| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630219
Identifier: 169630219
GI number: 169630219
Start: 3176851
End: 3177321
Strand: Direct
Name: 169630219
Synonym: MAB_3137
Alternate gene names: NA
Gene position: 3176851-3177321 (Clockwise)
Preceding gene: 169630209
Following gene: 169630220
Centisome position: 62.69
GC content: 69.21
Gene sequence:
>471_bases ATGCTCAGAAGCCTGTCGCGCCGCGACCTGTTGATCGGCGGTGCCGCCCTCGGCGTCACCGCCGTGGCCGCCGCGTGCCA GCAGACACCTGATACCAAACCCGAGGAGGACGCCCTCCAAGCGCAGATCGACTTGGCGGTCCGGGACGCCGCCTCCGCTA CCGCGGCGGCAACCGCCAACGTCGAGCTGGCACCGGCGCTGAATACGATCGCCGGTATCCGCAGTGCCCATGTGGCGGCA CTGGCCAAAGAGCTCAAACGCATCCCCGGCGCCGCAGCGACCGTCCGCTCCACCCCGAGCACCACCACAGCGCCAGTCGC CCCGCCATCGGCCGACCAGGTCAAAAACCAGCTCAAGGACTCCGCACGCGCAGCAACCGACCTGGCGGCCAAGCAAAGCG GATACCGTGCCGGACTGCTGGCCTCTATCAGCGCGGCCTGCTCCTGCGCGGCCGAGGTGGATCTGCCATGA
Upstream 100 bases:
>100_bases GCTTGCACACACTAGTCGGACCTTCGTCCTGACCAGCACTCCACCTTACGCCCGGCGAGGGCTGTCATGCGGCAACCGCG CGCACTGGCAGGATGGGCGA
Downstream 100 bases:
>100_bases CAACGACCGAGCCCACGCCACAGCCGGCCTCGTCCGCCGACGACACCGCCTTGGCCAATGCCCTGGCCAACGAGCACGCG GCCATCTACTCCTACGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLRSLSRRDLLIGGAALGVTAVAAACQQTPDTKPEEDALQAQIDLAVRDAASATAAATANVELAPALNTIAGIRSAHVAA LAKELKRIPGAAATVRSTPSTTTAPVAPPSADQVKNQLKDSARAATDLAAKQSGYRAGLLASISAACSCAAEVDLP
Sequences:
>Translated_156_residues MLRSLSRRDLLIGGAALGVTAVAAACQQTPDTKPEEDALQAQIDLAVRDAASATAAATANVELAPALNTIAGIRSAHVAA LAKELKRIPGAAATVRSTPSTTTAPVAPPSADQVKNQLKDSARAATDLAAKQSGYRAGLLASISAACSCAAEVDLP >Mature_156_residues MLRSLSRRDLLIGGAALGVTAVAAACQQTPDTKPEEDALQAQIDLAVRDAASATAAATANVELAPALNTIAGIRSAHVAA LAKELKRIPGAAATVRSTPSTTTAPVAPPSADQVKNQLKDSARAATDLAAKQSGYRAGLLASISAACSCAAEVDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15611; Mature: 15611
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSLSRRDLLIGGAALGVTAVAAACQQTPDTKPEEDALQAQIDLAVRDAASATAAATAN CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VELAPALNTIAGIRSAHVAALAKELKRIPGAAATVRSTPSTTTAPVAPPSADQVKNQLKD EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHH SARAATDLAAKQSGYRAGLLASISAACSCAAEVDLP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRSLSRRDLLIGGAALGVTAVAAACQQTPDTKPEEDALQAQIDLAVRDAASATAAATAN CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VELAPALNTIAGIRSAHVAALAKELKRIPGAAATVRSTPSTTTAPVAPPSADQVKNQLKD EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHH SARAATDLAAKQSGYRAGLLASISAACSCAAEVDLP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA