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The map label for this gene is yeeO [H]

Identifier: 169630210

GI number: 169630210

Start: 3167030

End: 3168364

Strand: Reverse

Name: yeeO [H]

Synonym: MAB_3128c

Alternate gene names: 169630210

Gene position: 3168364-3167030 (Counterclockwise)

Preceding gene: 169630211

Following gene: 169630208

Centisome position: 62.53

GC content: 67.49

Gene sequence:

>1335_bases
TTGACTGACGCCACCGGCATCGCCGGAATGCCCGGCCTGGCTCGACGGATCATTTCGCTGGCGCTGCCCGCATTGGGCGT
CTTGGCAGCCGAACCTCTGTATCTGCTTTTCGACATCGCCATGGTGGGCCGCCTGGGAGCGGTCCCTTTGGCGGGATTGG
CTGTTGGGGGACTGGTCCTTTCGTTGGTGGGGACGCAGCTGACCTTTCTGTCGTACGGCACCACCGCGCGCGCCGCGCGG
CGATTCGGATCCGGCGACAGGCCTGGCGCGGTCCATGAGGGCGTGCAGGCCACCTGGCTGGCGCTGCTCATCGGAGCCGT
CGTGGTGCTCGTCGTGCATGCGGTGGCCGGGCCGGTGGTGCGCGCCATTGCCGCGGCGCCCGATGTCGCTGCTCAGGGCC
TGGGGTGGCTGCGTATCGCCATCTTCGCGGCACCGGCCATTCTGGTGTCCCTGGCGGGCAACGGCTGGATGCGGGGAGTT
CAGAATACGGTGCGGCCGTTGCGATATGTCATCGCCGGTTTTGCCGTGTCGGCCGTACTGTGCCCGGTGCTGATCTACGG
GCTGGCGGGTGTGCCGCGGATGGGGTTGGCCGGTTCGGCGGTGGCCAATCTGGTGGGGCAGTGGCTGGCCGCGATCCTCT
TCTTGCGTGCTCTGCACGCCGAGCATGCGCCGCTTCGGACGGACCGTGCGGTGCTGCGCGCGCAGCTGGTGCTGGCGCGC
GATCTGCTGGTGCGCAGTCTGGCCTTTCAAGCGTGCTTCATCAGTGCTGCCGCGGTAGCGGCCCGGTTTGGGGCGGCGGC
ATTGGCCGCCCATCAGGTGGTCCTGCAGATGTGGAGTTTCCTTGCACTGGTGCTCGACTCGCTGGCCATCGCGGCTCAAA
CCCTGGTAGGTGCGGCATTGGGCGCGGGCCGGGTGCCCGAGGCCAAGTCGGTGGCGTGGCGTGTGAGCATCTTCTCGCTG
GGGTTCGCGGTGCTGTTGGCGGGCATACTTGCCCTCGGTGCGCCGGTGCTGCCGAGGCTGTTTACCTCCGACGCCGCCGT
GCTGCATGAAATGCGGGTGCCATGGTGGTTCCTGGTGTGTCAGTTGCCGATATCGGGTCTGGTGTTCGCGCTGGACGGGG
TGCTGCTGGGAGCTGCCGATGCGCGGTTCATGCGCAATGCCACCATGATCAGCGCATTGTGCGGATTCCTGCCGAGCGTG
TGGTTGGCACTGGTTTTCGGGTGGGGGCTTGCCGGGATCTGGTGCGGACTCACCCTTTTCCTGGTCCTGCGGCTGGTGTT
GGTCGGTTGGCGCGCACTGTCCGGAGGATGGGCCGTGCCGGGCACTGGCTCCTGA

Upstream 100 bases:

>100_bases
GCGGTAGCGGCCACTTTCGACGGTGGTGGACATCGGCTGGCAGCCGGGTTCTCGGCGACGGGTCCGGTCGATGACGTAGT
GGCGGCGCTGGTTCGCGCCC

Downstream 100 bases:

>100_bases
TCAGGACGTCTGCGGATATTGGGGGTAGGGCGGCTGGGGATACCCGACCGGTGGATAAGCCTGGTATGCCGGCGGCTGTG
CTGCCAAACGCCGAATCTGG

Product: DNA-damage-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTDATGIAGMPGLARRIISLALPALGVLAAEPLYLLFDIAMVGRLGAVPLAGLAVGGLVLSLVGTQLTFLSYGTTARAAR
RFGSGDRPGAVHEGVQATWLALLIGAVVVLVVHAVAGPVVRAIAAAPDVAAQGLGWLRIAIFAAPAILVSLAGNGWMRGV
QNTVRPLRYVIAGFAVSAVLCPVLIYGLAGVPRMGLAGSAVANLVGQWLAAILFLRALHAEHAPLRTDRAVLRAQLVLAR
DLLVRSLAFQACFISAAAVAARFGAAALAAHQVVLQMWSFLALVLDSLAIAAQTLVGAALGAGRVPEAKSVAWRVSIFSL
GFAVLLAGILALGAPVLPRLFTSDAAVLHEMRVPWWFLVCQLPISGLVFALDGVLLGAADARFMRNATMISALCGFLPSV
WLALVFGWGLAGIWCGLTLFLVLRLVLVGWRALSGGWAVPGTGS

Sequences:

>Translated_444_residues
MTDATGIAGMPGLARRIISLALPALGVLAAEPLYLLFDIAMVGRLGAVPLAGLAVGGLVLSLVGTQLTFLSYGTTARAAR
RFGSGDRPGAVHEGVQATWLALLIGAVVVLVVHAVAGPVVRAIAAAPDVAAQGLGWLRIAIFAAPAILVSLAGNGWMRGV
QNTVRPLRYVIAGFAVSAVLCPVLIYGLAGVPRMGLAGSAVANLVGQWLAAILFLRALHAEHAPLRTDRAVLRAQLVLAR
DLLVRSLAFQACFISAAAVAARFGAAALAAHQVVLQMWSFLALVLDSLAIAAQTLVGAALGAGRVPEAKSVAWRVSIFSL
GFAVLLAGILALGAPVLPRLFTSDAAVLHEMRVPWWFLVCQLPISGLVFALDGVLLGAADARFMRNATMISALCGFLPSV
WLALVFGWGLAGIWCGLTLFLVLRLVLVGWRALSGGWAVPGTGS
>Mature_443_residues
TDATGIAGMPGLARRIISLALPALGVLAAEPLYLLFDIAMVGRLGAVPLAGLAVGGLVLSLVGTQLTFLSYGTTARAARR
FGSGDRPGAVHEGVQATWLALLIGAVVVLVVHAVAGPVVRAIAAAPDVAAQGLGWLRIAIFAAPAILVSLAGNGWMRGVQ
NTVRPLRYVIAGFAVSAVLCPVLIYGLAGVPRMGLAGSAVANLVGQWLAAILFLRALHAEHAPLRTDRAVLRAQLVLARD
LLVRSLAFQACFISAAAVAARFGAAALAAHQVVLQMWSFLALVLDSLAIAAQTLVGAALGAGRVPEAKSVAWRVSIFSLG
FAVLLAGILALGAPVLPRLFTSDAAVLHEMRVPWWFLVCQLPISGLVFALDGVLLGAADARFMRNATMISALCGFLPSVW
LALVFGWGLAGIWCGLTLFLVLRLVLVGWRALSGGWAVPGTGS

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI226510954, Length=443, Percent_Identity=24.3792325056433, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790477, Length=422, Percent_Identity=30.3317535545024, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI48994890, Length=322, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 45904; Mature: 45773

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATGIAGMPGLARRIISLALPALGVLAAEPLYLLFDIAMVGRLGAVPLAGLAVGGLVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLVGTQLTFLSYGTTARAARRFGSGDRPGAVHEGVQATWLALLIGAVVVLVVHAVAGPVV
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIAAAPDVAAQGLGWLRIAIFAAPAILVSLAGNGWMRGVQNTVRPLRYVIAGFAVSAVL
HHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CPVLIYGLAGVPRMGLAGSAVANLVGQWLAAILFLRALHAEHAPLRTDRAVLRAQLVLAR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DLLVRSLAFQACFISAAAVAARFGAAALAAHQVVLQMWSFLALVLDSLAIAAQTLVGAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGRVPEAKSVAWRVSIFSLGFAVLLAGILALGAPVLPRLFTSDAAVLHEMRVPWWFLVC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
QLPISGLVFALDGVLLGAADARFMRNATMISALCGFLPSVWLALVFGWGLAGIWCGLTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLRLVLVGWRALSGGWAVPGTGS
HHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDATGIAGMPGLARRIISLALPALGVLAAEPLYLLFDIAMVGRLGAVPLAGLAVGGLVL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLVGTQLTFLSYGTTARAARRFGSGDRPGAVHEGVQATWLALLIGAVVVLVVHAVAGPVV
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIAAAPDVAAQGLGWLRIAIFAAPAILVSLAGNGWMRGVQNTVRPLRYVIAGFAVSAVL
HHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CPVLIYGLAGVPRMGLAGSAVANLVGQWLAAILFLRALHAEHAPLRTDRAVLRAQLVLAR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DLLVRSLAFQACFISAAAVAARFGAAALAAHQVVLQMWSFLALVLDSLAIAAQTLVGAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGRVPEAKSVAWRVSIFSLGFAVLLAGILALGAPVLPRLFTSDAAVLHEMRVPWWFLVC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
QLPISGLVFALDGVLLGAADARFMRNATMISALCGFLPSVWLALVFGWGLAGIWCGLTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLRLVLVGWRALSGGWAVPGTGS
HHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]