| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630442
Identifier: 169630442
GI number: 169630442
Start: 3409576
End: 3412245
Strand: Direct
Name: 169630442
Synonym: MAB_3361
Alternate gene names: NA
Gene position: 3409576-3412245 (Clockwise)
Preceding gene: 169630436
Following gene: 169630445
Centisome position: 67.29
GC content: 67.83
Gene sequence:
>2670_bases GTGCTGCGCGGCCAAGCTGGTGTCGGCAAGACGGCGCTGTTGCGGTACGTGCTGGGGAAAGCATCGGGGCAACTGATCGC CCAGGCCTCCGGCATTCAATCGGAGATGGAGCTGGCCTTCGCGGGATTACAACAGTTCTGCGCGCCCCTGACGAAGTACT CCGGGGCGATACCCGACCCGCAGCGTGAGGCACTCACCATCGCGTTCGGAACCCGTAGCGGCCCCCCGCCCGATCGCTTT CTGATCGGATTGGCGGTGCTGAGCCTGCTGGCAGCGGCCGCCGAGCATCAGCCCGTGCTGTGCGTGATCGACGACGCACA ATGGCTTGACCGGGTCTCCCTGCAGACCCTGGCCTTTGTCACCCGGCGCCTGGGCAGTGAACCGGTCGCCATGCTGTTCG CGGTACGTGACGGCACCGATAGCGAACTCGCCGGGCTGCCCGAACTCACCGTGCACGGCCTGCGCGCGGCCGACGCCGGC ACGCTGCTGGACTCGGTCATCCCAGGGCTCCTCGATGAACGTGTTCGCGACCGCATCGTGGCCGAGACGCAAGGCAACCC GCTGGCACTGCTGGAACTGCCCCGGGACATGACCGCCGAAGAGCTGGCCGGCGGTTTCGGGTGGCCGGACGGCGGTCGGC TGGCGGGGCAGATCGAGCAGACGTTCCTCCGGCGAGTCCAACAGCTTCCCGCGCACACCCAAACACTATTGCTGGCCGCG GCAACCGATCCGCTCGGCGACGTGACGTTGTTGGCGCGCGCCGCCCAACAGCTCGGAATTCCGATGCATGCGATCGCACC CGCCGAGGCGGCCGATCTTGTGGAGCTGAGCACCCGGGTGCGCTTCCGCCATCCGTTGGTGCGTTCGGCTGTCTACATCA GCGCAAATCCCTTGGAACGCAGAAGAATTCATGGCGTCCTGGCCGGCGCCACGGACCCGGGCGCCGATCCCGATCGTCGG GCATGGCACCGCGCGCATGCGGCCGCGGGTACCGATGAGGCCATCGCGTGGGAGTTGGAGCAGTCCGCCGGCCGCGCTCA GGCCAAGGGCGGCGTCTTGGCTGCTGCCGCGTTCCTACAGCGCGCGACCGAACTCACCGCGGATCCGGCGGCGCGGGGCC GGCGGGCGCTGGCCGCCGCCCAGTCGAAATACGACGCGGCCGCCTTTGACGCCGCCCGCGAGCTGCTCGGCGTTGCGGAC ATGACCCCGCTGGATCCGTTGGCACGAGCCCGTGCGACACGACTGCGCGCGAAGATCGCATTCGCCGAAAGCCGGGTGGG CGCTTTCGGTTCCGTCACCGTGTCCGAAGCCGCAATCGGCCTGGTGGAGGCTGCTAGATGCCTGGAAAACCTCGATGACA ACCTGGCCCGGGAAACCTACCTGGACGCGGTGGGCGCCGCCATGTACGGCGGCCGGCTGTGCCCCCGTGGAGGCGCCGTA GAGGTGGCCGAACCGGCCCGTCTGGCGCCCGCCGGGGCGCAGCCCGCAAGACCCTCGGACCTGCTACTCGACGGCCTTGC CCGGCGAATCACGCATGGCGCCGCGGCGAGTGCGCAGACACTGGGCGAAGCGCTCACACTCATCCGCTGTGAAGCCGACC GTCCGGCGAACACCAGCTGGATGGAGCAGGCGTTTCCCATCGCCCTCGAATCCGCCACCCATGAAGTGTGGGACGACGAC ATGTGGCATCACCTCGCCACGCGTGCGGTCCATATCGCCCGTGAAGTCGGCGCCCTCTCGCTGCTGCCGGCAGCTCTCAT CTATCGCGCGGGTATGCACGTGCACGCCGGCGAGCTCGACGCCGCGGCCGAACTGGTCCAGGAGGCCGACGCCATCTCGG CCGCGACAGGCCACGCACCCATCAGGTACCACTCCTTGATCCTGGCGGCCTGGCGCGGTAGCGAGCCCACGGCTATTCGG CTGATCGATGAGGCCATGCGCGATGGGGCGGCCCGAGGCGAGGGCAGACTGCTCGGCGCGATGGGCTACGCGGCCGGGGT GCTCAACAACAGCCTCGGCCGCTACGAGCTCGCCTTTATGGCGGCACGAAGAGCTTGTGAGCATGAGGATCTCGGGTTAT ACAGCTGGTGCCTGATCGAATTGATCGAGGCGGCCGTGCGCTGCGGCGAGCACGACACCGCGGTGAAGGCATTCGGCCAA CTCGAAGAGCGCGCATTGGCCGCACAAAGCGACTGGTCTCAGGGGATGGTGGCACGCTCCCGTGCACTGATCACCGTCGG CCATGACGCCGAGCCCCACTACCGGGAGGCGATCCAGCGACTCACCAACACGAGGATTTCCGCCCACCTCGCCCGTGCCC ACCTGATTTACGGCGAGTGGTTGCGCCGTTGCAATCGACGCTCGGACGCCCGCACGGAACTCACAGCGGCACACGGAAGT TTCGTCAACATGGGCACGGCGGCCTTCGCCGAACGCGCCGAACGCGAGCTTCGCGCCACCGGCGCGAAGGTCCGGAAGCG TTCTGCCAGTTCAGAAAAGGCGCTGACAGCGCAAGAGGCGCAGATCGCCCGAATGGCAGGCCAGGGCTTGACCAATCAGG AGATCGCCGCCCAGCTGTTCATCAGCTCGCACACTGTGGAGTGGCATCTGCGGAAAGTATTCGCCAAGCGCGGCATCACC TCTCGCAGGCAACTGCGCAGTGGCCGCTAG
Upstream 100 bases:
>100_bases CAACAGCTATCCGGAATCGCGTCTGTGCGGTCGAACCCAAGAATGCTCGGCGCTGGACCGCCTGATGACGGCCTCCCGCT CAGGGCCCAGCCAGGTTCTC
Downstream 100 bases:
>100_bases GCCCCGGCGACCACAGAAATCCCCATGAACGCCGAAAGGACTATCCAGCGCCCTCGACGCGGTGGTCTGGGGCTCTGGAT AGTCCAGTGGCGTAACGTCA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Regulatory Protein LuxR; ATPase-Like Protein; Transcriptional Regulatory Protein; Regulatory Protein; Transcriptional Activator; Response Regulator Receiver Protein; Transcriptional Regulator Luxr Family; LuxR Family ATP-Dependent Transcriptional Regulator; FAD Linked Oxidase Domain-Containing Protein; Luxr Family Transcriptional Regulator
Number of amino acids: Translated: 889; Mature: 889
Protein sequence:
>889_residues MLRGQAGVGKTALLRYVLGKASGQLIAQASGIQSEMELAFAGLQQFCAPLTKYSGAIPDPQREALTIAFGTRSGPPPDRF LIGLAVLSLLAAAAEHQPVLCVIDDAQWLDRVSLQTLAFVTRRLGSEPVAMLFAVRDGTDSELAGLPELTVHGLRAADAG TLLDSVIPGLLDERVRDRIVAETQGNPLALLELPRDMTAEELAGGFGWPDGGRLAGQIEQTFLRRVQQLPAHTQTLLLAA ATDPLGDVTLLARAAQQLGIPMHAIAPAEAADLVELSTRVRFRHPLVRSAVYISANPLERRRIHGVLAGATDPGADPDRR AWHRAHAAAGTDEAIAWELEQSAGRAQAKGGVLAAAAFLQRATELTADPAARGRRALAAAQSKYDAAAFDAARELLGVAD MTPLDPLARARATRLRAKIAFAESRVGAFGSVTVSEAAIGLVEAARCLENLDDNLARETYLDAVGAAMYGGRLCPRGGAV EVAEPARLAPAGAQPARPSDLLLDGLARRITHGAAASAQTLGEALTLIRCEADRPANTSWMEQAFPIALESATHEVWDDD MWHHLATRAVHIAREVGALSLLPAALIYRAGMHVHAGELDAAAELVQEADAISAATGHAPIRYHSLILAAWRGSEPTAIR LIDEAMRDGAARGEGRLLGAMGYAAGVLNNSLGRYELAFMAARRACEHEDLGLYSWCLIELIEAAVRCGEHDTAVKAFGQ LEERALAAQSDWSQGMVARSRALITVGHDAEPHYREAIQRLTNTRISAHLARAHLIYGEWLRRCNRRSDARTELTAAHGS FVNMGTAAFAERAERELRATGAKVRKRSASSEKALTAQEAQIARMAGQGLTNQEIAAQLFISSHTVEWHLRKVFAKRGIT SRRQLRSGR
Sequences:
>Translated_889_residues MLRGQAGVGKTALLRYVLGKASGQLIAQASGIQSEMELAFAGLQQFCAPLTKYSGAIPDPQREALTIAFGTRSGPPPDRF LIGLAVLSLLAAAAEHQPVLCVIDDAQWLDRVSLQTLAFVTRRLGSEPVAMLFAVRDGTDSELAGLPELTVHGLRAADAG TLLDSVIPGLLDERVRDRIVAETQGNPLALLELPRDMTAEELAGGFGWPDGGRLAGQIEQTFLRRVQQLPAHTQTLLLAA ATDPLGDVTLLARAAQQLGIPMHAIAPAEAADLVELSTRVRFRHPLVRSAVYISANPLERRRIHGVLAGATDPGADPDRR AWHRAHAAAGTDEAIAWELEQSAGRAQAKGGVLAAAAFLQRATELTADPAARGRRALAAAQSKYDAAAFDAARELLGVAD MTPLDPLARARATRLRAKIAFAESRVGAFGSVTVSEAAIGLVEAARCLENLDDNLARETYLDAVGAAMYGGRLCPRGGAV EVAEPARLAPAGAQPARPSDLLLDGLARRITHGAAASAQTLGEALTLIRCEADRPANTSWMEQAFPIALESATHEVWDDD MWHHLATRAVHIAREVGALSLLPAALIYRAGMHVHAGELDAAAELVQEADAISAATGHAPIRYHSLILAAWRGSEPTAIR LIDEAMRDGAARGEGRLLGAMGYAAGVLNNSLGRYELAFMAARRACEHEDLGLYSWCLIELIEAAVRCGEHDTAVKAFGQ LEERALAAQSDWSQGMVARSRALITVGHDAEPHYREAIQRLTNTRISAHLARAHLIYGEWLRRCNRRSDARTELTAAHGS FVNMGTAAFAERAERELRATGAKVRKRSASSEKALTAQEAQIARMAGQGLTNQEIAAQLFISSHTVEWHLRKVFAKRGIT SRRQLRSGR >Mature_889_residues MLRGQAGVGKTALLRYVLGKASGQLIAQASGIQSEMELAFAGLQQFCAPLTKYSGAIPDPQREALTIAFGTRSGPPPDRF LIGLAVLSLLAAAAEHQPVLCVIDDAQWLDRVSLQTLAFVTRRLGSEPVAMLFAVRDGTDSELAGLPELTVHGLRAADAG TLLDSVIPGLLDERVRDRIVAETQGNPLALLELPRDMTAEELAGGFGWPDGGRLAGQIEQTFLRRVQQLPAHTQTLLLAA ATDPLGDVTLLARAAQQLGIPMHAIAPAEAADLVELSTRVRFRHPLVRSAVYISANPLERRRIHGVLAGATDPGADPDRR AWHRAHAAAGTDEAIAWELEQSAGRAQAKGGVLAAAAFLQRATELTADPAARGRRALAAAQSKYDAAAFDAARELLGVAD MTPLDPLARARATRLRAKIAFAESRVGAFGSVTVSEAAIGLVEAARCLENLDDNLARETYLDAVGAAMYGGRLCPRGGAV EVAEPARLAPAGAQPARPSDLLLDGLARRITHGAAASAQTLGEALTLIRCEADRPANTSWMEQAFPIALESATHEVWDDD MWHHLATRAVHIAREVGALSLLPAALIYRAGMHVHAGELDAAAELVQEADAISAATGHAPIRYHSLILAAWRGSEPTAIR LIDEAMRDGAARGEGRLLGAMGYAAGVLNNSLGRYELAFMAARRACEHEDLGLYSWCLIELIEAAVRCGEHDTAVKAFGQ LEERALAAQSDWSQGMVARSRALITVGHDAEPHYREAIQRLTNTRISAHLARAHLIYGEWLRRCNRRSDARTELTAAHGS FVNMGTAAFAERAERELRATGAKVRKRSASSEKALTAQEAQIARMAGQGLTNQEIAAQLFISSHTVEWHLRKVFAKRGIT SRRQLRSGR
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95215; Mature: 95215
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGQAGVGKTALLRYVLGKASGQLIAQASGIQSEMELAFAGLQQFCAPLTKYSGAIPDP CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC QREALTIAFGTRSGPPPDRFLIGLAVLSLLAAAAEHQPVLCVIDDAQWLDRVSLQTLAFV CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH TRRLGSEPVAMLFAVRDGTDSELAGLPELTVHGLRAADAGTLLDSVIPGLLDERVRDRIV HHHHCCCCEEEEEEECCCCCHHHCCCCHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHH AETQGNPLALLELPRDMTAEELAGGFGWPDGGRLAGQIEQTFLRRVQQLPAHTQTLLLAA HCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEEEEE ATDPLGDVTLLARAAQQLGIPMHAIAPAEAADLVELSTRVRFRHPLVRSAVYISANPLER CCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH RRIHGVLAGATDPGADPDRRAWHRAHAAAGTDEAIAWELEQSAGRAQAKGGVLAAAAFLQ HHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEHHHCCCHHHCCCHHHHHHHHH RATELTADPAARGRRALAAAQSKYDAAAFDAARELLGVADMTPLDPLARARATRLRAKIA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FAESRVGAFGSVTVSEAAIGLVEAARCLENLDDNLARETYLDAVGAAMYGGRLCPRGGAV HHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE EVAEPARLAPAGAQPARPSDLLLDGLARRITHGAAASAQTLGEALTLIRCEADRPANTSW ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCHH MEQAFPIALESATHEVWDDDMWHHLATRAVHIAREVGALSLLPAALIYRAGMHVHAGELD HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHH AAAELVQEADAISAATGHAPIRYHSLILAAWRGSEPTAIRLIDEAMRDGAARGEGRLLGA HHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEH MGYAAGVLNNSLGRYELAFMAARRACEHEDLGLYSWCLIELIEAAVRCGEHDTAVKAFGQ HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH LEERALAAQSDWSQGMVARSRALITVGHDAEPHYREAIQRLTNTRISAHLARAHLIYGEW HHHHHHHHHCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRCNRRSDARTELTAAHGSFVNMGTAAFAERAERELRATGAKVRKRSASSEKALTAQEA HHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QIARMAGQGLTNQEIAAQLFISSHTVEWHLRKVFAKRGITSRRQLRSGR HHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure MLRGQAGVGKTALLRYVLGKASGQLIAQASGIQSEMELAFAGLQQFCAPLTKYSGAIPDP CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC QREALTIAFGTRSGPPPDRFLIGLAVLSLLAAAAEHQPVLCVIDDAQWLDRVSLQTLAFV CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH TRRLGSEPVAMLFAVRDGTDSELAGLPELTVHGLRAADAGTLLDSVIPGLLDERVRDRIV HHHHCCCCEEEEEEECCCCCHHHCCCCHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHH AETQGNPLALLELPRDMTAEELAGGFGWPDGGRLAGQIEQTFLRRVQQLPAHTQTLLLAA HCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEEEEE ATDPLGDVTLLARAAQQLGIPMHAIAPAEAADLVELSTRVRFRHPLVRSAVYISANPLER CCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH RRIHGVLAGATDPGADPDRRAWHRAHAAAGTDEAIAWELEQSAGRAQAKGGVLAAAAFLQ HHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEHHHCCCHHHCCCHHHHHHHHH RATELTADPAARGRRALAAAQSKYDAAAFDAARELLGVADMTPLDPLARARATRLRAKIA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FAESRVGAFGSVTVSEAAIGLVEAARCLENLDDNLARETYLDAVGAAMYGGRLCPRGGAV HHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE EVAEPARLAPAGAQPARPSDLLLDGLARRITHGAAASAQTLGEALTLIRCEADRPANTSW ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCHH MEQAFPIALESATHEVWDDDMWHHLATRAVHIAREVGALSLLPAALIYRAGMHVHAGELD HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHH AAAELVQEADAISAATGHAPIRYHSLILAAWRGSEPTAIRLIDEAMRDGAARGEGRLLGA HHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEH MGYAAGVLNNSLGRYELAFMAARRACEHEDLGLYSWCLIELIEAAVRCGEHDTAVKAFGQ HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH LEERALAAQSDWSQGMVARSRALITVGHDAEPHYREAIQRLTNTRISAHLARAHLIYGEW HHHHHHHHHCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRCNRRSDARTELTAAHGSFVNMGTAAFAERAERELRATGAKVRKRSASSEKALTAQEA HHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QIARMAGQGLTNQEIAAQLFISSHTVEWHLRKVFAKRGITSRRQLRSGR HHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA