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The map label for this gene is lpqH [H]

Identifier: 169630342

GI number: 169630342

Start: 3298774

End: 3299247

Strand: Reverse

Name: lpqH [H]

Synonym: MAB_3261c

Alternate gene names: 169630342

Gene position: 3299247-3298774 (Counterclockwise)

Preceding gene: 169630343

Following gene: 169630341

Centisome position: 65.11

GC content: 65.19

Gene sequence:

>474_bases
ATGCGTTACGGCAGTGCAGTGGTGATGGGCGGCGCGGTCTTGGCTGGCGCATGTTTCGTTGGTTGCTCGTCGGGGGAAGG
CGTGCACCGAGACTCGTCTCAGACCAGTCAGCGGGTATCGAACTCGGCGAGCGTCACCCCTGCGGCCGGGCCTCGCGTCG
TCGTCAACGGGGCCGTCAGGACGGTCGAGAATCGCGTCGAGTGTGTTACTGCCGGGGAGATGACCTTTGTCAATATCGGC
AGCGATAGCGACGGCATTGCCGCCAGGCTGACGGCGGGCGAGAGCCCATCGCTGGAAAGCCTGACCCTCGGCGTCATCGA
TGGTCAGCCGGTGATCTATAGCCCGTCGAATGGCGGGGCCAAGCCTGAGGTCACGAAGTCGGGCCGGTCCTACAAGATTG
CCGGACCGGCAACGGCCGGCCTGAGCACGCCCGCCACCTTCGAGCTTGAGTTCACCTGCCCGGCCGGGAGATAA

Upstream 100 bases:

>100_bases
CCGCCAGATCAGTGATACCCGAACCTGGGATTTCTGGTGGGACTAGCGCCTGGCCGAACTATTCTGGGCCAGAACAATGC
GGGGTGATGGGAGGGTGTTA

Downstream 100 bases:

>100_bases
CAGAATCATGTTGAGCGCGTAACGCACTGTGCCGATTACGGCCCATAAGTCAGCATCGGTGTTCTCAAGGAAATACCCTG
GGTCCTATGACTACAAATGT

Product: lipoprotein LpqH precursor

Products: NA

Alternate protein names: 19 kDa lipoprotein antigen [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRYGSAVVMGGAVLAGACFVGCSSGEGVHRDSSQTSQRVSNSASVTPAAGPRVVVNGAVRTVENRVECVTAGEMTFVNIG
SDSDGIAARLTAGESPSLESLTLGVIDGQPVIYSPSNGGAKPEVTKSGRSYKIAGPATAGLSTPATFELEFTCPAGR

Sequences:

>Translated_157_residues
MRYGSAVVMGGAVLAGACFVGCSSGEGVHRDSSQTSQRVSNSASVTPAAGPRVVVNGAVRTVENRVECVTAGEMTFVNIG
SDSDGIAARLTAGESPSLESLTLGVIDGQPVIYSPSNGGAKPEVTKSGRSYKIAGPATAGLSTPATFELEFTCPAGR
>Mature_157_residues
MRYGSAVVMGGAVLAGACFVGCSSGEGVHRDSSQTSQRVSNSASVTPAAGPRVVVNGAVRTVENRVECVTAGEMTFVNIG
SDSDGIAARLTAGESPSLESLTLGVIDGQPVIYSPSNGGAKPEVTKSGRSYKIAGPATAGLSTPATFELEFTCPAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial 19 kDa antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008691 [H]

Pfam domain/function: PF05481 Myco_19_kDa [H]

EC number: NA

Molecular weight: Translated: 15769; Mature: 15769

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGSAVVMGGAVLAGACFVGCSSGEGVHRDSSQTSQRVSNSASVTPAAGPRVVVNGAVR
CCCCCEEEECCHHEECEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECHHE
TVENRVECVTAGEMTFVNIGSDSDGIAARLTAGESPSLESLTLGVIDGQPVIYSPSNGGA
ECCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCC
KPEVTKSGRSYKIAGPATAGLSTPATFELEFTCPAGR
CCCEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MRYGSAVVMGGAVLAGACFVGCSSGEGVHRDSSQTSQRVSNSASVTPAAGPRVVVNGAVR
CCCCCEEEECCHHEECEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECHHE
TVENRVECVTAGEMTFVNIGSDSDGIAARLTAGESPSLESLTLGVIDGQPVIYSPSNGGA
ECCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCC
KPEVTKSGRSYKIAGPATAGLSTPATFELEFTCPAGR
CCCEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2230723; 12788972 [H]