| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630236
Identifier: 169630236
GI number: 169630236
Start: 3199981
End: 3200619
Strand: Reverse
Name: 169630236
Synonym: MAB_3154c
Alternate gene names: NA
Gene position: 3200619-3199981 (Counterclockwise)
Preceding gene: 169630237
Following gene: 169630235
Centisome position: 63.16
GC content: 61.5
Gene sequence:
>639_bases ATGATTGCCCGCCTGATCACAACAGGTCTGTTGATGGCCGCGTTAGGGCTGACGGAAGCGGCCGCCGCCATCGCCGAGCC AATAGACATGGCGCCCCAGTTGTATTCCAGGACCACGCGGGACGGATGGCGTCTGGAAATCAGGTTGGACAACGAACGTG TGAATTCGGTGCCCAACCTGGCGGCCGCGACGAACTCGCGGGAGGCCTTCGTCACGCTCTCGGGAACGGCGACGGCGACC GGTGGTACCAATCCGATCACCGATAGTCTCTTTCTCATCGGTTATCAGCTTGGTTGCCAGTCCGACGTGTCATCGGGCTT GCAGATCGGCGGATCTGCCGGGGTCGCACCGTCGGTGAATGTCGGCGTACTTCCGTTACAAACTGTAGGCGTCGGCGGTA GCGCCGGAGTCAGCGGATTTGTCCAGACCGTGCTGCAGCCCGGCGTCATCGTCAATCTGCCACTGGGCAACATGGTGTTG TCGCGGGGGAATACCGGGGCCCTGGATTTGGACAACGTCCATCTGAAGGCGGACGCCTGCGGAGGGGATGTGACCATCCG GTCCTTCGCCTCCTTGCGGGTGTCCACCGAGACCGGTCATACCGAGTTTGCGATCTATGGCGACCCAATCAGGATCTAG
Upstream 100 bases:
>100_bases CATATCCGTCGATTGGACCGTTTCTTGTGGTGATTTCTGTCTGTGCATTGAGAACTCTGTTGTCTGCCAATCTCCGTCCG CGGGCCTCATGGTGGGTCTC
Downstream 100 bases:
>100_bases TAATGCGATCATTTTGTCTGACAATATTTTTGGCGCTCGCGGTGGTGTACTCGCCGGCCGCTGTGGCAGCGGCCGATCCG CTGCCGATAAACCCGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MIARLITTGLLMAALGLTEAAAAIAEPIDMAPQLYSRTTRDGWRLEIRLDNERVNSVPNLAAATNSREAFVTLSGTATAT GGTNPITDSLFLIGYQLGCQSDVSSGLQIGGSAGVAPSVNVGVLPLQTVGVGGSAGVSGFVQTVLQPGVIVNLPLGNMVL SRGNTGALDLDNVHLKADACGGDVTIRSFASLRVSTETGHTEFAIYGDPIRI
Sequences:
>Translated_212_residues MIARLITTGLLMAALGLTEAAAAIAEPIDMAPQLYSRTTRDGWRLEIRLDNERVNSVPNLAAATNSREAFVTLSGTATAT GGTNPITDSLFLIGYQLGCQSDVSSGLQIGGSAGVAPSVNVGVLPLQTVGVGGSAGVSGFVQTVLQPGVIVNLPLGNMVL SRGNTGALDLDNVHLKADACGGDVTIRSFASLRVSTETGHTEFAIYGDPIRI >Mature_212_residues MIARLITTGLLMAALGLTEAAAAIAEPIDMAPQLYSRTTRDGWRLEIRLDNERVNSVPNLAAATNSREAFVTLSGTATAT GGTNPITDSLFLIGYQLGCQSDVSSGLQIGGSAGVAPSVNVGVLPLQTVGVGGSAGVSGFVQTVLQPGVIVNLPLGNMVL SRGNTGALDLDNVHLKADACGGDVTIRSFASLRVSTETGHTEFAIYGDPIRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21751; Mature: 21751
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARLITTGLLMAALGLTEAAAAIAEPIDMAPQLYSRTTRDGWRLEIRLDNERVNSVPNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCHHHCCCCCC AAATNSREAFVTLSGTATATGGTNPITDSLFLIGYQLGCQSDVSSGLQIGGSAGVAPSVN EECCCCCEEEEEEECCEEECCCCCCCCCCEEEEEEECCCCHHHHCCEEECCCCCCCCCCC VGVLPLQTVGVGGSAGVSGFVQTVLQPGVIVNLPLGNMVLSRGNTGALDLDNVHLKADAC CCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCEEEECCCCCCEEECCEEEEEECC GGDVTIRSFASLRVSTETGHTEFAIYGDPIRI CCCEEEEEEEEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure MIARLITTGLLMAALGLTEAAAAIAEPIDMAPQLYSRTTRDGWRLEIRLDNERVNSVPNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCHHHCCCCCC AAATNSREAFVTLSGTATATGGTNPITDSLFLIGYQLGCQSDVSSGLQIGGSAGVAPSVN EECCCCCEEEEEEECCEEECCCCCCCCCCEEEEEEECCCCHHHHCCEEECCCCCCCCCCC VGVLPLQTVGVGGSAGVSGFVQTVLQPGVIVNLPLGNMVLSRGNTGALDLDNVHLKADAC CCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCEEEECCCCCCEEECCEEEEEECC GGDVTIRSFASLRVSTETGHTEFAIYGDPIRI CCCEEEEEEEEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA