| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630244
Identifier: 169630244
GI number: 169630244
Start: 3208968
End: 3209597
Strand: Reverse
Name: 169630244
Synonym: MAB_3162c
Alternate gene names: NA
Gene position: 3209597-3208968 (Counterclockwise)
Preceding gene: 169630245
Following gene: 169630243
Centisome position: 63.34
GC content: 63.49
Gene sequence:
>630_bases GTGGGCTGCACCCAGACGGTGGCGGGTACCGCCACCTGGCCGGGTGCCCGCATCGCCCAGTCGCTACTGACCGCCGATGA GCTGCCCGAGGGCACCAAGTACGACAGGGTGGTCGCCGACCTGGGCCCGATGACGGTCAACAGCCAGAGCCAGCAGGTCG TCGTGGGCGGGATGCCGTCGAATCCGCAAGGCTGCGCGGACGGTTTGTCTCCCAGACTGGCCAATGCGGGCAAAGCCGGC CCAGAGAACACCGCGCGATACATCGCGCGGTTCAATGGCGCCAACATCATCGTCAGTTTGTTGCGCGACACGATCGACCT CACCAACGTGAAGGACGTGGCGACCCGTTGCGCCCAGTACGAGGTGTTCTTCGACACGAATTCGCCGGGAACACCGATGA CGACCGAACCTGTGCAGGGCGGGCCCGTCGGCGTGCTGACCTATAAGCAGACGATGATCATGCCCAAGGGCACCACCTCT CGGTACATGGCCTTTGCGAATGTCCGCGGGGTGGCCATGGTGGCAACCTCCTTCGATCTGCGTGACCCGTCGGTCAAGGC CACCGCCACGATGCCCCAGACTTTCCTGGACATTGTCGGGAAACAGGTCGACAAGATCGAAAGAACTTGA
Upstream 100 bases:
>100_bases CGCATCAGCCCCGTCATATCCGGTAATTGCGGCACGGGTCGAATAGCCTGTGCGGGTGCATCGGGGTCTAGTAGCTGTCG CAGTATCGGGATTGGCGCTT
Downstream 100 bases:
>100_bases CGGTCCGGATGAAAGTTTCCTGATAGGGCTGGTTAAAAGCCCAACCGGATGGGTTGTACTCAGGTACCGTGCGCCCATGC CCAAGGTCTTCGCGCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGCTQTVAGTATWPGARIAQSLLTADELPEGTKYDRVVADLGPMTVNSQSQQVVVGGMPSNPQGCADGLSPRLANAGKAG PENTARYIARFNGANIIVSLLRDTIDLTNVKDVATRCAQYEVFFDTNSPGTPMTTEPVQGGPVGVLTYKQTMIMPKGTTS RYMAFANVRGVAMVATSFDLRDPSVKATATMPQTFLDIVGKQVDKIERT
Sequences:
>Translated_209_residues MGCTQTVAGTATWPGARIAQSLLTADELPEGTKYDRVVADLGPMTVNSQSQQVVVGGMPSNPQGCADGLSPRLANAGKAG PENTARYIARFNGANIIVSLLRDTIDLTNVKDVATRCAQYEVFFDTNSPGTPMTTEPVQGGPVGVLTYKQTMIMPKGTTS RYMAFANVRGVAMVATSFDLRDPSVKATATMPQTFLDIVGKQVDKIERT >Mature_208_residues GCTQTVAGTATWPGARIAQSLLTADELPEGTKYDRVVADLGPMTVNSQSQQVVVGGMPSNPQGCADGLSPRLANAGKAGP ENTARYIARFNGANIIVSLLRDTIDLTNVKDVATRCAQYEVFFDTNSPGTPMTTEPVQGGPVGVLTYKQTMIMPKGTTSR YMAFANVRGVAMVATSFDLRDPSVKATATMPQTFLDIVGKQVDKIERT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22209; Mature: 22077
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCTQTVAGTATWPGARIAQSLLTADELPEGTKYDRVVADLGPMTVNSQSQQVVVGGMPS CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCCEEEEECCCC NPQGCADGLSPRLANAGKAGPENTARYIARFNGANIIVSLLRDTIDLTNVKDVATRCAQY CCCCHHHCCCCHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHEE EVFFDTNSPGTPMTTEPVQGGPVGVLTYKQTMIMPKGTTSRYMAFANVRGVAMVATSFDL EEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHEEEECCCCCEEEEEEECCC RDPSVKATATMPQTFLDIVGKQVDKIERT CCCCCEEEHHCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GCTQTVAGTATWPGARIAQSLLTADELPEGTKYDRVVADLGPMTVNSQSQQVVVGGMPS CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCCEEEEECCCC NPQGCADGLSPRLANAGKAGPENTARYIARFNGANIIVSLLRDTIDLTNVKDVATRCAQY CCCCHHHCCCCHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHEE EVFFDTNSPGTPMTTEPVQGGPVGVLTYKQTMIMPKGTTSRYMAFANVRGVAMVATSFDL EEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHEEEECCCCCEEEEEEECCC RDPSVKATATMPQTFLDIVGKQVDKIERT CCCCCEEEHHCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA