The gene/protein map for NC_010397 is currently unavailable.
Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169630446

Identifier: 169630446

GI number: 169630446

Start: 3415224

End: 3416786

Strand: Direct

Name: 169630446

Synonym: MAB_3365

Alternate gene names: NA

Gene position: 3415224-3416786 (Clockwise)

Preceding gene: 169630445

Following gene: 169630447

Centisome position: 67.4

GC content: 65.9

Gene sequence:

>1563_bases
GTGACGCCATCCAAGAAGCCCGTTCCAGGCCTTTTCACCATGGTGCTACATACACACCTGCCGTGGCTGGCCAACCATGG
GCGCTGGCCGGTCGGCGAGGAGTGGCTATACCAGTCTTGGTCCGCCGCATACCTGCCGCTGTTCAAGGTGTTGCGCACAC
TGGCCGCCGAGGGCCGGGAGAACCTGCTCACGCTGGGCATCACCCCCGTGGTGGCCGCGCAGCTAGACGATCCGCACTGC
TTGACCGGGCTGCACAGCTGGCTCGCCAACTGGCAGCTGCGTGCATTCGAGGCTTCCACAATCAGCAGCACCGATGCCGA
ACCAGGCACCGCGTCGAGCCCGGAAATGTTGCGAGCGTTCGGAGTTCGCGAGTATCAGACTGCTACCGCTGCCCTCGATG
AGTTCGACACGTACTGGCGTCACGGCGGCAGCGGGCCGCTGCGCAACCTGATCGATGCCAAAGCCATCGAACTGCTGGGC
GGCCCACTGGCTCATCCGTTCCAGCCGCTGTTGCACCCGCGCCTGCGCGAGTTCGCACTGCGCGAAGGATTGGCAGATGC
CGCACAGCGTTTCGGGCATGCACCCACCGGTATTTGGGCGCCCGAGTGCGCCTACGCCCCGGGTATGGAAGAGGGCTACG
CGGCGGCAGGCGTCAAGCACTTCATGGTGGATGGTCCGTCCCTACAGGGAGACACGTCCCTGGGCCGCACGGTGGGCGAC
TCCGACGTGGTTGCCTTCGGCCGCGACCTGGCGGTGAGCTACCGCGTGTGGTCCCCGAAGTCCGGATATCCGGGCCATGC
CGCCTACCGCGACTTCCACACCTATGACCATGACACCGGACTCAAGCCGGCCCGTGTCACCGGACGCAATGTGCCATCGG
AATCCAAGGCACCCTATGACCCCGAGCGCGCCAATGCCGCGATCGACATCCATGTCCGCGATTTCGTGGACACCGTCCGC
CAGCGTCTCGTCGACGAATCCAGCCGCATCGGGCGGCCCGCGCACGTCATCGCCGCCTTCGACACCGAGCTCTATGGACA
CTGGTGGTACGAAGGGCCCACCTGGCTAGAACGGGTGCTGCGCGCGCTACCCGAAGCCGGTATTCAGGTGGGCACGCTGG
AGCAGGCCCGCGAGCAGGGATATGTGGGCGAGCCGTTCGACTTGCCCGCCAGTTCATGGGGCTCCGGCAAGGATTGGCAT
GTGTGGAACGGCGAGAAGGTAGCCGACCTGGTGCAGTTGAACACCGAGGTCGTCGACACCGCGCTCACCGCGGTGGACAA
GGCTCTCAACGAGCAACCCGCGCCGCATACCCGCAACCGGGTGGCCGATCAGATATTGCGCGAAGCGCTGTTGACCGTGT
CCAGCGACTGGCCGTTCATGGTCAGCAAGGATTCGGCGGCCGACTACGCGCGCTACCGCGCGCACCTGCACGCACACGCC
ACCCGCGAGATTGCCGGCGCCCTGGCCAGCGGACGTCACGACGTGGCATCTCGATTGGCGGACGGTTGGAATCGCGCGGA
CGGATTGTTCGGCGCGCTTGATGCCCGGAGGCTGCCCCGATGA

Upstream 100 bases:

>100_bases
CGGACATCACCGGTCTGACCACCGAGGATTTCGAAATTGTCGACGCCGGTGAGCGCGATATCGACGCGAGCCTGGACCTG
GTTGCCATTGCGGTGATTCC

Downstream 100 bases:

>100_bases
ACATGGCCCTTGCCCGAGAGGCTCATCTCAACACGGTCTTCGCCCGAGAGGCTCATCTCAACACGGTCTTCGCCCGAGAG
GCTCATCTCAACACGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRENLLTLGITPVVAAQLDDPHC
LTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAFGVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLG
GPLAHPFQPLLHPRLREFALREGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD
SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYDPERANAAIDIHVRDFVDTVR
QRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVLRALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWH
VWNGEKVADLVQLNTEVVDTALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA
TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR

Sequences:

>Translated_520_residues
MTPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRENLLTLGITPVVAAQLDDPHC
LTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAFGVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLG
GPLAHPFQPLLHPRLREFALREGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD
SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYDPERANAAIDIHVRDFVDTVR
QRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVLRALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWH
VWNGEKVADLVQLNTEVVDTALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA
TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR
>Mature_519_residues
TPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRENLLTLGITPVVAAQLDDPHCL
TGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAFGVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLGG
PLAHPFQPLLHPRLREFALREGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGDS
DVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYDPERANAAIDIHVRDFVDTVRQ
RLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVLRALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWHV
WNGEKVADLVQLNTEVVDTALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHAT
REIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57326; Mature: 57195

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRE
CCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC
NLLTLGITPVVAAQLDDPHCLTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAF
CEEEECCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
GVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLGGPLAHPFQPLLHPRLREFAL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
REGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHEEECCCCCCCCCHHCCCCCC
SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYD
CHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PERANAAIDIHVRDFVDTVRQRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVL
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCEEEECCCHHHHHHHH
RALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWHVWNGEKVADLVQLNTEVVDT
HHHHHCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
ALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR
HHHHHHHHHCCHHHHHHHHHHCCCHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
TPSKKPVPGLFTMVLHTHLPWLANHGRWPVGEEWLYQSWSAAYLPLFKVLRTLAAEGRE
CCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC
NLLTLGITPVVAAQLDDPHCLTGLHSWLANWQLRAFEASTISSTDAEPGTASSPEMLRAF
CEEEECCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
GVREYQTATAALDEFDTYWRHGGSGPLRNLIDAKAIELLGGPLAHPFQPLLHPRLREFAL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
REGLADAAQRFGHAPTGIWAPECAYAPGMEEGYAAAGVKHFMVDGPSLQGDTSLGRTVGD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHEEECCCCCCCCCHHCCCCCC
SDVVAFGRDLAVSYRVWSPKSGYPGHAAYRDFHTYDHDTGLKPARVTGRNVPSESKAPYD
CHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PERANAAIDIHVRDFVDTVRQRLVDESSRIGRPAHVIAAFDTELYGHWWYEGPTWLERVL
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCEEEECCCHHHHHHHH
RALPEAGIQVGTLEQAREQGYVGEPFDLPASSWGSGKDWHVWNGEKVADLVQLNTEVVDT
HHHHHCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
ALTAVDKALNEQPAPHTRNRVADQILREALLTVSSDWPFMVSKDSAADYARYRAHLHAHA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
TREIAGALASGRHDVASRLADGWNRADGLFGALDARRLPR
HHHHHHHHHCCHHHHHHHHHHCCCHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA