| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630349
Identifier: 169630349
GI number: 169630349
Start: 3307211
End: 3307780
Strand: Reverse
Name: 169630349
Synonym: MAB_3268c
Alternate gene names: NA
Gene position: 3307780-3307211 (Counterclockwise)
Preceding gene: 169630350
Following gene: 169630348
Centisome position: 65.28
GC content: 62.81
Gene sequence:
>570_bases GTGACGCTCCGTCCCGCGACCGCCTGGTACGTCCTCGTTGCGGGGGTGGCCGGGCTAGCCGCGGCGCTGGCCCTCACCAT CGAGAAGATCGAGATCCTGATCGATCCGACGTACGTGCCGTCCTGCAGTCTGAATCCGGTCATTTCGTGTGGCTCGGTAA TGACGACCGAGCAGGCATCGGCCTTCGGTTTCCCTAATTCGCTCATCGGCATTGTGGCGTTCACGGTGGTGTTGGTGACC GGGGTGCTGTCGGTCGCGGGGGTGCAGCTGCCGCGCTGGTACTGGAGCGGGCTGGCGATCGGCAGCCTATTGGGTGCCGT CTTCGTCCACTGGTTGATCTTCCAGAGTCTGTACCGGATCGGCGCGCTGTGCCCCTATTGCATGGTGGTCTGGTCGGTCA CGATTCCGCTGTTGGTGGTCAGCGCTTCGATAGCGTTGCGGCCGTTGGGATCTCACCGCTGGGCTCGGATTCTGTACCAG TGGCGCTGGTCGCTGGTGGTGTTCTGGTTCGTCGCGCTGGTCCTCGCGATCCTCGAACGATTCTGGGATTACTGGATCAC ACTCGTCTGA
Upstream 100 bases:
>100_bases TCCGGATCAACGGTAAGGATTGGGAGATCGGCAAGGGCACCACGCCGGACGACTTGATCAAGGCCGTCACGGATATCACC GGACCTGTTCCGGGTCTGAA
Downstream 100 bases:
>100_bases ACCGAATTGTGAAATTGAGCGGACGCGCGTTCGCTCAATCCTCACGGTACGGTCAGTGACTATGTTCTCGAAGGTTCTTG TCGCCAACCGCGGTGAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Integral Membrane Oxidoreductase; Vitamin K Epoxide Reductase Family Protein; Conserved Membrane Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTLRPATAWYVLVAGVAGLAAALALTIEKIEILIDPTYVPSCSLNPVISCGSVMTTEQASAFGFPNSLIGIVAFTVVLVT GVLSVAGVQLPRWYWSGLAIGSLLGAVFVHWLIFQSLYRIGALCPYCMVVWSVTIPLLVVSASIALRPLGSHRWARILYQ WRWSLVVFWFVALVLAILERFWDYWITLV
Sequences:
>Translated_189_residues MTLRPATAWYVLVAGVAGLAAALALTIEKIEILIDPTYVPSCSLNPVISCGSVMTTEQASAFGFPNSLIGIVAFTVVLVT GVLSVAGVQLPRWYWSGLAIGSLLGAVFVHWLIFQSLYRIGALCPYCMVVWSVTIPLLVVSASIALRPLGSHRWARILYQ WRWSLVVFWFVALVLAILERFWDYWITLV >Mature_188_residues TLRPATAWYVLVAGVAGLAAALALTIEKIEILIDPTYVPSCSLNPVISCGSVMTTEQASAFGFPNSLIGIVAFTVVLVTG VLSVAGVQLPRWYWSGLAIGSLLGAVFVHWLIFQSLYRIGALCPYCMVVWSVTIPLLVVSASIALRPLGSHRWARILYQW RWSLVVFWFVALVLAILERFWDYWITLV
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20860; Mature: 20729
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRPATAWYVLVAGVAGLAAALALTIEKIEILIDPTYVPSCSLNPVISCGSVMTTEQAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHCCCCHHHHHHHH AFGFPNSLIGIVAFTVVLVTGVLSVAGVQLPRWYWSGLAIGSLLGAVFVHWLIFQSLYRI HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALCPYCMVVWSVTIPLLVVSASIALRPLGSHRWARILYQWRWSLVVFWFVALVLAILER HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWDYWITLV HHHHHHHCC >Mature Secondary Structure TLRPATAWYVLVAGVAGLAAALALTIEKIEILIDPTYVPSCSLNPVISCGSVMTTEQAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHCCCCHHHHHHHH AFGFPNSLIGIVAFTVVLVTGVLSVAGVQLPRWYWSGLAIGSLLGAVFVHWLIFQSLYRI HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALCPYCMVVWSVTIPLLVVSASIALRPLGSHRWARILYQWRWSLVVFWFVALVLAILER HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWDYWITLV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA