAGGATTGGCAT GTGTGGAACGGCGAGAAGGTAGCCGACCTGGTGCAGTTGAACACCGAGGTCGTCGACACCGCGCTCACCGCGGTGGACAA GGCTCTCAACGAGCAACCCGCGCCGCATACCCGCAACCGGGTGGCCGATCAGATATTGCGCGAAGCGCTGTTGACCGTGT CCAGCGACTGGCCGTTCATGGTCAGCAAGGATTCGGCGGCCGACTACGCGCGCTACCGCGCGCACCTGCACGCACACGCC ACCCGCGAGATTGCCGGCGCCCTGGCCAGCGGACGTCACGACGTGGCATCTCGATTGGCGGACGGTTGGAATCGCGCGGA CGGATTGTTCGGCGCGCTTGATGCCCGGAGGCTGCCCCGATGA
Upstream 100 bases:
>100_bases CGGACATCACCGGTCTGACCACCGAGGATTTCGAAATTGTCGACGCCGGTGAGCGCGATATCGACGCGAGCCTGGACCTG GTTGCCATTGCGGTGATTCC
Downstream 100 bases:
>100_bases ACATGGCCCTTGCCCGAGAGGCTCATCTCAACACGGTCTTCGCCCGAGAGGCTCATCTCAACACGGTCTTCGCCCGAGAG GCTCATCTCAACACGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MTPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRENLLTLGITPVVAAQLDDPHC LTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAFGVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLG GPLAHPFQPLLHPRLREFALREGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYDPERANAAIDIHVRDFVDTVR QRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVLRALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWH VWNGEKVADLVQLNTEVVDTALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR
Sequences:
>Translated_520_residues MTPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRENLLTLGITPVVAAQLDDPHC LTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAFGVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLG GPLAHPFQPLLHPRLREFALREGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYDPERANAAIDIHVRDFVDTVR QRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVLRALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWH VWNGEKVADLVQLNTEVVDTALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR >Mature_519_residues TPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRENLLTLGITPVVAAQLDDPHCL TGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAFGVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLGG PLAHPFQPLLHPRLREFALREGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGDS DVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYDPERANAAIDIHVRDFVDTVRQ RLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVLRALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWHV WNGEKVADLVQLNTEVVDTALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHAT REIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57326; Mature: 57195
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRE CCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC NLLTLGITPVVAAQLDDPHCLTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAF CEEEECCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH GVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLGGPLAHPFQPLLHPRLREFAL CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH REGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHEEECCCCCCCCCHHCCCCCC SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYD CHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PERANAAIDIHVRDFVDTVRQRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVL HHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCEEEECCCHHHHHHHH RALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWHVWNGEKVADLVQLNTEVVDT HHHHHCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH ALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR HHHHHHHHHCCHHHHHHHHHHCCCHHCCHHHHHHHHCCCC >Mature Secondary Structure TPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRE CCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC NLLTLGITPVVAAQLDDPHCLTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAF CEEEECCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH GVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLGGPLAHPFQPLLHPRLREFAL CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH REGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHEEECCCCCCCCCHHCCCCCC SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYD CHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PERANAAIDIHVRDFVDTVRQRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVL HHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCEEEECCCHHHHHHHH RALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWHVWNGEKVADLVQLNTEVVDT HHHHHCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH ALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR HHHHHHHHHCCHHHHHHHHHHCCCHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA