| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630262
Identifier: 169630262
GI number: 169630262
Start: 3225924
End: 3226880
Strand: Direct
Name: 169630262
Synonym: MAB_3180
Alternate gene names: NA
Gene position: 3225924-3226880 (Clockwise)
Preceding gene: 169630260
Following gene: 169630263
Centisome position: 63.66
GC content: 65.83
Gene sequence:
>957_bases ATGCAGAAGACGCCCGTGCCCATGACCAAGTCCTCGGCGGTGGCACTTACGTTTCTGTACGCGCTCGGCTATCCGATTGG CGCACTCTCGGTGTCTGCCATGACACCCATGTTGGTGTTGGTCGCGCGTTTCGCGCTCGCCGGAGCCATCTTGGCCACCT GGGCACTGATCGCGAGGGCGCTCTGGCCAACCGGTCGCACGTTGTGCCATGTCATCGTCGCCGGCCTACTCATGCAGGCG GTGCAGTTCTGCGCGTTGTACGAGGCCCTCGAACACGGAGCTCCCGCGGTATTGGGGGCCGTGGTCATCTCGATGAACCC CGTCGTCACCGCGGTACTCGCTGCCCTGTTCCTCGATGAGCGCCTCAATCGCTGGCGCCTCGTGGCTCTCGCGCTGGGCG TGGTGGCGGTACTTGCCGCATGCGCCAACCGGCTGCTCGCCACCGGTGGGATCGATACCGTATTGGTGCTTCTCCTCGTG GCGTTGTTGGGCCTGGCGGCAGGCGGGGTGTACCAACAGCGCTTCTGCGCCGATGTCGATTTTCGCGTCAACAGCACCAT CCAGAACCTGTCCGGACTGCTGCCGGCAGGCGCATTGGCGCTTCTGACCCCCAGCGCCGTCCACGATCCTTGGAAGGGTG CCGCTGCCGTGGCCGCGGTAGTGCTGCTCAACGCCACGCTGTGCACCTCGCTGTACGTGCGTTCGGTCAGCACATTCGGC GCGGCCGCAGTTGCGATGCTGTTCTGCGTCATTCCGGCCGTCGCCGGCCTGTTGTCCTGGCTCCTGCTCGGCCAGCGTGT CGACATCGGCATGGGGATCGGACTGGTCATAGGCGCTCTCGCCTGCTGGCTCAATGCCCGGGCAAGCCGATCCACCAAAT TGGCTGTGAAACCCCAGAGCCCCTCAATCGGGGCGGCGACCGCCGCGCCTACCCGTGAGCCGGCGGTGGCCAGCTAG
Upstream 100 bases:
>100_bases TTCAAACGCAGATTTCGTCTTGAGTGATAAGTATTAGCAATCAATTCTGATCAGCAATTATCGTTGGACACCACCTCCCG CACCGGCCACGATGGCAACC
Downstream 100 bases:
>100_bases CCTGGCTGCATGCGTGCCCTGTTACTTGGTGGTCTGACCCTGCTGGGAGCAATGCTCCTGGTCGCCGGATGCTCGAAGGG AGCCACGGTATCCCCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MQKTPVPMTKSSAVALTFLYALGYPIGALSVSAMTPMLVLVARFALAGAILATWALIARALWPTGRTLCHVIVAGLLMQA VQFCALYEALEHGAPAVLGAVVISMNPVVTAVLAALFLDERLNRWRLVALALGVVAVLAACANRLLATGGIDTVLVLLLV ALLGLAAGGVYQQRFCADVDFRVNSTIQNLSGLLPAGALALLTPSAVHDPWKGAAAVAAVVLLNATLCTSLYVRSVSTFG AAAVAMLFCVIPAVAGLLSWLLLGQRVDIGMGIGLVIGALACWLNARASRSTKLAVKPQSPSIGAATAAPTREPAVAS
Sequences:
>Translated_318_residues MQKTPVPMTKSSAVALTFLYALGYPIGALSVSAMTPMLVLVARFALAGAILATWALIARALWPTGRTLCHVIVAGLLMQA VQFCALYEALEHGAPAVLGAVVISMNPVVTAVLAALFLDERLNRWRLVALALGVVAVLAACANRLLATGGIDTVLVLLLV ALLGLAAGGVYQQRFCADVDFRVNSTIQNLSGLLPAGALALLTPSAVHDPWKGAAAVAAVVLLNATLCTSLYVRSVSTFG AAAVAMLFCVIPAVAGLLSWLLLGQRVDIGMGIGLVIGALACWLNARASRSTKLAVKPQSPSIGAATAAPTREPAVAS >Mature_318_residues MQKTPVPMTKSSAVALTFLYALGYPIGALSVSAMTPMLVLVARFALAGAILATWALIARALWPTGRTLCHVIVAGLLMQA VQFCALYEALEHGAPAVLGAVVISMNPVVTAVLAALFLDERLNRWRLVALALGVVAVLAACANRLLATGGIDTVLVLLLV ALLGLAAGGVYQQRFCADVDFRVNSTIQNLSGLLPAGALALLTPSAVHDPWKGAAAVAAVVLLNATLCTSLYVRSVSTFG AAAVAMLFCVIPAVAGLLSWLLLGQRVDIGMGIGLVIGALACWLNARASRSTKLAVKPQSPSIGAATAAPTREPAVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32655; Mature: 32655
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTPVPMTKSSAVALTFLYALGYPIGALSVSAMTPMLVLVARFALAGAILATWALIARA CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWPTGRTLCHVIVAGLLMQAVQFCALYEALEHGAPAVLGAVVISMNPVVTAVLAALFLDE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH RLNRWRLVALALGVVAVLAACANRLLATGGIDTVLVLLLVALLGLAAGGVYQQRFCADVD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC FRVNSTIQNLSGLLPAGALALLTPSAVHDPWKGAAAVAAVVLLNATLCTSLYVRSVSTFG CHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAVAMLFCVIPAVAGLLSWLLLGQRVDIGMGIGLVIGALACWLNARASRSTKLAVKPQS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCC PSIGAATAAPTREPAVAS CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQKTPVPMTKSSAVALTFLYALGYPIGALSVSAMTPMLVLVARFALAGAILATWALIARA CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWPTGRTLCHVIVAGLLMQAVQFCALYEALEHGAPAVLGAVVISMNPVVTAVLAALFLDE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH RLNRWRLVALALGVVAVLAACANRLLATGGIDTVLVLLLVALLGLAAGGVYQQRFCADVD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC FRVNSTIQNLSGLLPAGALALLTPSAVHDPWKGAAAVAAVVLLNATLCTSLYVRSVSTFG CHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAVAMLFCVIPAVAGLLSWLLLGQRVDIGMGIGLVIGALACWLNARASRSTKLAVKPQS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCC PSIGAATAAPTREPAVAS CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA