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The map label for this gene is 169630233

Identifier: 169630233

GI number: 169630233

Start: 3198777

End: 3199400

Strand: Direct

Name: 169630233

Synonym: MAB_3151

Alternate gene names: NA

Gene position: 3198777-3199400 (Clockwise)

Preceding gene: 169630232

Following gene: 169630242

Centisome position: 63.13

GC content: 60.58

Gene sequence:

>624_bases
ATGACAAAAAACGCTGCGACGCAACGACAACGGACATCGGGGCGCCTCAACCGCTCATTAGATATCGCGATCCTCGAGGC
GGCCTTCGTCACACTCGCCGAGCAGGGCTACGACGCCATGAGCATGGATAACATCGCCGCGCGCGCCGGGGTGGGCAAAG
CTGCCATCTATCGACGCTGGTCCTCCAAGGCAGCGCTCACCGCGGATGCGATCTTGCATGGCCGGCCCTCACTGGGAAAA
CTGGATGAGGTACCGGACACCGGCAGCCTCCGAGGTGACTTGCATTCTCTCTACGAGGCAAGGGATTTCGGTGATGATCA
GGTACTGACGGGCAATCTGCTTGCCGGGATCATCGCCGAGGCCGTCAACGACCCGACTCTCGCAGCTGCCCTCGATGACC
TACTGGTGTCACAAACCCACAAACGGATGGAACTCGTATTCGCCCGCGCCGTCGAGCGCGGCGAGATAACACAGGGTCGC
GACCTGTCACTCGTCTATGACATTCCCTTGGGCCTGAGCCTGACCGCTGCCCTCAAAAGGACGGTGATCGACGAAACCTA
CATGCACCGAATGGTCGAGGAGGTGATCCTGCCCTTGGTGCAGGCTCCCACCACTCACACGTAG

Upstream 100 bases:

>100_bases
TGATTGTGCGCTCGTTCATGATGCCGTCTATTGCCGCCCTGCTCGGCCGCTGGTTCTGGTGGCCGCTGCGGGTCCGTACC
CACGGCACTGCGGGGGTGTG

Downstream 100 bases:

>100_bases
CGCAATGTCACGTCACGGACCGAATCCCCCGCTCACCTTCACGCCCCCGGCGGCTCCCGCACCTTCTACCCCGCCGGACA
TCCGCGGCCCACGCGCACCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTKNAATQRQRTSGRLNRSLDIAILEAAFVTLAEQGYDAMSMDNIAARAGVGKAAIYRRWSSKAALTADAILHGRPSLGK
LDEVPDTGSLRGDLHSLYEARDFGDDQVLTGNLLAGIIAEAVNDPTLAAALDDLLVSQTHKRMELVFARAVERGEITQGR
DLSLVYDIPLGLSLTAALKRTVIDETYMHRMVEEVILPLVQAPTTHT

Sequences:

>Translated_207_residues
MTKNAATQRQRTSGRLNRSLDIAILEAAFVTLAEQGYDAMSMDNIAARAGVGKAAIYRRWSSKAALTADAILHGRPSLGK
LDEVPDTGSLRGDLHSLYEARDFGDDQVLTGNLLAGIIAEAVNDPTLAAALDDLLVSQTHKRMELVFARAVERGEITQGR
DLSLVYDIPLGLSLTAALKRTVIDETYMHRMVEEVILPLVQAPTTHT
>Mature_206_residues
TKNAATQRQRTSGRLNRSLDIAILEAAFVTLAEQGYDAMSMDNIAARAGVGKAAIYRRWSSKAALTADAILHGRPSLGKL
DEVPDTGSLRGDLHSLYEARDFGDDQVLTGNLLAGIIAEAVNDPTLAAALDDLLVSQTHKRMELVFARAVERGEITQGRD
LSLVYDIPLGLSLTAALKRTVIDETYMHRMVEEVILPLVQAPTTHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22468; Mature: 22337

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNAATQRQRTSGRLNRSLDIAILEAAFVTLAEQGYDAMSMDNIAARAGVGKAAIYRRW
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
SSKAALTADAILHGRPSLGKLDEVPDTGSLRGDLHSLYEARDFGDDQVLTGNLLAGIIAE
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
AVNDPTLAAALDDLLVSQTHKRMELVFARAVERGEITQGRDLSLVYDIPLGLSLTAALKR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH
TVIDETYMHRMVEEVILPLVQAPTTHT
HHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKNAATQRQRTSGRLNRSLDIAILEAAFVTLAEQGYDAMSMDNIAARAGVGKAAIYRRW
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
SSKAALTADAILHGRPSLGKLDEVPDTGSLRGDLHSLYEARDFGDDQVLTGNLLAGIIAE
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
AVNDPTLAAALDDLLVSQTHKRMELVFARAVERGEITQGRDLSLVYDIPLGLSLTAALKR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH
TVIDETYMHRMVEEVILPLVQAPTTHT
HHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]