| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630386
Identifier: 169630386
GI number: 169630386
Start: 3344308
End: 3345090
Strand: Reverse
Name: 169630386
Synonym: MAB_3305c
Alternate gene names: NA
Gene position: 3345090-3344308 (Counterclockwise)
Preceding gene: 169630387
Following gene: 169630385
Centisome position: 66.01
GC content: 62.2
Gene sequence:
>783_bases GTGGCCGTGATGATCAGTCGGCGCGGGTGGCTTGTGGCAAGTGCAGTTGCCTTGTCGGGCCAGGCTATCCCCGCATGCTC TGCCCCCAAATCTGCGCACAAGGCGGAGGGCGGCGCCAGTGTTGTGGAGTTCGCCGGGAAGCTTCCGGATTCCGCGGAGT TGCGCAGACGATGTCGCGTAGTCGCGCTGCTCGACGCCTTGGTCGAGGGCCGAGCTCTCGCCAGGGACGATATCGGCACT GTCTACCAACCGAATTGGCGTTCCGGTGACGATCTTGTGAAGTACCAGAACGGGGGAGGCGACGAGTGGTCGATCGTCTT CTCGGCCACTGACGGTGTTTTCCTCCGGGGCTTCGACCATGAATCGGATTTGAGTACCTACAACGAGGACGATTACTGGC CGGGTCTGGTCGGTGATCTGCCGGAGCGGTTTAGGTCGGATCTGAAAAACCCCGATCTCTACGGCTACTACGACGGCGCT CCACAAATGACCGTTTGTGTCTGGCGCGGCCCCGCGGACGTCGCATGGCGCCACGGCAACCCGGAGCGCACGCAGTGGGG GTACCACGGCGATGGAGGTGAGCACTTATTCGATCCGCTGATCGACTGGCACGCATCCAAGGAACTGGACTGGTTGTACC CGGCGCAGGGCCATGTTGTACCCGAGTCCGCCGTGCAACAGGTCATGGACCGGAAGCCGCTCACCGACGAACTTATCCGC GCATTTCACCCCAATCCCGATATCACGGCACTACGCGCGGTGGCGACGCAGATCGGGTACTAG
Upstream 100 bases:
>100_bases CCCACCACAAGTGACGTTAGGGAGCCAGTCACCCACACTCTCCGGTTGGCGGCTGGCCCGGAGTGCTGGCTGTTTGCCTG AAGGCGGCTAGGCTGCACGT
Downstream 100 bases:
>100_bases ACCAGGTGTGATGTAAGCCTCCTGATGGTCCGCACTAGGCTGTGACGACGTGAGCGAACGTCCAGTCGTGTTGATTGCCG ACAAACTTGCCCCGTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAVMISRRGWLVASAVALSGQAIPACSAPKSAHKAEGGASVVEFAGKLPDSAELRRRCRVVALLDALVEGRALARDDIGT VYQPNWRSGDDLVKYQNGGGDEWSIVFSATDGVFLRGFDHESDLSTYNEDDYWPGLVGDLPERFRSDLKNPDLYGYYDGA PQMTVCVWRGPADVAWRHGNPERTQWGYHGDGGEHLFDPLIDWHASKELDWLYPAQGHVVPESAVQQVMDRKPLTDELIR AFHPNPDITALRAVATQIGY
Sequences:
>Translated_260_residues MAVMISRRGWLVASAVALSGQAIPACSAPKSAHKAEGGASVVEFAGKLPDSAELRRRCRVVALLDALVEGRALARDDIGT VYQPNWRSGDDLVKYQNGGGDEWSIVFSATDGVFLRGFDHESDLSTYNEDDYWPGLVGDLPERFRSDLKNPDLYGYYDGA PQMTVCVWRGPADVAWRHGNPERTQWGYHGDGGEHLFDPLIDWHASKELDWLYPAQGHVVPESAVQQVMDRKPLTDELIR AFHPNPDITALRAVATQIGY >Mature_259_residues AVMISRRGWLVASAVALSGQAIPACSAPKSAHKAEGGASVVEFAGKLPDSAELRRRCRVVALLDALVEGRALARDDIGTV YQPNWRSGDDLVKYQNGGGDEWSIVFSATDGVFLRGFDHESDLSTYNEDDYWPGLVGDLPERFRSDLKNPDLYGYYDGAP QMTVCVWRGPADVAWRHGNPERTQWGYHGDGGEHLFDPLIDWHASKELDWLYPAQGHVVPESAVQQVMDRKPLTDELIRA FHPNPDITALRAVATQIGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28765; Mature: 28634
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMISRRGWLVASAVALSGQAIPACSAPKSAHKAEGGASVVEFAGKLPDSAELRRRCRV CEEEEECCCCEEEHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH VALLDALVEGRALARDDIGTVYQPNWRSGDDLVKYQNGGGDEWSIVFSATDGVFLRGFDH HHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCEEEECCCC ESDLSTYNEDDYWPGLVGDLPERFRSDLKNPDLYGYYDGAPQMTVCVWRGPADVAWRHGN CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCEEEECCC PERTQWGYHGDGGEHLFDPLIDWHASKELDWLYPAQGHVVPESAVQQVMDRKPLTDELIR CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCHHHHHH AFHPNPDITALRAVATQIGY HHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AVMISRRGWLVASAVALSGQAIPACSAPKSAHKAEGGASVVEFAGKLPDSAELRRRCRV EEEEECCCCEEEHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH VALLDALVEGRALARDDIGTVYQPNWRSGDDLVKYQNGGGDEWSIVFSATDGVFLRGFDH HHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCEEEECCCC ESDLSTYNEDDYWPGLVGDLPERFRSDLKNPDLYGYYDGAPQMTVCVWRGPADVAWRHGN CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCEEEECCC PERTQWGYHGDGGEHLFDPLIDWHASKELDWLYPAQGHVVPESAVQQVMDRKPLTDELIR CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCHHHHHH AFHPNPDITALRAVATQIGY HHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA